Plasmid NZ_CP132622.1

Sequence

Nucleotide Information

Accession NZ_CP132622.1
Description Klebsiella pneumoniae strain 16006 plasmid p1, complete sequence
Source refseq
Topology circular
Length 224670 bp
GC Content 0.50 %
Created at NCBI Aug. 24, 2023



Assembly

Genome Data Information

Accession GCF_030845495.1
Assembly Coverage 400


Biosample

Curated Collection Information
Accession 36071310

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,North Caroline
Original Query Type name
Coordinates (Lat/Lon) 35.39/-80.71
Address USA,North Caroline

ECOSYSTEM
Original Query Homo sapiens,respiratory
Classification host_associated,respiratory_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_CP014011.1 See Comparison
NZ_CP034083.1 See Comparison
NZ_OR388867.1 See Comparison
NZ_OR388870.1 See Comparison
NZ_CP136533.1 See Comparison
NZ_CP135188.1 See Comparison
NZ_CP151754.1 See Comparison
NZ_CP151760.1 See Comparison
NZ_CP151757.1 See Comparison
NZ_CP144338.1 See Comparison
NZ_CP144308.1 See Comparison
CP052563.1 See Comparison
NZ_CP047678.1 See Comparison
NZ_CP047676.1 See Comparison
NZ_CP069941.1 See Comparison
NZ_MT496757.1 See Comparison
NZ_CP064233.1 See Comparison
NZ_CP064230.1 See Comparison
NZ_CP063891.1 See Comparison
CP046893.1 See Comparison
NZ_CP096243.1 See Comparison
NZ_CP096235.1 See Comparison
NZ_CP027867.1 See Comparison
NZ_CP091059.1 See Comparison
NZ_CP043581.1 See Comparison
CP067778.1 See Comparison
NZ_CP135188.1 See Comparison
NZ_CP034083.1 See Comparison
NZ_OR388867.1 See Comparison
NZ_OR388870.1 See Comparison
NZ_CP136533.1 See Comparison
NZ_CP014011.1 See Comparison
NZ_CP132622.1 See Comparison
NZ_CP144308.1 See Comparison
NZ_CP151754.1 See Comparison
NZ_CP151760.1 See Comparison
NZ_CP151757.1 See Comparison
CP052563.1 See Comparison
NZ_CP144338.1 See Comparison
NZ_CP047678.1 See Comparison
NZ_CP047676.1 See Comparison
NZ_MT496757.1 See Comparison
NZ_CP069941.1 See Comparison
CP046893.1 See Comparison
NZ_CP064233.1 See Comparison
NZ_CP064230.1 See Comparison
NZ_CP063891.1 See Comparison
NZ_CP096243.1 See Comparison
NZ_CP096235.1 See Comparison
NZ_CP027867.1 See Comparison
NZ_CP043581.1 See Comparison
NZ_CP091059.1 See Comparison
CP067778.1 See Comparison
NZ_CP135188.1 See Comparison
NZ_OR388867.1 See Comparison
NZ_OR388870.1 See Comparison
NZ_CP136533.1 See Comparison
NZ_CP014011.1 See Comparison
NZ_CP034083.1 See Comparison
NZ_MT496757.1 See Comparison
CP052563.1 See Comparison
NZ_CP069941.1 See Comparison
NZ_CP151754.1 See Comparison
NZ_CP151760.1 See Comparison
NZ_CP151757.1 See Comparison
NZ_CP144338.1 See Comparison
NZ_CP144308.1 See Comparison
NZ_CP047678.1 See Comparison
NZ_CP047676.1 See Comparison
NZ_CP027867.1 See Comparison
NZ_CP064233.1 See Comparison
NZ_CP064230.1 See Comparison
NZ_CP063891.1 See Comparison
CP046893.1 See Comparison
NZ_CP096243.1 See Comparison
NZ_CP096235.1 See Comparison
NZ_CP043581.1 See Comparison
NZ_CP014011.1 See Comparison
CP067778.1 See Comparison
NZ_CP091059.1 See Comparison
NZ_CP034083.1 See Comparison
NZ_CP135188.1 See Comparison
NZ_OR388867.1 See Comparison
NZ_OR388870.1 See Comparison
NZ_CP136533.1 See Comparison
NZ_CP069941.1 See Comparison
NZ_CP151754.1 See Comparison
NZ_CP151760.1 See Comparison
NZ_CP151757.1 See Comparison
NZ_CP144338.1 See Comparison
NZ_CP144308.1 See Comparison
CP052563.1 See Comparison
NZ_CP047678.1 See Comparison
NZ_CP047676.1 See Comparison
NZ_MT496757.1 See Comparison
CP046893.1 See Comparison
NZ_CP064233.1 See Comparison
NZ_CP064230.1 See Comparison
NZ_CP063891.1 See Comparison
NZ_CP096243.1 See Comparison
NZ_CP096235.1 See Comparison
NZ_CP027867.1 See Comparison
CP046893.1 See Comparison
NZ_CP034083.1 See Comparison
NZ_CP135188.1 See Comparison
NZ_CP151754.1 See Comparison
NZ_CP151760.1 See Comparison
NZ_CP151757.1 See Comparison
NZ_CP144338.1 See Comparison
NZ_CP144308.1 See Comparison
CP052563.1 See Comparison
NZ_CP069941.1 See Comparison
NZ_MT496757.1 See Comparison
NZ_CP064233.1 See Comparison
NZ_CP043581.1 See Comparison
CP067778.1 See Comparison
NZ_CP091059.1 See Comparison
NZ_CP014011.1 See Comparison
NZ_OR388867.1 See Comparison
NZ_OR388870.1 See Comparison
NZ_CP136533.1 See Comparison
NZ_CP047678.1 See Comparison
NZ_CP047676.1 See Comparison
NZ_CP064230.1 See Comparison
NZ_CP063891.1 See Comparison
NZ_CP096243.1 See Comparison
NZ_CP096235.1 See Comparison
NZ_CP027867.1 See Comparison
NZ_CP014011.1 See Comparison
NZ_CP043581.1 See Comparison
CP067778.1 See Comparison
NZ_CP091059.1 See Comparison
NZ_CP034083.1 See Comparison
NZ_OR388867.1 See Comparison
NZ_OR388870.1 See Comparison
NZ_CP136533.1 See Comparison
NZ_CP069941.1 See Comparison
NZ_CP135188.1 See Comparison
NZ_CP151754.1 See Comparison
NZ_CP151760.1 See Comparison
NZ_CP151757.1 See Comparison
CP052563.1 See Comparison
NZ_CP047678.1 See Comparison
NZ_CP047676.1 See Comparison
NZ_CP144338.1 See Comparison
NZ_CP144308.1 See Comparison
NZ_CP064233.1 See Comparison
NZ_MT496757.1 See Comparison
NZ_CP064230.1 See Comparison
NZ_CP063891.1 See Comparison
NZ_CP135188.1 See Comparison
CP046893.1 See Comparison
NZ_CP096243.1 See Comparison
NZ_CP043581.1 See Comparison
NZ_CP096235.1 See Comparison
NZ_CP027867.1 See Comparison
CP067778.1 See Comparison
NZ_CP091059.1 See Comparison
NZ_CP014011.1 See Comparison
NZ_CP034083.1 See Comparison
NZ_OR388867.1 See Comparison
NZ_OR388870.1 See Comparison
NZ_CP136533.1 See Comparison
NZ_CP064230.1 See Comparison
NZ_CP151754.1 See Comparison
NZ_CP151760.1 See Comparison
NZ_CP151757.1 See Comparison
NZ_CP144338.1 See Comparison
NZ_CP144308.1 See Comparison
NZ_CP047678.1 See Comparison
NZ_CP047676.1 See Comparison
CP052563.1 See Comparison
NZ_CP069941.1 See Comparison
NZ_CP063891.1 See Comparison
NZ_CP064233.1 See Comparison
NZ_MT496757.1 See Comparison
NZ_CP027867.1 See Comparison
CP046893.1 See Comparison
NZ_CP096243.1 See Comparison
NZ_CP096235.1 See Comparison
NZ_CP043581.1 See Comparison
CP067778.1 See Comparison
NZ_CP091059.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2