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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP050369.1
Sequence
Nucleotide Information
Accession
NZ_CP050369.1
Description
Klebsiella pneumoniae strain 47733 plasmid p47733S, complete sequence
Source
refseq
Topology
circular
Length
4715 bp
GC Content
0.41 %
Created at NCBI
April 1, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Assembly
Genome Data Information
Accession
GCF_011769725.1
Assembly Coverage
500
Biosample
Curated Collection Information
Accession
14421539
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
50.08N;14.36E
Original Query Type
coordinates
Coordinates (Lat/Lon)
50.08/14.36
Address
1152/66, Tomanova, Břevnov, Prague, obvod Praha 6, Prague, 169 00, Czechia
ECOSYSTEM
Original Query
Homo sapiens,Rectal swab
Classification
gastrointestinal_system,host_associated,rectal
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
concussion
DOID/SYMP
Traumatic brain injury
(
DOID:0081292
)
A brain disease that is characterized by brain dysfunction caused by an outside force, usually a violent blow to the head.
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_CP050370.1
NZ_CP050368.1
NZ_CP050367.1
NZ_CP050366.1
NZ_CP050365.1
NZ_CP050364.1
NZ_CP050363.1
NZ_CP050362.1
NZ_CP050361.1
Similar Plasmids
based on Mash distance
NZ_CP024434.1
See Comparison
NZ_CP062891.1
See Comparison
NZ_OW970546.1
See Comparison
NZ_CP116083.1
See Comparison
NZ_OW970558.1
See Comparison
NZ_OW970362.1
See Comparison
NZ_OW970419.1
See Comparison
NZ_OW970442.1
See Comparison
NZ_OW970498.1
See Comparison
NZ_OW970535.1
See Comparison
NZ_OW970483.1
See Comparison
NZ_OW970519.1
See Comparison
NZ_OW970566.1
See Comparison
NZ_OW970427.1
See Comparison
NZ_OW970490.1
See Comparison
NZ_OW970458.1
See Comparison
OW967821.1
See Comparison
NZ_OW970371.1
See Comparison
NZ_LN824137.1
See Comparison
NZ_OV049811.1
See Comparison
NZ_CP069209.1
See Comparison
NZ_CP024434.1
See Comparison
NZ_OW970442.1
See Comparison
NZ_CP062891.1
See Comparison
NZ_CP116083.1
See Comparison
NZ_OW970558.1
See Comparison
NZ_OW970362.1
See Comparison
NZ_OW970566.1
See Comparison
NZ_OW970419.1
See Comparison
NZ_OW970535.1
See Comparison
NZ_OW970546.1
See Comparison
NZ_OW970483.1
See Comparison
NZ_OW970498.1
See Comparison
NZ_OW970519.1
See Comparison
NZ_OW970490.1
See Comparison
NZ_OW970427.1
See Comparison
NZ_OW970458.1
See Comparison
NZ_OW970371.1
See Comparison
NZ_CP024434.1
See Comparison
OW967821.1
See Comparison
NZ_OV049811.1
See Comparison
NZ_LN824137.1
See Comparison
NZ_CP069209.1
See Comparison
NZ_CP062891.1
See Comparison
NZ_OW970442.1
See Comparison
NZ_OW970546.1
See Comparison
NZ_CP116083.1
See Comparison
NZ_OW970558.1
See Comparison
NZ_OW970362.1
See Comparison
NZ_OW970566.1
See Comparison
NZ_OW970419.1
See Comparison
NZ_OW970535.1
See Comparison
NZ_OW970483.1
See Comparison
NZ_OW970498.1
See Comparison
NZ_OW970427.1
See Comparison
NZ_OW970519.1
See Comparison
NZ_OW970490.1
See Comparison
NZ_OW970458.1
See Comparison
NZ_OW970371.1
See Comparison
OW967821.1
See Comparison
NZ_LN824137.1
See Comparison
NZ_OV049811.1
See Comparison
NZ_CP069209.1
See Comparison
NZ_CP024434.1
See Comparison
NZ_OW970558.1
See Comparison
NZ_CP062891.1
See Comparison
NZ_CP116083.1
See Comparison
NZ_OW970362.1
See Comparison
NZ_OW970566.1
See Comparison
NZ_OW970442.1
See Comparison
NZ_OW970419.1
See Comparison
NZ_OW970535.1
See Comparison
NZ_CP069209.1
See Comparison
NZ_OW970483.1
See Comparison
NZ_OW970519.1
See Comparison
NZ_OW970490.1
See Comparison
NZ_OW970458.1
See Comparison
NZ_OW970371.1
See Comparison
NZ_OW970546.1
See Comparison
NZ_OW970498.1
See Comparison
NZ_OW970427.1
See Comparison
OW967821.1
See Comparison
NZ_OW970442.1
See Comparison
NZ_CP024434.1
See Comparison
NZ_CP062891.1
See Comparison
NZ_OV049811.1
See Comparison
NZ_LN824137.1
See Comparison
NZ_CP116083.1
See Comparison
NZ_OW970535.1
See Comparison
NZ_OW970362.1
See Comparison
NZ_OW970483.1
See Comparison
NZ_OW970519.1
See Comparison
NZ_OW970566.1
See Comparison
NZ_OW970490.1
See Comparison
NZ_OW970458.1
See Comparison
NZ_OW970371.1
See Comparison
NZ_OW970419.1
See Comparison
NZ_OW970558.1
See Comparison
NZ_OW970546.1
See Comparison
NZ_OW970498.1
See Comparison
NZ_CP069209.1
See Comparison
NZ_OW970427.1
See Comparison
OW967821.1
See Comparison
NZ_LN824137.1
See Comparison
NZ_OV049811.1
See Comparison
NZ_CP024434.1
See Comparison
NZ_OW970558.1
See Comparison
NZ_CP050369.1
See Comparison
NZ_OW970519.1
See Comparison
NZ_OW970490.1
See Comparison
NZ_OW970458.1
See Comparison
NZ_CP062891.1
See Comparison
NZ_CP116083.1
See Comparison
NZ_OW970566.1
See Comparison
NZ_OW970362.1
See Comparison
NZ_OW970419.1
See Comparison
NZ_OW970442.1
See Comparison
NZ_OW970371.1
See Comparison
NZ_OW970546.1
See Comparison
OW967821.1
See Comparison
NZ_OW970498.1
See Comparison
NZ_OW970427.1
See Comparison
NZ_OW970535.1
See Comparison
NZ_OW970483.1
See Comparison
NZ_OV049811.1
See Comparison
NZ_CP069209.1
See Comparison
NZ_LN824137.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore