Plasmid NZ_CP121134.1

Sequence

Nucleotide Information

Accession NZ_CP121134.1
Description Klebsiella pneumoniae strain UHD-45_PH plasmid pESBL-PH-45, complete sequence
Source refseq
Topology circular
Length 247179 bp
GC Content 0.53 %
Created at NCBI April 10, 2023



Assembly

Genome Data Information

Accession GCF_029625055.1
Assembly Coverage 1682


Biosample

Curated Collection Information
Accession 33954880

PLASMID INFORMATION
Genotype ST628

GEOGRAPHICAL INFORMATION
Original Query 50.7214N;1.9738W
Original Query Type coordinates
Coordinates (Lat/Lon) 50.72/-1.97
Address Poole General Hospital, Longfleet Road, Longfleet, Poole, Bournemouth, Christchurch and Poole, England, BH15 2JB, United Kingdom

ECOSYSTEM
Original Query Homo sapiens,Rectal swab
Classification gastrointestinal_system,host_associated,rectal
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query Colonised
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

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NZ_LR890344.1 See Comparison
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NZ_CP065164.1 See Comparison
LR890401.1 See Comparison
NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
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NZ_CP121136.1 See Comparison
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NZ_CP082043.1 See Comparison
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CP024483.1 See Comparison
NZ_CP089384.1 See Comparison
NZ_CP073628.1 See Comparison
NZ_CP131947.1 See Comparison
NZ_CP133742.1 See Comparison
NZ_CP065164.1 See Comparison
NZ_CP110144.1 See Comparison
NZ_CP141555.1 See Comparison
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NZ_CP131947.1 See Comparison
NZ_CP110144.1 See Comparison
NZ_CP129791.1 See Comparison
NZ_CP129800.1 See Comparison
NZ_CP141566.1 See Comparison
CP155720.1 See Comparison
NZ_CP151001.1 See Comparison
NZ_CP141580.1 See Comparison
CP052586.1 See Comparison
NZ_CP141555.1 See Comparison
CP052499.1 See Comparison
CP052441.1 See Comparison
NZ_LR890680.1 See Comparison
CP052243.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_CP065164.1 See Comparison
LR890401.1 See Comparison
NZ_OP378652.1 See Comparison
NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
NZ_CP121138.1 See Comparison
NZ_CP121136.1 See Comparison
NZ_CP121128.1 See Comparison
NZ_CP121144.1 See Comparison
NZ_CP121142.1 See Comparison
NZ_CP121130.1 See Comparison
NZ_CP089885.1 See Comparison
CP119185.1 See Comparison
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OX030710.1 See Comparison
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CP137924.1 See Comparison
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NZ_CP151001.1 See Comparison
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CP119185.1 See Comparison
NZ_CP065164.1 See Comparison
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NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
NZ_CP121138.1 See Comparison
NZ_CP121136.1 See Comparison
NZ_CP121128.1 See Comparison
NZ_CP121144.1 See Comparison
NZ_CP121142.1 See Comparison
NZ_CP121130.1 See Comparison
CP110610.1 See Comparison
NZ_CP114854.1 See Comparison
CP110586.1 See Comparison
NZ_CP067371.1 See Comparison
NZ_OW967375.1 See Comparison
NZ_CP103730.1 See Comparison
OX030699.1 See Comparison
OX030720.1 See Comparison
OX030710.1 See Comparison
OW967030.1 See Comparison
OW968217.1 See Comparison
OW968148.1 See Comparison
OW968121.1 See Comparison
OW969841.1 See Comparison
OW968366.1 See Comparison
OW848909.1 See Comparison
OW848970.1 See Comparison
OW848947.1 See Comparison
OW849406.1 See Comparison
OW848863.1 See Comparison
OW849326.1 See Comparison
CP067661.1 See Comparison
OW849024.1 See Comparison
OW849017.1 See Comparison
NZ_CP086456.1 See Comparison
NZ_CP086459.1 See Comparison
NZ_CP086462.1 See Comparison
NZ_CP086465.1 See Comparison
NZ_CP086468.1 See Comparison
CP067952.1 See Comparison
CP067949.1 See Comparison
CP094886.1 See Comparison
CP094884.1 See Comparison
CP024500.1 See Comparison
NZ_CP089384.1 See Comparison
NZ_CP082043.1 See Comparison
NZ_CP073628.1 See Comparison
NZ_CP090394.1 See Comparison
NZ_CP090390.1 See Comparison
CP024483.1 See Comparison
NZ_CP133742.1 See Comparison
CP137924.1 See Comparison
NZ_CP131947.1 See Comparison
NZ_CP121134.1 See Comparison
NZ_CP129791.1 See Comparison
NZ_CP129800.1 See Comparison
NZ_CP110144.1 See Comparison
CP155720.1 See Comparison
CP052441.1 See Comparison
CP052243.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_CP065164.1 See Comparison
LR890401.1 See Comparison
NZ_CP089885.1 See Comparison
NZ_CP151001.1 See Comparison
NZ_CP141555.1 See Comparison
NZ_CP141566.1 See Comparison
NZ_CP141580.1 See Comparison
CP052586.1 See Comparison
CP052499.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
NZ_CP121138.1 See Comparison
NZ_CP121136.1 See Comparison
NZ_CP121128.1 See Comparison
NZ_CP121144.1 See Comparison
NZ_CP121142.1 See Comparison
NZ_CP121130.1 See Comparison
NZ_OP378652.1 See Comparison
CP119185.1 See Comparison
NZ_CP103730.1 See Comparison
CP110586.1 See Comparison
NZ_CP114854.1 See Comparison
CP110610.1 See Comparison
NZ_CP067371.1 See Comparison
OX030720.1 See Comparison
OX030710.1 See Comparison
NZ_OW967375.1 See Comparison
OX030699.1 See Comparison
OW969841.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore