Plasmid NZ_CP095610.1

Sequence

Nucleotide Information

Accession NZ_CP095610.1
Description Klebsiella pneumoniae strain dm338b plasmid p_dm338b_NDM5, complete sequence
Source refseq
Topology circular
Length 95487 bp
GC Content 0.53 %
Created at NCBI April 21, 2022



Biosample

Curated Collection Information
Accession 18613519

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Bangladesh,Dhaka
Original Query Type name
Coordinates (Lat/Lon) 23.76/90.38
Address Bangladesh,Dhaka

ECOSYSTEM
Original Query Homo sapiens,Pure culture one microbial species,Wound swab
Classification cell_culture,host_associated,wound
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_CP095681.1 See Comparison
NZ_CP095683.1 See Comparison
NZ_CP127509.1 See Comparison
NZ_CP127512.1 See Comparison
NZ_KY130431.1 See Comparison
CP058801.1 See Comparison
NZ_CP053768.1 See Comparison
NZ_AP023236.1 See Comparison
NZ_LC506720.1 See Comparison
NZ_LC506718.1 See Comparison
NZ_LC506717.1 See Comparison
NZ_KT725789.1 See Comparison
NZ_KT725788.1 See Comparison
NZ_AP018144.1 See Comparison
NZ_CP050367.1 See Comparison
NZ_AP023454.1 See Comparison
NZ_CP054171.1 See Comparison
LC744515.1 See Comparison
LC744512.1 See Comparison
LC744498.1 See Comparison
LC744497.1 See Comparison
LC744491.1 See Comparison
LC744488.1 See Comparison
LC744487.1 See Comparison
LC744480.1 See Comparison
LC744475.1 See Comparison
LC744473.1 See Comparison
LC744470.1 See Comparison
LC744467.1 See Comparison
LC744465.1 See Comparison
LC744449.1 See Comparison
LC744443.1 See Comparison
LC744440.1 See Comparison
NZ_LC506720.1 See Comparison
NZ_CP024836.1 See Comparison
NZ_CP024840.1 See Comparison
NZ_CP095681.1 See Comparison
NZ_KY130431.1 See Comparison
NZ_AP023434.1 See Comparison
NZ_CP095669.1 See Comparison
NZ_CP095655.1 See Comparison
NZ_CP095650.1 See Comparison
NZ_CP095670.1 See Comparison
NZ_CP095626.1 See Comparison
NZ_CP095621.1 See Comparison
NZ_CP095632.1 See Comparison
NZ_CP095606.1 See Comparison
NZ_CP095576.1 See Comparison
NZ_CP095622.1 See Comparison
NZ_CP095601.1 See Comparison
NZ_CP095611.1 See Comparison
NZ_CP095618.1 See Comparison
NZ_CP095663.1 See Comparison
NZ_CP095648.1 See Comparison
NZ_CP095595.1 See Comparison
NZ_CP095574.1 See Comparison
NZ_CP095619.1 See Comparison
NZ_CP095624.1 See Comparison
NZ_MZ892875.1 See Comparison
NZ_AP023220.2 See Comparison
NZ_CP023895.1 See Comparison
NZ_CP095683.1 See Comparison
NZ_CP127509.1 See Comparison
NZ_CP127512.1 See Comparison
CP058801.1 See Comparison
NZ_CP053768.1 See Comparison
NZ_AP023236.1 See Comparison
NZ_LC506718.1 See Comparison
NZ_LC506717.1 See Comparison
NZ_KT725789.1 See Comparison
NZ_KT725788.1 See Comparison
NZ_CP050367.1 See Comparison
NZ_CP054171.1 See Comparison
NZ_AP023454.1 See Comparison
NZ_AP018144.1 See Comparison
NZ_CP095681.1 See Comparison
LC744515.1 See Comparison
LC744512.1 See Comparison
LC744498.1 See Comparison
LC744497.1 See Comparison
LC744491.1 See Comparison
LC744488.1 See Comparison
LC744487.1 See Comparison
LC744480.1 See Comparison
LC744475.1 See Comparison
LC744473.1 See Comparison
LC744470.1 See Comparison
LC744467.1 See Comparison
LC744465.1 See Comparison
LC744449.1 See Comparison
LC744443.1 See Comparison
LC744440.1 See Comparison
NZ_AP023220.2 See Comparison
NZ_AP023434.1 See Comparison
NZ_CP095669.1 See Comparison
NZ_CP095655.1 See Comparison
NZ_CP095650.1 See Comparison
NZ_CP095670.1 See Comparison
NZ_CP095626.1 See Comparison
NZ_CP095621.1 See Comparison
NZ_CP095632.1 See Comparison
NZ_CP095606.1 See Comparison
NZ_CP095576.1 See Comparison
NZ_CP095622.1 See Comparison
NZ_CP095601.1 See Comparison
NZ_CP095611.1 See Comparison
NZ_CP095618.1 See Comparison
NZ_CP095663.1 See Comparison
NZ_CP095648.1 See Comparison
NZ_CP095595.1 See Comparison
NZ_CP095574.1 See Comparison
NZ_CP095619.1 See Comparison
NZ_CP095624.1 See Comparison
NZ_MZ892875.1 See Comparison
NZ_CP024836.1 See Comparison
NZ_CP024840.1 See Comparison
NZ_CP023895.1 See Comparison
NZ_CP095683.1 See Comparison
NZ_CP050367.1 See Comparison
NZ_AP023236.1 See Comparison
NZ_LC506720.1 See Comparison
NZ_LC506718.1 See Comparison
NZ_LC506717.1 See Comparison
NZ_KT725789.1 See Comparison
NZ_KT725788.1 See Comparison
NZ_CP127509.1 See Comparison
NZ_CP127512.1 See Comparison
NZ_KY130431.1 See Comparison
CP058801.1 See Comparison
NZ_CP053768.1 See Comparison
NZ_AP023454.1 See Comparison
NZ_AP018144.1 See Comparison
NZ_CP095595.1 See Comparison
NZ_CP054171.1 See Comparison
NZ_AP023434.1 See Comparison
NZ_CP095669.1 See Comparison
NZ_CP095655.1 See Comparison
NZ_CP095650.1 See Comparison
NZ_CP095670.1 See Comparison
NZ_CP095626.1 See Comparison
NZ_CP095621.1 See Comparison
LC744515.1 See Comparison
LC744512.1 See Comparison
LC744498.1 See Comparison
LC744497.1 See Comparison
LC744491.1 See Comparison
LC744488.1 See Comparison
LC744487.1 See Comparison
LC744480.1 See Comparison
LC744475.1 See Comparison
LC744473.1 See Comparison
LC744470.1 See Comparison
LC744467.1 See Comparison
LC744465.1 See Comparison
LC744449.1 See Comparison
LC744443.1 See Comparison
LC744440.1 See Comparison
NZ_CP095632.1 See Comparison
NZ_CP095606.1 See Comparison
NZ_CP095576.1 See Comparison
NZ_CP095622.1 See Comparison
NZ_CP095601.1 See Comparison
NZ_CP095611.1 See Comparison
NZ_CP095618.1 See Comparison
NZ_CP095663.1 See Comparison
NZ_CP095648.1 See Comparison
NZ_CP095574.1 See Comparison
NZ_CP095619.1 See Comparison
NZ_CP095624.1 See Comparison
CP058801.1 See Comparison
NZ_MZ892875.1 See Comparison
NZ_CP095681.1 See Comparison
NZ_CP095683.1 See Comparison
NZ_LC506720.1 See Comparison
NZ_LC506718.1 See Comparison
NZ_LC506717.1 See Comparison
NZ_KT725789.1 See Comparison
NZ_KT725788.1 See Comparison
NZ_AP018144.1 See Comparison
NZ_CP050367.1 See Comparison
NZ_AP023220.2 See Comparison
NZ_CP024836.1 See Comparison
NZ_CP024840.1 See Comparison
NZ_CP023895.1 See Comparison
NZ_CP127509.1 See Comparison
NZ_CP127512.1 See Comparison
NZ_KY130431.1 See Comparison
NZ_AP023236.1 See Comparison
NZ_CP053768.1 See Comparison
NZ_CP054171.1 See Comparison
NZ_AP023454.1 See Comparison
NZ_AP023434.1 See Comparison
LC744515.1 See Comparison
LC744512.1 See Comparison
LC744498.1 See Comparison
LC744497.1 See Comparison
LC744491.1 See Comparison
LC744488.1 See Comparison
LC744487.1 See Comparison
LC744480.1 See Comparison
LC744475.1 See Comparison
LC744473.1 See Comparison
LC744470.1 See Comparison
LC744467.1 See Comparison
LC744465.1 See Comparison
LC744449.1 See Comparison
LC744443.1 See Comparison
LC744440.1 See Comparison
NZ_CP095669.1 See Comparison
NZ_CP095648.1 See Comparison
NZ_CP095655.1 See Comparison
NZ_CP095650.1 See Comparison
NZ_CP095595.1 See Comparison
NZ_CP095574.1 See Comparison
NZ_CP095670.1 See Comparison
NZ_CP095626.1 See Comparison
NZ_CP095610.1 See Comparison
NZ_CP095621.1 See Comparison
NZ_CP095632.1 See Comparison
NZ_CP095606.1 See Comparison
NZ_CP095576.1 See Comparison
NZ_CP095622.1 See Comparison
NZ_CP095601.1 See Comparison
NZ_CP095611.1 See Comparison
NZ_CP095618.1 See Comparison
NZ_CP095663.1 See Comparison
NZ_MZ892875.1 See Comparison
NZ_CP095619.1 See Comparison
NZ_CP095624.1 See Comparison
NZ_CP024836.1 See Comparison
NZ_AP023220.2 See Comparison
NZ_CP024840.1 See Comparison
NZ_CP095681.1 See Comparison
NZ_CP023895.1 See Comparison
NZ_CP095683.1 See Comparison
NZ_CP127509.1 See Comparison
NZ_CP127512.1 See Comparison
CP058801.1 See Comparison
NZ_KY130431.1 See Comparison
NZ_CP053768.1 See Comparison
NZ_CP054171.1 See Comparison
NZ_AP023236.1 See Comparison
NZ_AP018144.1 See Comparison
NZ_CP050367.1 See Comparison
NZ_LC506720.1 See Comparison
NZ_LC506718.1 See Comparison
NZ_LC506717.1 See Comparison
NZ_KT725789.1 See Comparison
NZ_KT725788.1 See Comparison
NZ_AP023454.1 See Comparison
LC744515.1 See Comparison
LC744491.1 See Comparison
LC744488.1 See Comparison
LC744487.1 See Comparison
LC744480.1 See Comparison
LC744475.1 See Comparison
LC744473.1 See Comparison
LC744470.1 See Comparison
LC744512.1 See Comparison
LC744467.1 See Comparison
LC744465.1 See Comparison
LC744498.1 See Comparison
LC744449.1 See Comparison
LC744443.1 See Comparison
LC744440.1 See Comparison
LC744497.1 See Comparison
NZ_AP023434.1 See Comparison
NZ_CP095669.1 See Comparison
NZ_CP095650.1 See Comparison
NZ_CP095670.1 See Comparison
NZ_CP095626.1 See Comparison
NZ_CP095621.1 See Comparison
NZ_CP095632.1 See Comparison
NZ_CP095606.1 See Comparison
NZ_CP095576.1 See Comparison
NZ_CP095622.1 See Comparison
NZ_CP095601.1 See Comparison
NZ_CP095611.1 See Comparison
NZ_CP095618.1 See Comparison
NZ_CP095663.1 See Comparison
NZ_CP095648.1 See Comparison
NZ_CP095595.1 See Comparison
NZ_CP095574.1 See Comparison
NZ_CP095655.1 See Comparison
NZ_MZ892875.1 See Comparison
NZ_CP095619.1 See Comparison
NZ_CP095624.1 See Comparison
NZ_CP024836.1 See Comparison
NZ_AP023220.2 See Comparison
NZ_CP024840.1 See Comparison
NZ_CP023895.1 See Comparison
NZ_CP095681.1 See Comparison
NZ_CP095683.1 See Comparison
CP058801.1 See Comparison
NZ_CP127509.1 See Comparison
NZ_CP127512.1 See Comparison
NZ_KY130431.1 See Comparison
NZ_CP053768.1 See Comparison
NZ_AP018144.1 See Comparison
NZ_AP023236.1 See Comparison
NZ_LC506720.1 See Comparison
NZ_LC506718.1 See Comparison
NZ_LC506717.1 See Comparison
NZ_KT725789.1 See Comparison
NZ_KT725788.1 See Comparison
NZ_CP050367.1 See Comparison
LC744515.1 See Comparison
NZ_AP023454.1 See Comparison
NZ_CP054171.1 See Comparison
LC744491.1 See Comparison
LC744488.1 See Comparison
LC744487.1 See Comparison
LC744480.1 See Comparison
LC744512.1 See Comparison
LC744475.1 See Comparison
LC744473.1 See Comparison
LC744470.1 See Comparison
LC744467.1 See Comparison
LC744465.1 See Comparison
LC744498.1 See Comparison
LC744449.1 See Comparison
LC744443.1 See Comparison
LC744440.1 See Comparison
LC744497.1 See Comparison
NZ_CP024836.1 See Comparison
NZ_CP095626.1 See Comparison
NZ_CP095621.1 See Comparison
NZ_CP095632.1 See Comparison
NZ_CP095606.1 See Comparison
NZ_CP095576.1 See Comparison
NZ_CP095622.1 See Comparison
NZ_CP095601.1 See Comparison
NZ_CP095611.1 See Comparison
NZ_CP095618.1 See Comparison
NZ_CP095663.1 See Comparison
NZ_CP095648.1 See Comparison
NZ_CP095595.1 See Comparison
NZ_CP095574.1 See Comparison
NZ_CP095619.1 See Comparison
NZ_CP095624.1 See Comparison
NZ_MZ892875.1 See Comparison
NZ_AP023220.2 See Comparison
NZ_AP023434.1 See Comparison
NZ_CP095669.1 See Comparison
NZ_CP095655.1 See Comparison
NZ_CP095650.1 See Comparison
NZ_CP095670.1 See Comparison
NZ_CP024840.1 See Comparison
NZ_CP023895.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore