Plasmid CP063735.1

Sequence

Nucleotide Information

Accession CP063735.1
Description Escherichia coli strain 18SC05VL02-EC plasmid pVPS18EC0505-7, complete sequence
Source insd
Topology circular
Length 1552 bp
GC Content 0.52 %
Created at NCBI Nov. 5, 2020



Assembly

Genome Data Information

Accession GCA_015242275.1
Assembly Coverage 685


Biosample

Curated Collection Information
Accession 16533951

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,SC
Original Query Type name
Coordinates (Lat/Lon) 33.69/-80.44
Address USA,SC

ECOSYSTEM
Original Query Veal
Classification food
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP058062.1 See Comparison
NZ_CP099363.1 See Comparison
NZ_OW968115.1 See Comparison
OW848867.1 See Comparison
NZ_CP055035.1 See Comparison
NZ_CP080132.1 See Comparison
NZ_CP075661.1 See Comparison
NZ_CP069655.1 See Comparison
NZ_CP069681.1 See Comparison
NZ_CP069675.1 See Comparison
NZ_OY754363.1 See Comparison
NZ_CP133459.1 See Comparison
NZ_OY757131.1 See Comparison
NZ_OY757118.1 See Comparison
NZ_CP115349.1 See Comparison
NZ_OY839921.1 See Comparison
CP057184.1 See Comparison
NZ_CP063524.1 See Comparison
CP057428.1 See Comparison
OW848867.1 See Comparison
NZ_OW968115.1 See Comparison
NZ_CP058062.1 See Comparison
NZ_CP099363.1 See Comparison
NZ_CP055035.1 See Comparison
NZ_CP080132.1 See Comparison
NZ_CP069655.1 See Comparison
NZ_CP075661.1 See Comparison
NZ_CP069681.1 See Comparison
NZ_CP069675.1 See Comparison
NZ_OY754363.1 See Comparison
NZ_OY757131.1 See Comparison
NZ_OY757118.1 See Comparison
NZ_CP133459.1 See Comparison
NZ_CP115349.1 See Comparison
CP063735.1 See Comparison
NZ_OY839921.1 See Comparison
CP057428.1 See Comparison
CP057184.1 See Comparison
NZ_CP063524.1 See Comparison
NZ_OW968115.1 See Comparison
NZ_CP099363.1 See Comparison
NZ_CP058062.1 See Comparison
NZ_CP063524.1 See Comparison
NZ_CP080132.1 See Comparison
NZ_CP069655.1 See Comparison
NZ_CP069681.1 See Comparison
NZ_OY754363.1 See Comparison
NZ_CP133459.1 See Comparison
NZ_CP115349.1 See Comparison
NZ_OY839921.1 See Comparison
CP057428.1 See Comparison
CP057184.1 See Comparison
OW848867.1 See Comparison
NZ_CP055035.1 See Comparison
NZ_CP075661.1 See Comparison
NZ_CP069675.1 See Comparison
NZ_OY757131.1 See Comparison
NZ_OY757118.1 See Comparison
NZ_CP099363.1 See Comparison
NZ_CP058062.1 See Comparison
CP057428.1 See Comparison
OW848867.1 See Comparison
NZ_CP069655.1 See Comparison
NZ_CP069681.1 See Comparison
NZ_CP069675.1 See Comparison
NZ_OY757131.1 See Comparison
NZ_OY757118.1 See Comparison
NZ_OY754363.1 See Comparison
NZ_CP133459.1 See Comparison
NZ_CP115349.1 See Comparison
NZ_OY839921.1 See Comparison
NZ_OW968115.1 See Comparison
NZ_CP055035.1 See Comparison
NZ_CP080132.1 See Comparison
NZ_CP075661.1 See Comparison
CP057184.1 See Comparison
OW848867.1 See Comparison
NZ_CP063524.1 See Comparison
NZ_CP058062.1 See Comparison
NZ_CP099363.1 See Comparison
NZ_OW968115.1 See Comparison
NZ_CP055035.1 See Comparison
NZ_CP069655.1 See Comparison
NZ_CP080132.1 See Comparison
NZ_CP075661.1 See Comparison
NZ_CP069681.1 See Comparison
NZ_CP069675.1 See Comparison
NZ_OY757131.1 See Comparison
NZ_OY757118.1 See Comparison
NZ_CP063524.1 See Comparison
NZ_OY839921.1 See Comparison
CP057428.1 See Comparison
CP057184.1 See Comparison
NZ_OY754363.1 See Comparison
NZ_CP133459.1 See Comparison
NZ_CP115349.1 See Comparison
NZ_CP069655.1 See Comparison
NZ_OW968115.1 See Comparison
NZ_CP080132.1 See Comparison
NZ_CP075661.1 See Comparison
NZ_CP058062.1 See Comparison
NZ_CP099363.1 See Comparison
OW848867.1 See Comparison
NZ_CP055035.1 See Comparison
NZ_CP069681.1 See Comparison
NZ_CP069675.1 See Comparison
NZ_CP063524.1 See Comparison
NZ_OY757131.1 See Comparison
NZ_OY757118.1 See Comparison
NZ_OY754363.1 See Comparison
NZ_CP133459.1 See Comparison
NZ_CP115349.1 See Comparison
NZ_OY839921.1 See Comparison
CP057428.1 See Comparison
CP057184.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore