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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP069691.1
Sequence
Nucleotide Information
Accession
NZ_CP069691.1
Description
Escherichia coli O176:H45 strain MIN9 plasmid pMUB-MIN9-9, complete sequence
Source
refseq
Topology
circular
Length
1552 bp
GC Content
0.52 %
Created at NCBI
March 26, 2021
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (2810408)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Assembly
Genome Data Information
Accession
GCF_017570665.1
Assembly Coverage
100
Biosample
Curated Collection Information
Accession
17831482
PLASMID INFORMATION
Genotype
ST-6856
GEOGRAPHICAL INFORMATION
Original Query
53.12523570N;23.15905989E
Original Query Type
coordinates
Coordinates (Lat/Lon)
53.13/23.16
Address
Uniwersytecki Szpital Kliniczny, 24A, Marii Skłodowskiej-Curie, Osiedle Skłodowskiej, Piaski, Białystok, Podlaskie Voivodeship, 15-276, Poland
ECOSYSTEM
Original Query
Homo sapiens
Classification
host_associated
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
NZ_CP069690.1
NZ_CP069689.1
NZ_CP069688.1
NZ_CP069687.1
NZ_CP069686.1
NZ_CP069685.1
NZ_CP069684.1
NZ_CP069683.1
Similar Plasmids
based on Mash distance
NZ_CP081198.1
See Comparison
NZ_CP080132.1
See Comparison
NZ_OU342910.1
See Comparison
NZ_OU342904.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NZ_CP014317.1
See Comparison
NZ_CP011143.1
See Comparison
NC_022661.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_CP023858.1
See Comparison
NZ_CP026493.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_CP082066.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_OX637967.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_CP139814.1
See Comparison
CP058006.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP057795.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_LR890470.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890409.1
See Comparison
NZ_OY839921.1
See Comparison
CP057704.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_CP060428.1
See Comparison
CP058045.1
See Comparison
CP058051.1
See Comparison
NZ_CP058062.1
See Comparison
CP099158.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
See Comparison
CP099165.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
CP098995.1
See Comparison
NZ_CP116187.1
See Comparison
AP026470.1
See Comparison
NZ_OX030707.1
See Comparison
NZ_OW968115.1
See Comparison
NZ_CP081198.1
See Comparison
OW848867.1
See Comparison
OW848849.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_CP055035.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_CP080132.1
See Comparison
NZ_OU342910.1
See Comparison
NZ_OU342904.1
See Comparison
NZ_CP026493.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NZ_CP014317.1
See Comparison
NZ_CP011143.1
See Comparison
NC_022661.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_CP023858.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_CP082066.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_OX637967.1
See Comparison
NZ_CP063524.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_CP139814.1
See Comparison
NZ_OY839921.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_CP058062.1
See Comparison
CP058006.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP057795.1
See Comparison
CP057704.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_LR890470.1
See Comparison
NZ_CP060428.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890409.1
See Comparison
OW848867.1
See Comparison
CP058045.1
See Comparison
CP058051.1
See Comparison
CP099158.1
See Comparison
CP099165.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP116187.1
See Comparison
AP026470.1
See Comparison
NZ_OX030707.1
See Comparison
NZ_OW968115.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
CP098995.1
See Comparison
OW848849.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_CP055035.1
See Comparison
NZ_CP081198.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP080132.1
See Comparison
NZ_OU342910.1
See Comparison
NZ_OU342904.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NZ_CP011143.1
See Comparison
NZ_CP014317.1
See Comparison
NZ_CP023858.1
See Comparison
NC_022661.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_CP026493.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_CP082066.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_OX637967.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_CP139814.1
See Comparison
NZ_OY839921.1
See Comparison
CP058006.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP057795.1
See Comparison
CP057704.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890409.1
See Comparison
NZ_LR890470.1
See Comparison
NZ_OW968115.1
See Comparison
NZ_CP060428.1
See Comparison
CP058045.1
See Comparison
CP058051.1
See Comparison
NZ_CP058062.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
CP098995.1
See Comparison
CP099158.1
See Comparison
CP099165.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP116187.1
See Comparison
AP026470.1
See Comparison
OW848867.1
See Comparison
NZ_OX030707.1
See Comparison
OW848849.1
See Comparison
NZ_CP081198.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_CP055035.1
See Comparison
NZ_CP080132.1
See Comparison
NZ_OU342910.1
See Comparison
NZ_OU342904.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NZ_CP014317.1
See Comparison
NC_022661.1
See Comparison
NZ_CP011143.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_OX637967.1
See Comparison
NZ_CP082066.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_CP023858.1
See Comparison
NZ_CP026493.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_CP139814.1
See Comparison
NZ_OY839921.1
See Comparison
CP058006.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP057795.1
See Comparison
CP057704.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_LR890409.1
See Comparison
NZ_CP057108.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
CP098995.1
See Comparison
CP099158.1
See Comparison
CP099165.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_LR890470.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_CP060428.1
See Comparison
CP058045.1
See Comparison
CP058051.1
See Comparison
NZ_CP058062.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP116187.1
See Comparison
AP026470.1
See Comparison
OW848867.1
See Comparison
NZ_OX030707.1
See Comparison
NZ_OW968115.1
See Comparison
OW848849.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP055035.1
See Comparison
NZ_CP081198.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_CP080132.1
See Comparison
NZ_OU342910.1
See Comparison
NZ_OU342904.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_CP011143.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NZ_CP014317.1
See Comparison
NC_022661.1
See Comparison
NZ_CP023858.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_CP026493.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_CP082066.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_OX637967.1
See Comparison
CP058045.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_CP060428.1
See Comparison
NZ_CP139814.1
See Comparison
NZ_OY839921.1
See Comparison
CP058006.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP057795.1
See Comparison
CP057704.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_LR890470.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890409.1
See Comparison
CP058051.1
See Comparison
NZ_CP058062.1
See Comparison
CP098995.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
See Comparison
CP099158.1
See Comparison
CP099165.1
See Comparison
AP026470.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP116187.1
See Comparison
NZ_OX030707.1
See Comparison
NZ_OW968115.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_CP081198.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_CP047018.1
See Comparison
OW848867.1
See Comparison
OW848849.1
See Comparison
NZ_CP055035.1
See Comparison
NZ_CP080132.1
See Comparison
NZ_OU342910.1
See Comparison
NZ_OU342904.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NC_022661.1
See Comparison
NZ_CP069691.1
See Comparison
NZ_CP014317.1
See Comparison
NZ_CP011143.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_CP023858.1
See Comparison
NZ_CP026493.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_CP082066.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_OX637967.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_CP139814.1
See Comparison
NZ_OY839921.1
See Comparison
CP058006.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP057795.1
See Comparison
CP057704.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_CP099363.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_CP069592.1
See Comparison
CP058045.1
See Comparison
CP058051.1
See Comparison
NZ_CP058062.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_LR890470.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890409.1
See Comparison
NZ_CP060428.1
See Comparison
CP098983.1
See Comparison
CP098995.1
See Comparison
CP099158.1
See Comparison
CP099165.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP116187.1
See Comparison
AP026470.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_OX030707.1
See Comparison
NZ_OW968115.1
See Comparison
OW848867.1
See Comparison
OW848849.1
See Comparison
NZ_CP055035.1
See Comparison
Identical Plasmids
100% Sequence Identity
NZ_LR890409.1
Sequence
Accession
:
NZ_LR890409.1
Description
: Escherichia coli strain MSB1_7C isolate MSB1_7C plasmid 5, complete sequence
Source
: refseq
Created at NCBI
: Oct. 30, 2020
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
4089319
GEOGRAPHICAL INFORMATION
Original Query
: Australia
Original Query Type
: name
Address
: Australia
Coordinates
(Lat/Lon): -24.78/134.76
ECOSYSTEM
Original Query
: Homo sapiens,rectal swab
Classification
: gastrointestinal_system,host_associated,rectal
Host-associated Taxon
:
Homo sapiens (
9606
)
Visualization
PNG
JSON
NZ_LR890316.1
Sequence
Accession
:
NZ_LR890316.1
Description
: Klebsiella oxytoca strain MSB1_10D isolate MSB1_10D plasmid 5, complete sequence
Source
: refseq
Created at NCBI
: Oct. 30, 2020
Host Taxonomy
Assigned Host
:
Klebsiella oxytoca (571)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Klebsiella (570)
Species
:
Klebsiella_oxytoca (571)
Strain
:
Biosample
Accession
:
4089331
GEOGRAPHICAL INFORMATION
Original Query
: Australia
Original Query Type
: name
Address
: Australia
Coordinates
(Lat/Lon): -24.78/134.76
ECOSYSTEM
Original Query
: Homo sapiens,rectal swab
Classification
: gastrointestinal_system,host_associated,rectal
Host-associated Taxon
:
Homo sapiens (
9606
)
Visualization
PNG
JSON
NZ_LR890306.1
Sequence
Accession
:
NZ_LR890306.1
Description
: Escherichia coli strain MSB1_3B isolate MSB1_3B plasmid 8, complete sequence
Source
: refseq
Created at NCBI
: Oct. 30, 2020
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
4106457
GEOGRAPHICAL INFORMATION
Original Query
: Australia
Original Query Type
: name
Address
: Australia
Coordinates
(Lat/Lon): -24.78/134.76
ECOSYSTEM
Original Query
: Homo sapiens,rectal swab
Classification
: gastrointestinal_system,host_associated,rectal
Host-associated Taxon
:
Homo sapiens (
9606
)
Visualization
PNG
JSON
NZ_LR890470.1
Sequence
Accession
:
NZ_LR890470.1
Description
: Escherichia coli strain MSB1_7A isolate MSB1_7A plasmid 5, complete sequence
Source
: refseq
Created at NCBI
: Oct. 30, 2020
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
4106453
GEOGRAPHICAL INFORMATION
Original Query
: Australia
Original Query Type
: name
Address
: Australia
Coordinates
(Lat/Lon): -24.78/134.76
ECOSYSTEM
Original Query
: Homo sapiens,rectal swab
Classification
: gastrointestinal_system,host_associated,rectal
Host-associated Taxon
:
Homo sapiens (
9606
)
Visualization
PNG
JSON
NZ_CP125106.1
Sequence
Accession
:
NZ_CP125106.1
Description
: Klebsiella pneumoniae strain 303 plasmid unnamed7, complete sequence
Source
: refseq
Created at NCBI
: April 5, 2024
Host Taxonomy
Assigned Host
:
Klebsiella pneumoniae (573)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Klebsiella (570)
Species
:
Klebsiella_pneumoniae (573)
Strain
:
Biosample
Accession
:
33790404
GEOGRAPHICAL INFORMATION
Original Query
: Russia
Original Query Type
: name
Address
: Russia
Coordinates
(Lat/Lon): 64.69/97.75
ECOSYSTEM
Original Query
: None
Classification
: None
Host-associated Taxon
:
Visualization
PNG
JSON
NZ_OX637967.1
Sequence
Accession
:
NZ_OX637967.1
Description
: Escherichia coli O25b:H4-ST131 isolate 46 plasmid P3
Source
: refseq
Created at NCBI
: May 31, 2023
Host Taxonomy
Assigned Host
:
Escherichia coli (941322)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
32905209
GEOGRAPHICAL INFORMATION
Original Query
: Armenia
Original Query Type
: name
Address
: Armenia
Coordinates
(Lat/Lon): 40.77/44.67
ECOSYSTEM
Original Query
: Homo sapiens,Urinary tract
Classification
: host_associated,urinary_system
Host-associated Taxon
:
Homo sapiens (
9606
)
DISEASE
Original Query
: diseased
DOID/SYMP
:
Disease
(
DOID:4
)
A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
Visualization
PNG
JSON
NZ_CP123028.1
Sequence
Accession
:
NZ_CP123028.1
Description
: Escherichia coli strain 20-16 plasmid p20-16P4, complete sequence
Source
: refseq
Created at NCBI
: April 24, 2023
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
34164624
GEOGRAPHICAL INFORMATION
Original Query
: China,Jiangsu
Original Query Type
: name
Address
: China,Jiangsu
Coordinates
(Lat/Lon): 33.00/120.00
ECOSYSTEM
Original Query
: Homo sapiens,single cell,urine
Classification
: cell_culture,host_associated,urinary_system
Host-associated Taxon
:
Homo sapiens (
9606
)
Visualization
PNG
JSON
NZ_OX030707.1
Sequence
Accession
:
NZ_OX030707.1
Description
: Escherichia coli isolate 131 plasmid P6, complete sequence
Source
: refseq
Created at NCBI
: June 2, 2022
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
22316865
GEOGRAPHICAL INFORMATION
Original Query
: Spain
Original Query Type
: name
Address
: Spain
Coordinates
(Lat/Lon): 39.33/-4.84
ECOSYSTEM
Original Query
: Homo sapiens,Hospital Universitario Central de Asturias (Oviedo)
Classification
: anthropogenic,hospital,host_associated,location
Host-associated Taxon
:
Homo sapiens (
9606
)
DISEASE
Original Query
: diseased
DOID/SYMP
:
Disease
(
DOID:4
)
A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
Visualization
PNG
JSON
NZ_CP081198.1
Sequence
Accession
:
NZ_CP081198.1
Description
: Escherichia coli strain EC1722-1 plasmid unnamed7, complete sequence
Source
: refseq
Created at NCBI
: Aug. 22, 2021
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
20693749
GEOGRAPHICAL INFORMATION
Original Query
: China,zhejiang
Original Query Type
: name
Address
: China,zhejiang
Coordinates
(Lat/Lon): 29.00/120.00
ECOSYSTEM
Original Query
: Homo sapiens,metagenomic assembly,Child feces
Classification
: fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Homo sapiens (
9606
)
Visualization
PNG
JSON
NZ_CP057482.1
Sequence
Accession
:
NZ_CP057482.1
Description
: Escherichia fergusonii strain RHB25-C10 plasmid pRHB25-C10_2, complete sequence
Source
: refseq
Created at NCBI
: Aug. 4, 2020
Host Taxonomy
Assigned Host
:
Escherichia fergusonii (564)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_fergusonii (564)
Strain
:
Biosample
Accession
:
15148237
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled cattle faecal samples collected from floor of farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Bos taurus (
9913
)
Visualization
PNG
JSON
NZ_CP057363.1
Sequence
Accession
:
NZ_CP057363.1
Description
: Escherichia fergusonii strain RHB28-C21 plasmid pRHB28-C21_7, complete sequence
Source
: refseq
Created at NCBI
: Aug. 4, 2020
Host Taxonomy
Assigned Host
:
Escherichia fergusonii (564)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_fergusonii (564)
Strain
:
Biosample
Accession
:
15148274
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled pig faecal samples collected from floor of farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Sus scrofa (
9823
)
Visualization
PNG
JSON
NZ_CP057108.1
Sequence
Accession
:
NZ_CP057108.1
Description
: Escherichia fergusonii strain RHB38-C01 plasmid pRHB38-C01_5, complete sequence
Source
: refseq
Created at NCBI
: Aug. 3, 2020
Host Taxonomy
Assigned Host
:
Escherichia fergusonii (564)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_fergusonii (564)
Strain
:
Biosample
Accession
:
15148383
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled pig faecal samples collected from floor of farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Sus scrofa (
9823
)
Visualization
PNG
JSON
NZ_CP055607.1
Sequence
Accession
:
NZ_CP055607.1
Description
: Escherichia fergusonii strain RHB41-C23 plasmid pRHB41-C23_9, complete sequence
Source
: refseq
Created at NCBI
: July 29, 2020
Host Taxonomy
Assigned Host
:
Escherichia fergusonii (564)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_fergusonii (564)
Strain
:
Biosample
Accession
:
15148431
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled pig faecal samples collected from floor of farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Sus scrofa (
9823
)
Visualization
PNG
JSON
NZ_CP125153.1
Sequence
Accession
:
NZ_CP125153.1
Description
: Klebsiella pneumoniae strain 180 plasmid unnamed8, complete sequence
Source
: refseq
Created at NCBI
: April 5, 2024
Host Taxonomy
Assigned Host
:
Klebsiella pneumoniae (573)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Klebsiella (570)
Species
:
Klebsiella_pneumoniae (573)
Strain
:
Biosample
Accession
:
33790398
GEOGRAPHICAL INFORMATION
Original Query
: Russia
Original Query Type
: name
Address
: Russia
Coordinates
(Lat/Lon): 64.69/97.75
ECOSYSTEM
Original Query
: None
Classification
: None
Host-associated Taxon
:
Visualization
PNG
JSON
CP098983.1
Sequence
Accession
:
CP098983.1
Description
: Escherichia coli strain RHB46-C16 plasmid unnamed4, complete sequence
Source
: insd
Created at NCBI
: April 13, 2023
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
15488712
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled faeces sample collected from floor of poultry farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Gallus gallus (
9031
)
Visualization
PNG
JSON
CP099158.1
Sequence
Accession
:
CP099158.1
Description
: Escherichia coli strain RHB28-E3-C06 plasmid unnamed6, complete sequence
Source
: insd
Created at NCBI
: April 13, 2023
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
15488599
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled sediment sample collected from floor of pig farm
Classification
: anthropogenic,cell_culture,farm,sediment
Host-associated Taxon
:
Visualization
PNG
JSON
CP099165.1
Sequence
Accession
:
CP099165.1
Description
: Escherichia coli strain RHB28-E3-C03 plasmid unnamed6, complete sequence
Source
: insd
Created at NCBI
: April 13, 2023
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
15488598
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled sediment sample collected from floor of pig farm
Classification
: anthropogenic,cell_culture,farm,sediment
Host-associated Taxon
:
Visualization
PNG
JSON
OW848849.1
Sequence
Accession
:
OW848849.1
Description
: Klebsiella pneumoniae isolate 405 genome assembly, plasmid: P4
Source
: insd
Created at NCBI
: May 14, 2022
Host Taxonomy
Assigned Host
:
Klebsiella pneumoniae (573)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Klebsiella (570)
Species
:
Klebsiella_pneumoniae (573)
Strain
:
Biosample
Accession
:
22316579
GEOGRAPHICAL INFORMATION
Original Query
: Spain
Original Query Type
: name
Address
: Spain
Coordinates
(Lat/Lon): 39.33/-4.84
ECOSYSTEM
Original Query
: Homo sapiens,Hospital Universitario Gregorio Maranon (Madrid)
Classification
: host_associated,location
Host-associated Taxon
:
Homo sapiens (
9606
)
DISEASE
Original Query
: diseased
DOID/SYMP
:
Disease
(
DOID:4
)
A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
Visualization
PNG
JSON
CP058051.1
Sequence
Accession
:
CP058051.1
Description
: Escherichia coli strain RHB03-C05 plasmid pRHB03-C05_6, complete sequence
Source
: insd
Created at NCBI
: Aug. 7, 2020
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
15147975
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled pig faecal samples collected from floor of farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Sus scrofa (
9823
)
Visualization
PNG
JSON
CP058045.1
Sequence
Accession
:
CP058045.1
Description
: Escherichia coli strain RHB03-C06 plasmid pRHB03-C06_6, complete sequence
Source
: insd
Created at NCBI
: Aug. 7, 2020
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
15147976
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled pig faecal samples collected from floor of farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Sus scrofa (
9823
)
Visualization
PNG
JSON
CP058006.1
Sequence
Accession
:
CP058006.1
Description
: Escherichia coli strain RHB05-C01 plasmid pRHB05-C01_3, complete sequence
Source
: insd
Created at NCBI
: July 30, 2020
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
15147995
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled sheep faecal samples collected from floor of farm
Classification
: anthropogenic,cell_culture,farm,soil
Host-associated Taxon
:
Visualization
PNG
JSON
CP057823.1
Sequence
Accession
:
CP057823.1
Description
: Escherichia coli strain RHB14-C14 plasmid pRHB14-C14_6, complete sequence
Source
: insd
Created at NCBI
: July 29, 2020
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
15148110
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled pig faecal samples collected from floor of farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Sus scrofa (
9823
)
Visualization
PNG
JSON
CP057795.1
Sequence
Accession
:
CP057795.1
Description
: Escherichia coli strain RHB14-C23 plasmid pRHB14-C23_6, complete sequence
Source
: insd
Created at NCBI
: July 29, 2020
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
15148116
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled pig faecal samples collected from floor of farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Sus scrofa (
9823
)
Visualization
PNG
JSON
CP057704.1
Sequence
Accession
:
CP057704.1
Description
: Escherichia coli strain RHB17-C09 plasmid pRHB17-C09_9, complete sequence
Source
: insd
Created at NCBI
: July 29, 2020
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
15148144
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Pooled pig faecal samples collected from floor of farm
Classification
: cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Sus scrofa (
9823
)
Visualization
PNG
JSON
CP056652.1
Sequence
Accession
:
CP056652.1
Description
: Enterobacter hormaechei strain RHBSTW-00218 plasmid pRHBSTW-00218_4, complete sequence
Source
: insd
Created at NCBI
: July 27, 2020
Host Taxonomy
Assigned Host
:
Enterobacter hormaechei (158836)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Enterobacter (547)
Species
:
Enterobacter_hormaechei (158836)
Strain
:
Biosample
Accession
:
15148547
GEOGRAPHICAL INFORMATION
Original Query
: United Kingdom
Original Query Type
: name
Address
: United Kingdom
Coordinates
(Lat/Lon): 54.70/-3.28
ECOSYSTEM
Original Query
: culture,Wastewater influent sample
Classification
: cell_culture,wastewater
Host-associated Taxon
:
Visualization
PNG
JSON
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore