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v. 2024_05_31_v2
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Typing
Plasmid NZ_OW968115.1
Sequence
Nucleotide Information
Accession
NZ_OW968115.1
Description
Escherichia coli isolate 602 plasmid P4, complete sequence
Source
refseq
Topology
circular
Length
1552 bp
GC Content
0.52 %
Created at NCBI
May 20, 2022
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (562)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Assembly
Genome Data Information
Accession
GCF_905330295.2
Assembly Coverage
365
Biosample
Curated Collection Information
Accession
22316794
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
Spain
Original Query Type
name
Coordinates (Lat/Lon)
39.33/-4.84
Address
Spain
ECOSYSTEM
Original Query
Homo sapiens,Hospital Universitario La Paz (Madrid)
Classification
anthropogenic,hospital,host_associated,location
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
diseased
DOID/SYMP
Disease
(
DOID:4
)
A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_OW968114.1
NZ_OW968113.1
NZ_OW968112.1
Similar Plasmids
based on Mash distance
NZ_CP055035.1
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NZ_CP081198.1
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NZ_CP080132.1
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NZ_OU342910.1
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NZ_OU342904.1
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NZ_CP075661.1
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NZ_CP047018.1
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NZ_CP069655.1
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NZ_CP069681.1
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NZ_CP069675.1
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NZ_CP069691.1
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NZ_CP014317.1
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NZ_CP011143.1
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NC_022661.1
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NZ_CP045286.1
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NZ_CP023858.1
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NZ_CP026493.1
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NZ_OY757131.1
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NZ_OY757118.1
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NZ_OY754363.1
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NZ_CP133459.1
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NZ_CP115349.1
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NZ_AP027211.1
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NZ_OX637967.1
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NZ_CP123028.1
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CP058006.1
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NZ_CP125153.1
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NZ_CP125106.1
See Comparison
NZ_OY839921.1
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NZ_CP055607.1
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CP057823.1
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CP057795.1
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CP057704.1
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CP056984.1
See Comparison
CP057428.1
See Comparison
CP056652.1
See Comparison
CP057184.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_LR890470.1
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NZ_LR890341.1
See Comparison
NZ_LR890409.1
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NZ_CP080132.1
See Comparison
CP058045.1
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CP058051.1
See Comparison
NZ_CP058062.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
CP098995.1
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CP099158.1
See Comparison
CP099165.1
See Comparison
NZ_CP116187.1
See Comparison
OW848867.1
See Comparison
OW848849.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_CP055035.1
See Comparison
NZ_CP081198.1
See Comparison
CP063735.1
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NZ_CP060428.1
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NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
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NZ_CP116151.1
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NZ_OX030707.1
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NZ_CP075661.1
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NZ_OU342910.1
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NZ_OU342904.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NZ_CP069691.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_CP011143.1
See Comparison
NC_022661.1
See Comparison
NZ_CP014317.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_CP023858.1
See Comparison
NZ_CP026493.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_AP027211.1
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NZ_OX637967.1
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NZ_CP123028.1
See Comparison
NZ_CP125153.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_OY754363.1
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NZ_CP125106.1
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NZ_OY839921.1
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CP058006.1
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NZ_CP055607.1
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CP057823.1
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CP057795.1
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CP057704.1
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CP057428.1
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CP057184.1
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NZ_CP054362.1
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NZ_CP063524.1
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NZ_LR890306.1
See Comparison
NZ_LR890316.1
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NZ_LR890470.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890409.1
See Comparison
CP058045.1
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CP063735.1
See Comparison
NZ_CP060428.1
See Comparison
CP058051.1
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NZ_CP058062.1
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NZ_CP116151.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
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NZ_CP057108.1
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NZ_CP099363.1
See Comparison
CP098983.1
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CP098995.1
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CP099158.1
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CP099165.1
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NZ_CP116187.1
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OW848849.1
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NZ_OX030707.1
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NZ_CP069691.1
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OW848867.1
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NZ_CP081198.1
See Comparison
NZ_CP060961.1
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NZ_CP055035.1
See Comparison
NZ_CP080132.1
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NZ_OU342910.1
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NZ_OU342904.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP014317.1
See Comparison
NZ_CP011143.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NC_022661.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_CP023858.1
See Comparison
NZ_CP026493.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_OX637967.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_OY839921.1
See Comparison
CP058006.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP056652.1
See Comparison
NZ_CP054362.1
See Comparison
CP057795.1
See Comparison
CP057704.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_LR890470.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890409.1
See Comparison
CP063735.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_CP060428.1
See Comparison
CP058045.1
See Comparison
CP058051.1
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NZ_CP058062.1
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NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
CP098995.1
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CP099158.1
See Comparison
CP099165.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP116187.1
See Comparison
NZ_OX030707.1
See Comparison
OW848867.1
See Comparison
OW848849.1
See Comparison
NZ_CP055035.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_CP081198.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_CP080132.1
See Comparison
NZ_OU342910.1
See Comparison
NZ_OU342904.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NZ_CP069691.1
See Comparison
NZ_CP014317.1
See Comparison
NZ_CP011143.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_CP023858.1
See Comparison
NZ_CP026493.1
See Comparison
NC_022661.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_OX637967.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_LR890470.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_OY839921.1
See Comparison
CP058006.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP057795.1
See Comparison
CP057704.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_LR890409.1
See Comparison
OW848867.1
See Comparison
NZ_CP060428.1
See Comparison
CP058045.1
See Comparison
CP058051.1
See Comparison
NZ_CP058062.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP116187.1
See Comparison
NZ_OX030707.1
See Comparison
OW848849.1
See Comparison
CP063735.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
CP098995.1
See Comparison
CP099158.1
See Comparison
CP099165.1
See Comparison
NZ_OU342910.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_CP055035.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NZ_CP069691.1
See Comparison
NC_022661.1
See Comparison
NZ_CP081198.1
See Comparison
NZ_CP080132.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP014317.1
See Comparison
NZ_CP011143.1
See Comparison
NZ_OU342904.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_CP023858.1
See Comparison
NZ_CP026493.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_OX637967.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_OX030707.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_LR890470.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890409.1
See Comparison
CP063735.1
See Comparison
NZ_CP060428.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP116187.1
See Comparison
NZ_OY839921.1
See Comparison
CP058006.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP057795.1
See Comparison
CP057704.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_LR890316.1
See Comparison
CP058045.1
See Comparison
CP058051.1
See Comparison
NZ_CP058062.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
CP098995.1
See Comparison
CP099158.1
See Comparison
CP099165.1
See Comparison
NZ_CP081198.1
See Comparison
OW848849.1
See Comparison
OW848867.1
See Comparison
NZ_CP060961.1
See Comparison
NZ_CP055035.1
See Comparison
NZ_CP080132.1
See Comparison
NZ_OU342910.1
See Comparison
NZ_OU342904.1
See Comparison
NZ_CP075661.1
See Comparison
NZ_OY757131.1
See Comparison
NZ_CP047018.1
See Comparison
NZ_CP069655.1
See Comparison
NZ_CP069681.1
See Comparison
NZ_CP069675.1
See Comparison
NZ_CP069691.1
See Comparison
NZ_CP014317.1
See Comparison
NZ_CP011143.1
See Comparison
NZ_CP045286.1
See Comparison
NZ_CP023858.1
See Comparison
NC_022661.1
See Comparison
NZ_OY757118.1
See Comparison
NZ_OY754363.1
See Comparison
NZ_CP123028.1
See Comparison
NZ_CP133459.1
See Comparison
NZ_CP115349.1
See Comparison
NZ_AP027211.1
See Comparison
NZ_OX637967.1
See Comparison
NZ_CP026493.1
See Comparison
CP058006.1
See Comparison
NZ_CP125153.1
See Comparison
NZ_CP125106.1
See Comparison
NZ_OY839921.1
See Comparison
CP057704.1
See Comparison
CP057428.1
See Comparison
CP057184.1
See Comparison
CP056984.1
See Comparison
CP056652.1
See Comparison
NZ_CP055607.1
See Comparison
CP057823.1
See Comparison
CP057795.1
See Comparison
NZ_CP054362.1
See Comparison
NZ_CP063524.1
See Comparison
NZ_CP069592.1
See Comparison
NZ_LR890306.1
See Comparison
NZ_LR890316.1
See Comparison
NZ_LR890470.1
See Comparison
CP063735.1
See Comparison
NZ_LR890341.1
See Comparison
NZ_LR890409.1
See Comparison
CP058045.1
See Comparison
NZ_CP060428.1
See Comparison
CP058051.1
See Comparison
NZ_CP058062.1
See Comparison
NZ_CP057363.1
See Comparison
NZ_CP057482.1
See Comparison
NZ_CP057108.1
See Comparison
NZ_CP099363.1
See Comparison
CP098983.1
See Comparison
CP098995.1
See Comparison
CP099158.1
See Comparison
NZ_CP116151.1
See Comparison
NZ_CP116187.1
See Comparison
CP099165.1
See Comparison
NZ_OX030707.1
See Comparison
NZ_OW968115.1
See Comparison
OW848867.1
See Comparison
OW848849.1
See Comparison
NZ_CP060961.1
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Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore