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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP086456.1
Sequence
Nucleotide Information
Accession
NZ_CP086456.1
Description
Klebsiella pneumoniae strain MCL-2017-2-T20-ESBL plasmid pMCL-2017-T20-ESBL_1, complete sequence
Source
refseq
Topology
circular
Length
246787 bp
GC Content
0.53 %
Created at NCBI
March 31, 2022
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Assembly
Genome Data Information
Accession
GCF_022759685.1
Assembly Coverage
420
Biosample
Curated Collection Information
Accession
22108730
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
Switzerland
Original Query Type
name
Coordinates (Lat/Lon)
46.80/8.23
Address
Switzerland
ECOSYSTEM
Original Query
Homo sapiens
Classification
host_associated
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
NZ_CP086457.1
Similar Plasmids
based on Mash distance
NZ_LR890416.1
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NZ_LR890485.1
See Comparison
NZ_LR890680.1
See Comparison
NZ_LR890191.1
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NZ_LR890205.1
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NZ_LR890392.1
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NZ_LR890231.1
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NZ_LR890375.1
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NZ_LR890344.1
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NZ_LR890385.1
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NZ_CP065164.1
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LR890401.1
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NZ_CP121134.1
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NZ_CP121132.1
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NZ_CP121146.1
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NZ_CP121138.1
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NZ_CP121136.1
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NZ_CP121128.1
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NZ_CP121144.1
See Comparison
NZ_CP121142.1
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NZ_CP121130.1
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NZ_CP089885.1
See Comparison
NZ_OP378652.1
See Comparison
NZ_CP114854.1
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CP110610.1
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CP110586.1
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NZ_CP103730.1
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OX030699.1
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OX030720.1
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OX030710.1
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NZ_OW967375.1
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NZ_CP067371.1
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OW969841.1
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OW968366.1
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OW968217.1
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OW968121.1
See Comparison
OW967030.1
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OW848970.1
See Comparison
OW848863.1
See Comparison
OW849406.1
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OW849326.1
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CP094886.1
See Comparison
CP094884.1
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NZ_CP086456.1
See Comparison
NZ_CP086459.1
See Comparison
NZ_CP086462.1
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NZ_CP086465.1
See Comparison
NZ_CP086468.1
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CP067949.1
See Comparison
CP067661.1
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NZ_CP090394.1
See Comparison
NZ_CP090390.1
See Comparison
NZ_CP089384.1
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CP024500.1
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NZ_CP082043.1
See Comparison
NZ_CP073628.1
See Comparison
CP024483.1
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CP155720.1
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CP137924.1
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NZ_CP110144.1
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NZ_CP133742.1
See Comparison
NZ_CP131947.1
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NZ_CP129791.1
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NZ_CP129800.1
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CP052499.1
See Comparison
NZ_CP141555.1
See Comparison
NZ_CP141566.1
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NZ_CP141580.1
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NZ_CP151001.1
See Comparison
CP052441.1
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CP052243.1
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NZ_LR890416.1
See Comparison
CP052586.1
See Comparison
NZ_LR890485.1
See Comparison
NZ_LR890680.1
See Comparison
NZ_LR890191.1
See Comparison
NZ_LR890385.1
See Comparison
NZ_LR890205.1
See Comparison
NZ_LR890392.1
See Comparison
NZ_LR890231.1
See Comparison
NZ_LR890375.1
See Comparison
NZ_LR890344.1
See Comparison
LR890401.1
See Comparison
NZ_CP065164.1
See Comparison
CP110610.1
See Comparison
NZ_CP121134.1
See Comparison
NZ_CP121132.1
See Comparison
NZ_CP121146.1
See Comparison
NZ_CP121138.1
See Comparison
NZ_CP121136.1
See Comparison
NZ_CP121128.1
See Comparison
NZ_CP121144.1
See Comparison
NZ_CP121142.1
See Comparison
NZ_CP121130.1
See Comparison
NZ_CP089885.1
See Comparison
NZ_OP378652.1
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NZ_CP114854.1
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CP110586.1
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OX030720.1
See Comparison
NZ_CP103730.1
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OX030710.1
See Comparison
OX030699.1
See Comparison
OW969841.1
See Comparison
NZ_CP067371.1
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NZ_OW967375.1
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OW967030.1
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OW968217.1
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OW968121.1
See Comparison
OW848970.1
See Comparison
OW968366.1
See Comparison
OW849406.1
See Comparison
OW848863.1
See Comparison
OW849326.1
See Comparison
CP067661.1
See Comparison
NZ_CP086459.1
See Comparison
NZ_CP086462.1
See Comparison
CP094886.1
See Comparison
CP094884.1
See Comparison
NZ_CP086465.1
See Comparison
NZ_CP086468.1
See Comparison
CP067949.1
See Comparison
NZ_CP073628.1
See Comparison
NZ_CP090394.1
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NZ_CP090390.1
See Comparison
NZ_CP089384.1
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CP137924.1
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NZ_CP082043.1
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CP024500.1
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CP024483.1
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CP155720.1
See Comparison
NZ_CP133742.1
See Comparison
NZ_CP131947.1
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NZ_CP129791.1
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NZ_CP129800.1
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NZ_CP110144.1
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NZ_CP151001.1
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CP052586.1
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NZ_CP141555.1
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NZ_CP141566.1
See Comparison
NZ_CP141580.1
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CP052499.1
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CP052441.1
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CP052243.1
See Comparison
NZ_LR890385.1
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NZ_LR890485.1
See Comparison
NZ_LR890680.1
See Comparison
NZ_LR890191.1
See Comparison
NZ_CP065164.1
See Comparison
NZ_LR890205.1
See Comparison
NZ_LR890392.1
See Comparison
NZ_LR890231.1
See Comparison
NZ_LR890375.1
See Comparison
NZ_LR890344.1
See Comparison
NZ_LR890416.1
See Comparison
NZ_OP378652.1
See Comparison
LR890401.1
See Comparison
NZ_CP121134.1
See Comparison
NZ_CP121132.1
See Comparison
NZ_CP121146.1
See Comparison
NZ_CP121138.1
See Comparison
NZ_CP121136.1
See Comparison
NZ_CP121128.1
See Comparison
NZ_CP121144.1
See Comparison
NZ_CP121142.1
See Comparison
NZ_CP121130.1
See Comparison
NZ_CP089885.1
See Comparison
CP110610.1
See Comparison
NZ_CP114854.1
See Comparison
CP110586.1
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OX030699.1
See Comparison
NZ_CP103730.1
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OX030720.1
See Comparison
OX030710.1
See Comparison
OW968217.1
See Comparison
NZ_CP067371.1
See Comparison
NZ_OW967375.1
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OW969841.1
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OW968366.1
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OW968121.1
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OW848970.1
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OW848863.1
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OW967030.1
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NZ_CP086468.1
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OW849406.1
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CP094886.1
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CP094884.1
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OW849326.1
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NZ_CP086459.1
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CP067661.1
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NZ_CP086462.1
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NZ_CP086465.1
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CP067949.1
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NZ_CP090394.1
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NZ_CP090390.1
See Comparison
NZ_CP082043.1
See Comparison
NZ_CP089384.1
See Comparison
NZ_CP131947.1
See Comparison
CP024500.1
See Comparison
CP024483.1
See Comparison
NZ_CP073628.1
See Comparison
CP137924.1
See Comparison
NZ_CP133742.1
See Comparison
NZ_CP141555.1
See Comparison
NZ_CP110144.1
See Comparison
NZ_CP129791.1
See Comparison
NZ_CP129800.1
See Comparison
CP155720.1
See Comparison
NZ_CP151001.1
See Comparison
NZ_LR890680.1
See Comparison
NZ_CP141566.1
See Comparison
NZ_CP141580.1
See Comparison
CP052586.1
See Comparison
CP052499.1
See Comparison
CP052441.1
See Comparison
CP052243.1
See Comparison
NZ_LR890191.1
See Comparison
NZ_LR890205.1
See Comparison
NZ_LR890416.1
See Comparison
NZ_LR890392.1
See Comparison
NZ_LR890485.1
See Comparison
NZ_LR890231.1
See Comparison
NZ_LR890375.1
See Comparison
NZ_LR890344.1
See Comparison
NZ_LR890385.1
See Comparison
NZ_OP378652.1
See Comparison
NZ_CP065164.1
See Comparison
LR890401.1
See Comparison
NZ_CP121132.1
See Comparison
NZ_CP121146.1
See Comparison
NZ_CP121138.1
See Comparison
NZ_CP121136.1
See Comparison
NZ_CP121128.1
See Comparison
NZ_CP121144.1
See Comparison
NZ_CP121142.1
See Comparison
NZ_CP121130.1
See Comparison
NZ_CP089885.1
See Comparison
NZ_CP103730.1
See Comparison
CP110610.1
See Comparison
CP110586.1
See Comparison
NZ_CP121134.1
See Comparison
NZ_CP114854.1
See Comparison
OX030710.1
See Comparison
NZ_CP067371.1
See Comparison
NZ_OW967375.1
See Comparison
OX030699.1
See Comparison
OX030720.1
See Comparison
OW967030.1
See Comparison
OW968217.1
See Comparison
OW968121.1
See Comparison
OW969841.1
See Comparison
OW968366.1
See Comparison
OW848970.1
See Comparison
OW849406.1
See Comparison
OW848863.1
See Comparison
CP094886.1
See Comparison
OW849326.1
See Comparison
CP094884.1
See Comparison
NZ_CP090394.1
See Comparison
NZ_CP086459.1
See Comparison
NZ_CP086462.1
See Comparison
NZ_CP086465.1
See Comparison
NZ_CP086468.1
See Comparison
CP067949.1
See Comparison
CP067661.1
See Comparison
NZ_CP090390.1
See Comparison
NZ_CP082043.1
See Comparison
NZ_CP089384.1
See Comparison
CP137924.1
See Comparison
CP024500.1
See Comparison
CP024483.1
See Comparison
NZ_CP073628.1
See Comparison
NZ_CP129791.1
See Comparison
NZ_CP133742.1
See Comparison
NZ_CP131947.1
See Comparison
NZ_CP129800.1
See Comparison
CP155720.1
See Comparison
NZ_CP110144.1
See Comparison
NZ_CP151001.1
See Comparison
NZ_CP141566.1
See Comparison
NZ_CP141580.1
See Comparison
NZ_LR890680.1
See Comparison
NZ_CP141555.1
See Comparison
CP052586.1
See Comparison
CP052499.1
See Comparison
CP052441.1
See Comparison
CP052243.1
See Comparison
NZ_LR890191.1
See Comparison
NZ_LR890205.1
See Comparison
NZ_LR890392.1
See Comparison
NZ_LR890231.1
See Comparison
NZ_LR890416.1
See Comparison
NZ_LR890375.1
See Comparison
NZ_LR890485.1
See Comparison
NZ_LR890344.1
See Comparison
NZ_LR890385.1
See Comparison
NZ_CP121134.1
See Comparison
LR890401.1
See Comparison
NZ_CP121128.1
See Comparison
NZ_CP121144.1
See Comparison
NZ_CP121142.1
See Comparison
NZ_CP121130.1
See Comparison
NZ_CP089885.1
See Comparison
NZ_CP065164.1
See Comparison
NZ_CP121132.1
See Comparison
NZ_CP121146.1
See Comparison
NZ_CP121138.1
See Comparison
NZ_CP121136.1
See Comparison
CP110610.1
See Comparison
NZ_OP378652.1
See Comparison
NZ_CP114854.1
See Comparison
CP110586.1
See Comparison
OX030699.1
See Comparison
NZ_CP103730.1
See Comparison
OX030720.1
See Comparison
OX030710.1
See Comparison
OW968217.1
See Comparison
NZ_CP067371.1
See Comparison
NZ_OW967375.1
See Comparison
OW969841.1
See Comparison
OW968366.1
See Comparison
OW968121.1
See Comparison
OW848863.1
See Comparison
OW849406.1
See Comparison
OW967030.1
See Comparison
OW848970.1
See Comparison
OW849326.1
See Comparison
CP094886.1
See Comparison
CP094884.1
See Comparison
CP067949.1
See Comparison
NZ_CP086459.1
See Comparison
NZ_CP086462.1
See Comparison
NZ_CP086465.1
See Comparison
NZ_CP086468.1
See Comparison
CP067661.1
See Comparison
NZ_CP090394.1
See Comparison
NZ_CP090390.1
See Comparison
NZ_CP073628.1
See Comparison
NZ_CP089384.1
See Comparison
NZ_CP129791.1
See Comparison
NZ_CP082043.1
See Comparison
CP137924.1
See Comparison
NZ_CP133742.1
See Comparison
CP024500.1
See Comparison
CP024483.1
See Comparison
NZ_CP131947.1
See Comparison
NZ_CP129800.1
See Comparison
NZ_CP151001.1
See Comparison
CP155720.1
See Comparison
NZ_CP110144.1
See Comparison
NZ_CP141555.1
See Comparison
NZ_CP141566.1
See Comparison
NZ_CP141580.1
See Comparison
CP052441.1
See Comparison
CP052586.1
See Comparison
CP052243.1
See Comparison
CP052499.1
See Comparison
NZ_LR890416.1
See Comparison
NZ_LR890680.1
See Comparison
NZ_LR890191.1
See Comparison
NZ_LR890485.1
See Comparison
NZ_LR890205.1
See Comparison
NZ_CP089885.1
See Comparison
NZ_LR890392.1
See Comparison
NZ_LR890231.1
See Comparison
NZ_LR890375.1
See Comparison
NZ_LR890344.1
See Comparison
NZ_LR890385.1
See Comparison
NZ_CP065164.1
See Comparison
LR890401.1
See Comparison
CP110586.1
See Comparison
NZ_CP121134.1
See Comparison
NZ_CP121132.1
See Comparison
NZ_CP121146.1
See Comparison
NZ_CP121138.1
See Comparison
NZ_CP121136.1
See Comparison
NZ_CP121128.1
See Comparison
NZ_CP121144.1
See Comparison
NZ_CP121142.1
See Comparison
NZ_CP121130.1
See Comparison
NZ_CP114854.1
See Comparison
NZ_OP378652.1
See Comparison
OX030699.1
See Comparison
CP110610.1
See Comparison
NZ_CP103730.1
See Comparison
OX030720.1
See Comparison
OX030710.1
See Comparison
OW968217.1
See Comparison
NZ_CP067371.1
See Comparison
NZ_OW967375.1
See Comparison
OW969841.1
See Comparison
OW968366.1
See Comparison
OW968121.1
See Comparison
OW848863.1
See Comparison
OW967030.1
See Comparison
OW848970.1
See Comparison
OW849326.1
See Comparison
OW849406.1
See Comparison
NZ_CP086459.1
See Comparison
CP094886.1
See Comparison
CP094884.1
See Comparison
NZ_CP086462.1
See Comparison
NZ_CP086465.1
See Comparison
NZ_CP086468.1
See Comparison
NZ_CP089384.1
See Comparison
CP067949.1
See Comparison
NZ_CP090394.1
See Comparison
NZ_CP090390.1
See Comparison
CP067661.1
See Comparison
NZ_CP073628.1
See Comparison
NZ_CP110144.1
See Comparison
CP024500.1
See Comparison
CP024483.1
See Comparison
NZ_CP133742.1
See Comparison
NZ_CP131947.1
See Comparison
NZ_CP082043.1
See Comparison
CP137924.1
See Comparison
NZ_CP129791.1
See Comparison
NZ_CP129800.1
See Comparison
CP052586.1
See Comparison
CP155720.1
See Comparison
NZ_CP151001.1
See Comparison
NZ_CP141555.1
See Comparison
NZ_CP141566.1
See Comparison
NZ_CP141580.1
See Comparison
CP052441.1
See Comparison
CP052499.1
See Comparison
CP052243.1
See Comparison
Identical Plasmids
100% Sequence Identity
NZ_CP086462.1
Sequence
Accession
:
NZ_CP086462.1
Description
: Klebsiella pneumoniae strain MCL-2017-2-T5-ESBL plasmid pMCL-2017-T5-ESBL_1, complete sequence
Source
: refseq
Created at NCBI
: March 31, 2022
Host Taxonomy
Assigned Host
:
Klebsiella pneumoniae (573)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Klebsiella (570)
Species
:
Klebsiella_pneumoniae (573)
Strain
:
Biosample
Accession
:
22108728
GEOGRAPHICAL INFORMATION
Original Query
: Switzerland
Original Query Type
: name
Address
: Switzerland
Coordinates
(Lat/Lon): 46.80/8.23
ECOSYSTEM
Original Query
: Homo sapiens
Classification
: host_associated
Host-associated Taxon
:
Homo sapiens (
9606
)
Visualization
PNG
JSON
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore