Plasmid LR890401.1

Sequence

Nucleotide Information

Accession LR890401.1
Description Klebsiella pneumoniae isolate INF345-sc-2280164 genome assembly, plasmid: 3
Source insd
Topology circular
Length 243534 bp
GC Content 0.52 %
Created at NCBI Oct. 30, 2020



Biosample

Curated Collection Information
Accession 4042708

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Australia
Original Query Type name
Coordinates (Lat/Lon) -24.78/134.76
Address Australia

ECOSYSTEM
Original Query Homo sapiens,wound swab
Classification host_associated,wound
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP052586.1 See Comparison
CP052243.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890370.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_CP065168.1 See Comparison
NZ_CP065164.1 See Comparison
NZ_CP121134.1 See Comparison
NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
NZ_CP121138.1 See Comparison
NZ_CP121136.1 See Comparison
NZ_CP121128.1 See Comparison
NZ_CP121144.1 See Comparison
NZ_CP121142.1 See Comparison
NZ_CP121130.1 See Comparison
NZ_CP089885.1 See Comparison
NZ_OP378652.1 See Comparison
CP110610.1 See Comparison
CP110586.1 See Comparison
NZ_CP103730.1 See Comparison
OX030699.1 See Comparison
OX030720.1 See Comparison
OW968217.1 See Comparison
NZ_OW967375.1 See Comparison
NZ_CP067371.1 See Comparison
OW968121.1 See Comparison
OW967030.1 See Comparison
OW848970.1 See Comparison
OW848863.1 See Comparison
CP094886.1 See Comparison
OW849326.1 See Comparison
NZ_CP086456.1 See Comparison
CP094884.1 See Comparison
NZ_CP090394.1 See Comparison
NZ_CP086459.1 See Comparison
NZ_CP086462.1 See Comparison
NZ_CP086465.1 See Comparison
NZ_CP086468.1 See Comparison
CP067949.1 See Comparison
CP067661.1 See Comparison
NZ_CP073628.1 See Comparison
NZ_CP089384.1 See Comparison
CP024500.1 See Comparison
CP024483.1 See Comparison
CP137924.1 See Comparison
NZ_CP131947.1 See Comparison
NZ_CP133742.1 See Comparison
NZ_CP121134.1 See Comparison
NZ_CP110144.1 See Comparison
NZ_CP151001.1 See Comparison
CP052586.1 See Comparison
CP155720.1 See Comparison
NZ_CP141555.1 See Comparison
NZ_CP141566.1 See Comparison
NZ_CP141580.1 See Comparison
CP052243.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890370.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_CP065168.1 See Comparison
NZ_CP065164.1 See Comparison
NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
NZ_CP089885.1 See Comparison
NZ_CP121138.1 See Comparison
NZ_CP121136.1 See Comparison
NZ_CP121128.1 See Comparison
NZ_CP121144.1 See Comparison
NZ_CP121142.1 See Comparison
NZ_CP121130.1 See Comparison
NZ_OP378652.1 See Comparison
NZ_OW967375.1 See Comparison
CP110610.1 See Comparison
CP110586.1 See Comparison
NZ_CP103730.1 See Comparison
OX030699.1 See Comparison
OX030720.1 See Comparison
NZ_CP067371.1 See Comparison
CP024500.1 See Comparison
OW968217.1 See Comparison
OW968121.1 See Comparison
OW967030.1 See Comparison
OW848970.1 See Comparison
OW848863.1 See Comparison
NZ_CP086456.1 See Comparison
NZ_CP086459.1 See Comparison
NZ_CP086462.1 See Comparison
NZ_CP086465.1 See Comparison
NZ_CP086468.1 See Comparison
NZ_CP090394.1 See Comparison
NZ_CP073628.1 See Comparison
OW849326.1 See Comparison
CP094886.1 See Comparison
CP094884.1 See Comparison
CP067949.1 See Comparison
CP067661.1 See Comparison
NZ_CP089384.1 See Comparison
CP024483.1 See Comparison
NZ_CP133742.1 See Comparison
CP137924.1 See Comparison
NZ_CP151001.1 See Comparison
NZ_CP131947.1 See Comparison
NZ_CP110144.1 See Comparison
CP155720.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_CP141555.1 See Comparison
NZ_CP141566.1 See Comparison
NZ_CP141580.1 See Comparison
CP052586.1 See Comparison
CP052243.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890370.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_CP065168.1 See Comparison
NZ_CP065164.1 See Comparison
LR890401.1 See Comparison
CP024500.1 See Comparison
NZ_CP121134.1 See Comparison
NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
NZ_CP121138.1 See Comparison
NZ_CP121136.1 See Comparison
NZ_CP121128.1 See Comparison
NZ_CP121144.1 See Comparison
NZ_CP121142.1 See Comparison
NZ_CP121130.1 See Comparison
NZ_CP089885.1 See Comparison
NZ_OP378652.1 See Comparison
OW968217.1 See Comparison
OW968121.1 See Comparison
OW967030.1 See Comparison
OW848970.1 See Comparison
OW848863.1 See Comparison
NZ_CP086456.1 See Comparison
NZ_CP086459.1 See Comparison
NZ_CP086462.1 See Comparison
CP067949.1 See Comparison
NZ_CP089384.1 See Comparison
CP110610.1 See Comparison
CP110586.1 See Comparison
NZ_CP103730.1 See Comparison
OX030699.1 See Comparison
OX030720.1 See Comparison
NZ_OW967375.1 See Comparison
NZ_CP067371.1 See Comparison
OW849326.1 See Comparison
CP094886.1 See Comparison
CP094884.1 See Comparison
NZ_CP086465.1 See Comparison
NZ_CP086468.1 See Comparison
CP067661.1 See Comparison
NZ_CP090394.1 See Comparison
NZ_CP073628.1 See Comparison
CP024483.1 See Comparison
NZ_LR890375.1 See Comparison
CP137924.1 See Comparison
NZ_CP133742.1 See Comparison
NZ_CP131947.1 See Comparison
NZ_CP110144.1 See Comparison
CP155720.1 See Comparison
NZ_CP151001.1 See Comparison
NZ_CP141555.1 See Comparison
NZ_CP141566.1 See Comparison
NZ_CP141580.1 See Comparison
CP052586.1 See Comparison
CP052243.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890370.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_CP065168.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_CP065164.1 See Comparison
NZ_OP378652.1 See Comparison
NZ_CP121134.1 See Comparison
NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
NZ_CP121138.1 See Comparison
NZ_CP121136.1 See Comparison
NZ_CP121128.1 See Comparison
NZ_CP121144.1 See Comparison
NZ_CP121142.1 See Comparison
NZ_CP121130.1 See Comparison
CP110610.1 See Comparison
NZ_CP089885.1 See Comparison
CP110586.1 See Comparison
OW967030.1 See Comparison
OW968121.1 See Comparison
NZ_CP103730.1 See Comparison
OX030699.1 See Comparison
OX030720.1 See Comparison
NZ_OW967375.1 See Comparison
NZ_CP067371.1 See Comparison
OW848970.1 See Comparison
OW848863.1 See Comparison
OW849326.1 See Comparison
CP094886.1 See Comparison
OW968217.1 See Comparison
CP094884.1 See Comparison
CP067949.1 See Comparison
NZ_CP086465.1 See Comparison
NZ_CP086468.1 See Comparison
NZ_CP086456.1 See Comparison
NZ_CP086459.1 See Comparison
NZ_CP086462.1 See Comparison
NZ_CP073628.1 See Comparison
NZ_CP090394.1 See Comparison
CP067661.1 See Comparison
NZ_CP089384.1 See Comparison
CP024500.1 See Comparison
CP024483.1 See Comparison
CP155720.1 See Comparison
CP137924.1 See Comparison
NZ_CP133742.1 See Comparison
NZ_CP110144.1 See Comparison
NZ_CP131947.1 See Comparison
NZ_CP151001.1 See Comparison
NZ_LR890416.1 See Comparison
CP052586.1 See Comparison
CP052243.1 See Comparison
NZ_CP141555.1 See Comparison
NZ_CP141566.1 See Comparison
NZ_CP141580.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890370.1 See Comparison
NZ_LR890385.1 See Comparison
CP110610.1 See Comparison
NZ_CP065168.1 See Comparison
NZ_CP065164.1 See Comparison
NZ_OP378652.1 See Comparison
NZ_CP121134.1 See Comparison
NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
NZ_CP121138.1 See Comparison
NZ_CP121136.1 See Comparison
NZ_CP121128.1 See Comparison
NZ_CP121144.1 See Comparison
NZ_CP121142.1 See Comparison
NZ_CP121130.1 See Comparison
NZ_CP089885.1 See Comparison
CP110586.1 See Comparison
NZ_CP103730.1 See Comparison
OX030699.1 See Comparison
OX030720.1 See Comparison
OW968217.1 See Comparison
NZ_OW967375.1 See Comparison
NZ_CP067371.1 See Comparison
OW968121.1 See Comparison
CP067949.1 See Comparison
OW967030.1 See Comparison
OW848970.1 See Comparison
OW848863.1 See Comparison
OW849326.1 See Comparison
CP094886.1 See Comparison
CP094884.1 See Comparison
NZ_CP086456.1 See Comparison
NZ_CP086459.1 See Comparison
NZ_CP086462.1 See Comparison
NZ_CP086465.1 See Comparison
NZ_CP086468.1 See Comparison
NZ_CP073628.1 See Comparison
NZ_CP090394.1 See Comparison
CP067661.1 See Comparison
NZ_CP089384.1 See Comparison
NZ_CP131947.1 See Comparison
CP024500.1 See Comparison
CP024483.1 See Comparison
CP137924.1 See Comparison
NZ_CP133742.1 See Comparison
CP155720.1 See Comparison
NZ_CP110144.1 See Comparison
NZ_CP141555.1 See Comparison
NZ_CP151001.1 See Comparison
NZ_CP141566.1 See Comparison
NZ_CP141580.1 See Comparison
CP052243.1 See Comparison
NZ_LR890344.1 See Comparison
CP052586.1 See Comparison
NZ_LR890370.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_CP065168.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_CP065164.1 See Comparison
NZ_OP378652.1 See Comparison
NZ_CP121134.1 See Comparison
NZ_CP121132.1 See Comparison
NZ_CP121146.1 See Comparison
NZ_CP121138.1 See Comparison
NZ_CP121136.1 See Comparison
NZ_CP121128.1 See Comparison
NZ_CP121144.1 See Comparison
NZ_CP121142.1 See Comparison
NZ_CP121130.1 See Comparison
NZ_CP089885.1 See Comparison
NZ_OW967375.1 See Comparison
CP110610.1 See Comparison
CP110586.1 See Comparison
OX030699.1 See Comparison
NZ_CP103730.1 See Comparison
OX030720.1 See Comparison
NZ_CP067371.1 See Comparison
OW968217.1 See Comparison
OW968121.1 See Comparison
OW849326.1 See Comparison
OW967030.1 See Comparison
OW848863.1 See Comparison
OW848970.1 See Comparison
NZ_CP073628.1 See Comparison
CP094886.1 See Comparison
CP094884.1 See Comparison
NZ_CP086456.1 See Comparison
NZ_CP086459.1 See Comparison
NZ_CP086462.1 See Comparison
NZ_CP086465.1 See Comparison
NZ_CP086468.1 See Comparison
CP067949.1 See Comparison
CP067661.1 See Comparison
NZ_CP090394.1 See Comparison
NZ_CP089384.1 See Comparison
NZ_CP133742.1 See Comparison
CP137924.1 See Comparison
CP024500.1 See Comparison
CP024483.1 See Comparison
NZ_CP131947.1 See Comparison
NZ_CP110144.1 See Comparison
NZ_CP151001.1 See Comparison
CP155720.1 See Comparison
NZ_CP141555.1 See Comparison
NZ_CP141566.1 See Comparison
NZ_CP141580.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore