Plasmid NZ_CP047676.1

Sequence

Nucleotide Information

Accession	NZ_CP047676.1
Description	Klebsiella pneumoniae subsp. pneumoniae strain KUH-KPNHVF1 plasmid unnamed, complete sequence
Source	refseq
Topology	circular
Length	229024 bp
GC Content	0.50 %
Created at NCBI	Jan. 23, 2020

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (72407)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_009909325.1
Assembly Coverage	116.05

Biosample

Curated Collection Information

Accession	13503954

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	37.541N;125.98E
Original Query Type	coordinates
Coordinates (Lat/Lon)	37.54/125.98
Address	Ongjin-gun, Incheon, South Korea

ECOSYSTEM

Original Query	Homo sapiens,liver abscess
Classification	abscess,host_associated,liver
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	Liver abscess
DOID/SYMP	Hepatic abscess (SYMP:0000295 ) hepatic abscess is a liver symptom characterized by a pus-filled mass in the liver that can develop from injury to the liver or an intraabdominal infection disseminated from the portal circulation. Liver disease (DOID:409 ) None

Original Query

Liver abscess

DOID/SYMP

Hepatic abscess (SYMP:0000295 )

Liver disease (DOID:409 )

Visualization

Similar Plasmids

based on Mash distance

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NZ_MZ475697.1	See Comparison
NZ_CP084867.1	See Comparison
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NZ_MT269852.1	See Comparison
NZ_CP072493.1	See Comparison
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NC_006625.1	See Comparison
NZ_OR388867.1	See Comparison
NZ_OR388870.1	See Comparison
NZ_CP136533.1	See Comparison
NZ_CP135188.1	See Comparison
NZ_CP144360.1	See Comparison
NZ_CP132622.1	See Comparison
CP128676.1	See Comparison
CP128659.1	See Comparison
CP128655.1	See Comparison
NZ_CP125085.1	See Comparison
NZ_CP155642.1	See Comparison
NZ_CP152064.1	See Comparison
NZ_CP151754.1	See Comparison
NZ_CP151760.1	See Comparison
NZ_CP151757.1	See Comparison
NZ_CP132684.1	See Comparison
NZ_CP132630.1	See Comparison
NZ_CP132614.1	See Comparison
NZ_CP122574.1	See Comparison
NZ_CP144338.1	See Comparison
NZ_CP144308.1	See Comparison
NZ_CP144314.1	See Comparison
CP052163.1	See Comparison
NZ_CP152337.1	See Comparison
NZ_MG053312.1	See Comparison
CP052159.1	See Comparison
CP052144.1	See Comparison
CP052563.1	See Comparison
CP052495.1	See Comparison
CP052178.1	See Comparison
CP052357.1	See Comparison
NZ_AP019549.1	See Comparison
CP052190.1	See Comparison
CP052304.1	See Comparison
CP052204.1	See Comparison
NZ_CP047678.1	See Comparison
NZ_CP064233.1	See Comparison
NZ_CP069941.1	See Comparison
NZ_CP026024.1	See Comparison
NZ_CP026012.1	See Comparison
NZ_MT496757.1	See Comparison
NZ_CP064230.1	See Comparison
NZ_CP064206.1	See Comparison
NZ_CP028852.1	See Comparison
NZ_CP063891.1	See Comparison
NZ_CP118907.1	See Comparison
NZ_CP063278.1	See Comparison
NZ_CP096243.1	See Comparison
CP046893.1	See Comparison
NZ_CP096235.1	See Comparison
NZ_CP096239.1	See Comparison
CP110764.1	See Comparison
NZ_CP107015.1	See Comparison
NZ_ON081625.1	See Comparison
CP102436.1	See Comparison
NZ_CP027867.1	See Comparison
NZ_CP043581.1	See Comparison
CP069366.1	See Comparison
NZ_CP089235.1	See Comparison
CP067778.1	See Comparison
NZ_CP091059.1	See Comparison
NZ_CP091062.1	See Comparison
NZ_CP053863.1	See Comparison
NZ_CP090243.1	See Comparison
NZ_CP089599.1	See Comparison
NZ_CP088984.1	See Comparison
CP089869.1	See Comparison
CP089860.1	See Comparison
NZ_CP089030.1	See Comparison
NZ_CP089023.1	See Comparison
NZ_MZ475709.1	See Comparison
NZ_MZ475703.1	See Comparison
NZ_MZ475697.1	See Comparison
NZ_CP084867.1	See Comparison
NZ_CP072493.1	See Comparison
NZ_CP073286.1	See Comparison
NZ_CP019049.1	See Comparison
LR134257.1	See Comparison
NZ_CP014011.1	See Comparison
NZ_CP014009.1	See Comparison
NZ_CP037743.1	See Comparison
NZ_CP025081.1	See Comparison
NZ_CP034083.1	See Comparison
NC_006625.1	See Comparison
NZ_OR388867.1	See Comparison
NZ_OR388870.1	See Comparison
NZ_CP135188.1	See Comparison
NZ_CP136533.1	See Comparison
NZ_CP132684.1	See Comparison
NZ_CP132630.1	See Comparison
NZ_MT269852.1	See Comparison
NZ_CP132614.1	See Comparison
NZ_CP132622.1	See Comparison
NZ_CP122574.1	See Comparison
CP128676.1	See Comparison
CP128659.1	See Comparison
CP128655.1	See Comparison
NZ_CP125085.1	See Comparison
NZ_CP155642.1	See Comparison
NZ_CP151754.1	See Comparison
NZ_CP152337.1	See Comparison
NZ_CP151760.1	See Comparison
NZ_CP151757.1	See Comparison
NZ_CP144360.1	See Comparison
NZ_CP152064.1	See Comparison
NZ_CP144338.1	See Comparison
NZ_CP144308.1	See Comparison
NZ_CP144314.1	See Comparison
CP052178.1	See Comparison
CP052159.1	See Comparison
CP052144.1	See Comparison
CP052563.1	See Comparison
CP052495.1	See Comparison
NZ_AP019549.1	See Comparison
NZ_MG053312.1	See Comparison
CP052357.1	See Comparison
CP052190.1	See Comparison
CP052304.1	See Comparison
CP052204.1	See Comparison
CP052163.1	See Comparison
NZ_CP047678.1	See Comparison
NZ_CP064233.1	See Comparison
NZ_CP069941.1	See Comparison
NZ_MT496757.1	See Comparison
NZ_CP026024.1	See Comparison
NZ_CP026012.1	See Comparison
NZ_CP064230.1	See Comparison
NZ_CP064206.1	See Comparison
NZ_CP063278.1	See Comparison
NZ_CP028852.1	See Comparison
NZ_CP063891.1	See Comparison
CP110764.1	See Comparison
NZ_CP118907.1	See Comparison
CP046893.1	See Comparison
NZ_CP096243.1	See Comparison
NZ_CP096239.1	See Comparison
NZ_CP096235.1	See Comparison
NZ_CP027867.1	See Comparison
CP102436.1	See Comparison
NZ_CP107015.1	See Comparison
CP069366.1	See Comparison
NZ_ON081625.1	See Comparison
NZ_CP043581.1	See Comparison
NZ_CP089235.1	See Comparison
CP067778.1	See Comparison
NZ_CP091059.1	See Comparison
NZ_CP091062.1	See Comparison
NZ_CP053863.1	See Comparison
NZ_CP090243.1	See Comparison
NZ_CP088984.1	See Comparison
NZ_CP089599.1	See Comparison
CP089869.1	See Comparison
CP089860.1	See Comparison
NZ_MZ475709.1	See Comparison
NZ_CP089030.1	See Comparison
NZ_CP089023.1	See Comparison
NZ_MZ475703.1	See Comparison
NZ_MZ475697.1	See Comparison
NZ_CP084867.1	See Comparison
NZ_CP019049.1	See Comparison
NZ_CP073286.1	See Comparison
NZ_MT269852.1	See Comparison
NZ_CP072493.1	See Comparison
LR134257.1	See Comparison
NZ_CP014011.1	See Comparison
NZ_CP014009.1	See Comparison
NZ_CP037743.1	See Comparison
NZ_CP034083.1	See Comparison
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NC_006625.1	See Comparison
NZ_OR388867.1	See Comparison
NZ_OR388870.1	See Comparison
NZ_CP136533.1	See Comparison
NZ_CP135188.1	See Comparison
NZ_CP132684.1	See Comparison
NZ_CP132630.1	See Comparison
NZ_CP132614.1	See Comparison
NZ_CP132622.1	See Comparison
CP052178.1	See Comparison
NZ_CP151754.1	See Comparison
NZ_CP151760.1	See Comparison
NZ_CP151757.1	See Comparison
NZ_CP144360.1	See Comparison
NZ_CP144338.1	See Comparison
NZ_CP144308.1	See Comparison
NZ_CP144314.1	See Comparison
NZ_MG053312.1	See Comparison
CP052190.1	See Comparison
CP052304.1	See Comparison
CP052204.1	See Comparison
CP128676.1	See Comparison
CP128659.1	See Comparison
CP128655.1	See Comparison
NZ_CP125085.1	See Comparison
NZ_CP122574.1	See Comparison
NZ_CP155642.1	See Comparison
NZ_CP152337.1	See Comparison
NZ_CP152064.1	See Comparison
CP052563.1	See Comparison
CP052495.1	See Comparison
CP052163.1	See Comparison
CP052159.1	See Comparison
CP052144.1	See Comparison
NZ_AP019549.1	See Comparison
CP052357.1	See Comparison
NZ_CP047678.1	See Comparison
NZ_MT496757.1	See Comparison
NZ_CP069941.1	See Comparison
NZ_CP026024.1	See Comparison
NZ_CP026012.1	See Comparison
NZ_CP064233.1	See Comparison
NZ_CP064230.1	See Comparison
NZ_CP064206.1	See Comparison
NZ_CP028852.1	See Comparison
NZ_CP063891.1	See Comparison
NZ_CP063278.1	See Comparison
CP110764.1	See Comparison
NZ_CP118907.1	See Comparison
CP046893.1	See Comparison
NZ_CP096243.1	See Comparison
NZ_CP096239.1	See Comparison
NZ_CP096235.1	See Comparison
NZ_CP107015.1	See Comparison
NZ_CP027867.1	See Comparison
NZ_CP043581.1	See Comparison
NZ_ON081625.1	See Comparison
CP102436.1	See Comparison
NZ_CP091059.1	See Comparison
CP067778.1	See Comparison
CP069366.1	See Comparison
NZ_CP091062.1	See Comparison
NZ_CP053863.1	See Comparison
NZ_CP089235.1	See Comparison
NZ_CP089599.1	See Comparison
NZ_CP090243.1	See Comparison
CP089869.1	See Comparison
CP089860.1	See Comparison
NZ_CP089030.1	See Comparison
NZ_CP089023.1	See Comparison
NZ_CP088984.1	See Comparison
NZ_CP073286.1	See Comparison
NZ_MZ475709.1	See Comparison
NZ_MZ475703.1	See Comparison
NZ_MZ475697.1	See Comparison
NZ_CP084867.1	See Comparison
NZ_MT269852.1	See Comparison
NZ_CP014011.1	See Comparison
NZ_CP019049.1	See Comparison
NZ_CP072493.1	See Comparison
NZ_CP014009.1	See Comparison
NZ_CP025081.1	See Comparison
LR134257.1	See Comparison
NZ_CP034083.1	See Comparison
NZ_CP037743.1	See Comparison
NZ_OR388867.1	See Comparison
NC_006625.1	See Comparison
NZ_OR388870.1	See Comparison
NZ_CP136533.1	See Comparison
NZ_CP155642.1	See Comparison
NZ_CP132684.1	See Comparison
NZ_CP132630.1	See Comparison
NZ_CP132614.1	See Comparison
NZ_CP132622.1	See Comparison
CP128676.1	See Comparison
CP128659.1	See Comparison
CP128655.1	See Comparison
NZ_CP125085.1	See Comparison
NZ_CP122574.1	See Comparison
NZ_CP135188.1	See Comparison
NZ_CP152337.1	See Comparison
NZ_CP151754.1	See Comparison
NZ_CP151760.1	See Comparison
NZ_CP151757.1	See Comparison
NZ_CP152064.1	See Comparison
NZ_CP144360.1	See Comparison
NZ_CP144338.1	See Comparison
NZ_CP144308.1	See Comparison
NZ_CP144314.1	See Comparison
CP052178.1	See Comparison
NZ_MG053312.1	See Comparison
CP052495.1	See Comparison
CP052204.1	See Comparison
CP052163.1	See Comparison
CP052159.1	See Comparison
CP052144.1	See Comparison
CP052563.1	See Comparison
CP052357.1	See Comparison
NZ_MT496757.1	See Comparison
CP052190.1	See Comparison
CP052304.1	See Comparison
NZ_AP019549.1	See Comparison
NZ_CP047678.1	See Comparison
NZ_CP047676.1	See Comparison
NZ_CP026024.1	See Comparison
NZ_CP026012.1	See Comparison
NZ_CP069941.1	See Comparison
NZ_CP118907.1	See Comparison
NZ_CP064233.1	See Comparison
NZ_CP064230.1	See Comparison
NZ_CP064206.1	See Comparison
NZ_CP028852.1	See Comparison
NZ_CP063891.1	See Comparison
NZ_CP063278.1	See Comparison
CP102436.1	See Comparison
CP110764.1	See Comparison
NZ_CP027867.1	See Comparison
CP046893.1	See Comparison
NZ_CP096243.1	See Comparison
NZ_CP096239.1	See Comparison
NZ_CP096235.1	See Comparison
NZ_CP107015.1	See Comparison
NZ_ON081625.1	See Comparison
CP067778.1	See Comparison
NZ_CP043581.1	See Comparison
CP069366.1	See Comparison
NZ_CP089235.1	See Comparison
NZ_CP091059.1	See Comparison
NZ_CP091062.1	See Comparison
NZ_CP053863.1	See Comparison
NZ_CP090243.1	See Comparison
NZ_CP089599.1	See Comparison
CP089869.1	See Comparison
CP089860.1	See Comparison
NZ_CP089030.1	See Comparison
NZ_CP089023.1	See Comparison
NZ_CP088984.1	See Comparison
NZ_CP084867.1	See Comparison
NZ_CP019049.1	See Comparison
NZ_MZ475709.1	See Comparison
NZ_MZ475703.1	See Comparison
NZ_MZ475697.1	See Comparison
NZ_CP073286.1	See Comparison
NZ_MT269852.1	See Comparison
NZ_CP072493.1	See Comparison
NZ_CP014011.1	See Comparison
NZ_CP014009.1	See Comparison
NZ_CP034083.1	See Comparison
NZ_CP037743.1	See Comparison
NZ_CP135188.1	See Comparison
LR134257.1	See Comparison
NZ_CP025081.1	See Comparison
NC_006625.1	See Comparison
NZ_OR388867.1	See Comparison
NZ_OR388870.1	See Comparison
NZ_CP136533.1	See Comparison
NZ_CP155642.1	See Comparison
NZ_CP132684.1	See Comparison
NZ_CP132630.1	See Comparison
NZ_CP132614.1	See Comparison
NZ_CP132622.1	See Comparison
CP128676.1	See Comparison
CP128659.1	See Comparison
CP128655.1	See Comparison
NZ_CP125085.1	See Comparison
NZ_CP152064.1	See Comparison
NZ_CP122574.1	See Comparison
NZ_CP151754.1	See Comparison
NZ_CP151760.1	See Comparison
NZ_CP151757.1	See Comparison
NZ_CP144360.1	See Comparison
NZ_CP152337.1	See Comparison
NZ_CP144338.1	See Comparison
NZ_CP144308.1	See Comparison
NZ_CP144314.1	See Comparison
CP052178.1	See Comparison
NZ_MG053312.1	See Comparison
CP052163.1	See Comparison
CP052159.1	See Comparison
CP052144.1	See Comparison
CP052357.1	See Comparison
CP052563.1	See Comparison
CP052190.1	See Comparison
CP052495.1	See Comparison
CP052304.1	See Comparison
CP052204.1	See Comparison
NZ_CP047678.1	See Comparison
NZ_AP019549.1	See Comparison
NZ_CP064233.1	See Comparison
NZ_CP026024.1	See Comparison
NZ_CP026012.1	See Comparison
NZ_CP069941.1	See Comparison
NZ_MT496757.1	See Comparison
NZ_CP064230.1	See Comparison
NZ_CP064206.1	See Comparison
NZ_CP028852.1	See Comparison
NZ_CP063891.1	See Comparison
CP069366.1	See Comparison
NZ_CP063278.1	See Comparison
CP046893.1	See Comparison
NZ_CP096243.1	See Comparison
NZ_CP096239.1	See Comparison
NZ_CP096235.1	See Comparison
NZ_CP107015.1	See Comparison
CP102436.1	See Comparison
NZ_CP118907.1	See Comparison
CP110764.1	See Comparison
NZ_CP027867.1	See Comparison
NZ_ON081625.1	See Comparison
NZ_CP043581.1	See Comparison
NZ_CP089235.1	See Comparison
NZ_CP090243.1	See Comparison
CP067778.1	See Comparison
NZ_CP091059.1	See Comparison
NZ_CP091062.1	See Comparison
NZ_CP053863.1	See Comparison
NZ_CP089030.1	See Comparison
NZ_CP089599.1	See Comparison
CP089869.1	See Comparison
NZ_CP089023.1	See Comparison
CP089860.1	See Comparison
NZ_CP088984.1	See Comparison
NZ_MZ475709.1	See Comparison
NZ_MZ475703.1	See Comparison
NZ_MZ475697.1	See Comparison
NZ_CP084867.1	See Comparison
NZ_CP073286.1	See Comparison
NZ_MT269852.1	See Comparison
NZ_CP014011.1	See Comparison
NZ_CP072493.1	See Comparison
NZ_CP019049.1	See Comparison
NZ_CP014009.1	See Comparison
NZ_CP037743.1	See Comparison
LR134257.1	See Comparison
NZ_CP025081.1	See Comparison
NZ_CP034083.1	See Comparison
NZ_CP132684.1	See Comparison
NZ_CP135188.1	See Comparison
NC_006625.1	See Comparison
NZ_OR388867.1	See Comparison
NZ_OR388870.1	See Comparison
NZ_CP136533.1	See Comparison
NZ_CP132630.1	See Comparison
NZ_CP132614.1	See Comparison
NZ_CP132622.1	See Comparison
NZ_CP155642.1	See Comparison
CP128676.1	See Comparison
CP128659.1	See Comparison
CP128655.1	See Comparison
NZ_CP125085.1	See Comparison
NZ_CP122574.1	See Comparison
NZ_CP152064.1	See Comparison
NZ_CP152337.1	See Comparison
NZ_CP151754.1	See Comparison
NZ_CP151760.1	See Comparison
NZ_CP151757.1	See Comparison
NZ_CP144360.1	See Comparison
NZ_CP144338.1	See Comparison
NZ_CP144308.1	See Comparison
NZ_CP144314.1	See Comparison
NZ_MG053312.1	See Comparison
CP052357.1	See Comparison
CP052178.1	See Comparison
CP052163.1	See Comparison
CP052159.1	See Comparison
CP052144.1	See Comparison
CP052563.1	See Comparison
CP052190.1	See Comparison
CP052495.1	See Comparison
CP052304.1	See Comparison
CP052204.1	See Comparison
NZ_CP069941.1	See Comparison
NZ_AP019549.1	See Comparison
NZ_CP047678.1	See Comparison
NZ_CP026024.1	See Comparison
NZ_CP026012.1	See Comparison
NZ_MT496757.1	See Comparison
NZ_CP064233.1	See Comparison
NZ_CP063278.1	See Comparison
NZ_CP064230.1	See Comparison
NZ_CP064206.1	See Comparison
NZ_CP028852.1	See Comparison
NZ_CP063891.1	See Comparison
CP046893.1	See Comparison
NZ_CP118907.1	See Comparison
NZ_CP096235.1	See Comparison
NZ_CP027867.1	See Comparison
NZ_CP096243.1	See Comparison
NZ_CP096239.1	See Comparison
CP110764.1	See Comparison
CP102436.1	See Comparison
NZ_CP107015.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore