Plasmid NZ_CP026714.1

Sequence

Nucleotide Information

Accession	NZ_CP026714.1
Description	Salmonella enterica strain FORC_078 plasmid pFORC_078_2, complete sequence
Source	refseq
Topology	circular
Length	59333 bp
GC Content	0.52 %
Created at NCBI	Feb. 7, 2019

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Salmonella enterica (28901)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Salmonella (590)
Species	Salmonella_enterica (28901)
Strain

Assembly

Genome Data Information

Accession	GCF_004135835.1
Assembly Coverage	195

Biosample

Curated Collection Information

Accession	8449845

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	36.86590966N;127.55281711E
Original Query Type	coordinates
Coordinates (Lat/Lon)	36.87/127.55
Address	Geumgok-ri, Jincheon-gun, North Chungcheong, 27857, South Korea

ECOSYSTEM

Original Query	Homo sapiens,stool
Classification	fecal,gastrointestinal_system,host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	food poisoning
DOID/SYMP	Staphyloenterotoxemia (DOID:96 ) A primary bacterial infectious disease that results_in infection located_in intestine caused by eating food contaminated with enterotoxins produced by bacteria, has_material_basis_in Staphylococcus aureus. The infection has_symptom diarrhea, has_symptom vomiting, has_symptom nausea, has_symptom cramps, and has_symptom weakness. Has_material_basis_in: ['staphylococcus aureus']

Original Query

food poisoning

DOID/SYMP

Staphyloenterotoxemia (DOID:96 )

Has_material_basis_in: ['staphylococcus aureus']

Visualization

Similar Plasmids

based on Mash distance

NZ_CP066048.1	See Comparison
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CP092308.1	See Comparison
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NZ_CP075119.1	See Comparison
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CP074253.1	See Comparison
CP074239.1	See Comparison
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KT317611.1	See Comparison
NZ_CP043434.1	See Comparison
NZ_CP030796.1	See Comparison
NZ_CP023437.1	See Comparison
NZ_CP040647.1	See Comparison
NZ_CP040645.1	See Comparison
NZ_CP033089.1	See Comparison
CP032850.1	See Comparison
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NZ_CP015525.1	See Comparison
NZ_CP015527.1	See Comparison
NZ_CP025557.1	See Comparison
NZ_CP018639.1	See Comparison
NZ_CP018641.1	See Comparison
NZ_CP018660.1	See Comparison
NZ_CP018650.1	See Comparison
NZ_CP018636.1	See Comparison
NZ_CP017178.1	See Comparison
NZ_CP022004.1	See Comparison
NZ_CP065123.1	See Comparison
NZ_CP136646.1	See Comparison
NZ_CP120323.1	See Comparison
NZ_CP126167.1	See Comparison
NZ_CP133566.1	See Comparison
NZ_CP133430.1	See Comparison
NZ_CP133427.1	See Comparison
NZ_CP133439.1	See Comparison
NZ_CP133433.1	See Comparison
NZ_CP133436.1	See Comparison
NZ_CP120319.1	See Comparison
NZ_CP120316.1	See Comparison
NZ_CP050711.1	See Comparison
NZ_CP124523.1	See Comparison
NZ_CP011843.1	See Comparison
NZ_CP011840.1	See Comparison
NZ_CP140791.1	See Comparison
NZ_CP140780.1	See Comparison
NZ_HG970000.1	See Comparison
NZ_KT317612.1	See Comparison
NZ_CP050714.1	See Comparison
NZ_CP050718.1	See Comparison
NZ_CP050722.1	See Comparison
NZ_CP050708.1	See Comparison
NZ_CP041972.1	See Comparison
NZ_CP066048.1	See Comparison
NZ_CP063291.1	See Comparison
NZ_CP063709.1	See Comparison
NZ_CP063701.1	See Comparison
NZ_CP104363.1	See Comparison
NZ_CP104644.1	See Comparison
NZ_CP060523.1	See Comparison
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NZ_CP110221.1	See Comparison
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CP092322.1	See Comparison
CP092319.1	See Comparison
CP092331.1	See Comparison
CP092310.1	See Comparison
CP092327.1	See Comparison
CP092308.1	See Comparison
CP092306.1	See Comparison
CP092292.1	See Comparison
NZ_CP084533.1	See Comparison
NZ_CP075123.1	See Comparison
NZ_CP075121.1	See Comparison
NZ_CP075119.1	See Comparison
NZ_CP080092.1	See Comparison
CP074315.1	See Comparison
CP074255.1	See Comparison
CP074253.1	See Comparison
CP074239.1	See Comparison
NZ_CP082917.1	See Comparison
NZ_CP020826.1	See Comparison
NZ_CP020824.1	See Comparison
NC_019120.1	See Comparison
NZ_CP011943.1	See Comparison
NZ_CP007508.1	See Comparison
NZ_CP008927.1	See Comparison
NZ_CP007529.1	See Comparison
NZ_CP013098.1	See Comparison
KT317613.1	See Comparison
KT317611.1	See Comparison
NZ_CP040647.1	See Comparison
NZ_CP043434.1	See Comparison
NZ_CP041178.1	See Comparison
NZ_CP040645.1	See Comparison
NZ_CP026714.1	See Comparison
NZ_CP033089.1	See Comparison
CP032850.1	See Comparison
NZ_CP030796.1	See Comparison
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NZ_CP025557.1	See Comparison
NZ_CP026054.1	See Comparison
NZ_CP015525.1	See Comparison
NZ_CP018639.1	See Comparison
NZ_CP018641.1	See Comparison
NZ_CP018660.1	See Comparison
NZ_CP018650.1	See Comparison
NZ_CP018636.1	See Comparison
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NZ_CP017178.1	See Comparison
NZ_CP022004.1	See Comparison
NZ_CP136646.1	See Comparison
NZ_CP065123.1	See Comparison
NZ_CP133566.1	See Comparison
NZ_CP120323.1	See Comparison
NZ_CP133430.1	See Comparison
NZ_CP133427.1	See Comparison
NZ_CP133439.1	See Comparison
NZ_CP133433.1	See Comparison
NZ_CP133436.1	See Comparison
NZ_CP126167.1	See Comparison
NZ_CP120319.1	See Comparison
NZ_CP120316.1	See Comparison
NZ_CP124523.1	See Comparison
NZ_HG970000.1	See Comparison
NZ_CP140791.1	See Comparison
NZ_CP140780.1	See Comparison
NZ_CP063709.1	See Comparison
NZ_CP050711.1	See Comparison
NZ_CP050714.1	See Comparison
NZ_CP050718.1	See Comparison
NZ_CP050722.1	See Comparison
NZ_CP050708.1	See Comparison
NZ_KT317612.1	See Comparison
NZ_CP011843.1	See Comparison
NZ_CP011840.1	See Comparison
NZ_CP066048.1	See Comparison
NZ_CP063701.1	See Comparison
NZ_CP060523.1	See Comparison
NZ_CP063291.1	See Comparison
NZ_MN125607.1	See Comparison
NZ_CP104363.1	See Comparison
NZ_CP110221.1	See Comparison
NZ_CP041972.1	See Comparison
NZ_CP104644.1	See Comparison
NZ_CP104359.1	See Comparison
NZ_CP080092.1	See Comparison
NZ_CP084533.1	See Comparison
NZ_CP082917.1	See Comparison
CP092322.1	See Comparison
CP092319.1	See Comparison
CP092331.1	See Comparison
CP092310.1	See Comparison
CP092327.1	See Comparison
CP092308.1	See Comparison
CP092306.1	See Comparison
CP092292.1	See Comparison
NZ_CP075123.1	See Comparison
NZ_CP075121.1	See Comparison
NZ_CP075119.1	See Comparison
NZ_CP074427.1	See Comparison
CP074315.1	See Comparison
CP074255.1	See Comparison
CP074253.1	See Comparison
CP074239.1	See Comparison
NZ_CP011943.1	See Comparison
NZ_CP020826.1	See Comparison
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NZ_CP007508.1	See Comparison
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KT317611.1	See Comparison
NZ_CP008927.1	See Comparison
NZ_CP007529.1	See Comparison
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NZ_CP040647.1	See Comparison
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NZ_CP017178.1	See Comparison
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NZ_CP018660.1	See Comparison
NZ_CP018650.1	See Comparison
NZ_KT317612.1	See Comparison
NZ_CP022004.1	See Comparison
NZ_CP136646.1	See Comparison
NZ_CP065123.1	See Comparison
NZ_CP120323.1	See Comparison
NZ_CP120319.1	See Comparison
NZ_CP120316.1	See Comparison
NZ_CP124523.1	See Comparison
NZ_CP140791.1	See Comparison
NZ_CP140780.1	See Comparison
NZ_CP133566.1	See Comparison
NZ_CP133430.1	See Comparison
NZ_CP133427.1	See Comparison
NZ_CP133439.1	See Comparison
NZ_CP133433.1	See Comparison
NZ_CP133436.1	See Comparison
NZ_CP126167.1	See Comparison
NZ_HG970000.1	See Comparison
NZ_CP011843.1	See Comparison
NZ_CP011840.1	See Comparison
NZ_CP063291.1	See Comparison
NZ_CP050711.1	See Comparison
NZ_CP050714.1	See Comparison
NZ_CP050718.1	See Comparison
NZ_CP050722.1	See Comparison
NZ_CP050708.1	See Comparison
NZ_CP041972.1	See Comparison
NZ_CP066048.1	See Comparison
NZ_CP063709.1	See Comparison
NZ_CP063701.1	See Comparison
CP092322.1	See Comparison
NZ_CP060523.1	See Comparison
NZ_CP110221.1	See Comparison
NZ_CP104644.1	See Comparison
NZ_MN125607.1	See Comparison
NZ_CP104363.1	See Comparison
NZ_CP104359.1	See Comparison
CP092319.1	See Comparison
CP092331.1	See Comparison
CP092310.1	See Comparison
CP092327.1	See Comparison
CP092308.1	See Comparison
CP092306.1	See Comparison
CP092292.1	See Comparison
NZ_CP075123.1	See Comparison
NZ_CP082917.1	See Comparison
NZ_CP084533.1	See Comparison
NZ_CP075121.1	See Comparison
NZ_CP075119.1	See Comparison
NZ_CP080092.1	See Comparison
CP074315.1	See Comparison
CP074255.1	See Comparison
CP074253.1	See Comparison
NZ_CP074427.1	See Comparison
CP074239.1	See Comparison
NZ_CP007508.1	See Comparison
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NZ_CP020824.1	See Comparison
NZ_CP011943.1	See Comparison
NZ_CP013098.1	See Comparison
KT317613.1	See Comparison
KT317611.1	See Comparison
NZ_CP007529.1	See Comparison
NZ_CP008927.1	See Comparison
NZ_CP043434.1	See Comparison
NC_019120.1	See Comparison
NZ_CP023437.1	See Comparison
NZ_CP040647.1	See Comparison
NZ_CP040645.1	See Comparison
NZ_CP041178.1	See Comparison
CP032850.1	See Comparison
NZ_CP025557.1	See Comparison
NZ_CP033089.1	See Comparison
NZ_CP030796.1	See Comparison
NZ_CP017178.1	See Comparison
NZ_CP026054.1	See Comparison
NZ_CP015525.1	See Comparison
NZ_CP015527.1	See Comparison
NZ_CP018639.1	See Comparison
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NZ_CP018660.1	See Comparison
NZ_CP018650.1	See Comparison
NZ_CP018636.1	See Comparison
NZ_CP022004.1	See Comparison
NZ_CP133566.1	See Comparison
NZ_CP136646.1	See Comparison
NZ_CP133430.1	See Comparison
NZ_CP133427.1	See Comparison
NZ_CP133439.1	See Comparison
NZ_CP133433.1	See Comparison
NZ_CP133436.1	See Comparison
NZ_CP065123.1	See Comparison
NZ_CP126167.1	See Comparison
NZ_CP120323.1	See Comparison
NZ_CP120319.1	See Comparison
NZ_CP120316.1	See Comparison
NZ_CP140791.1	See Comparison
NZ_CP124523.1	See Comparison
NZ_CP140780.1	See Comparison
NZ_KT317612.1	See Comparison
NZ_HG970000.1	See Comparison
NZ_CP011843.1	See Comparison
NZ_CP050711.1	See Comparison
NZ_CP050714.1	See Comparison
NZ_CP050718.1	See Comparison
NZ_CP050722.1	See Comparison
NZ_CP011840.1	See Comparison
NZ_CP050708.1	See Comparison
NZ_CP060523.1	See Comparison
NZ_CP041972.1	See Comparison
NZ_CP066048.1	See Comparison
NZ_CP063709.1	See Comparison
NZ_CP063701.1	See Comparison
NZ_CP063291.1	See Comparison
NZ_CP110221.1	See Comparison
NZ_MN125607.1	See Comparison
CP092322.1	See Comparison
NZ_CP104644.1	See Comparison
CP092310.1	See Comparison
CP092327.1	See Comparison
CP092308.1	See Comparison
CP092306.1	See Comparison
NZ_CP104363.1	See Comparison
NZ_CP104359.1	See Comparison
CP092319.1	See Comparison
CP092331.1	See Comparison
NZ_CP082917.1	See Comparison
CP092292.1	See Comparison
NZ_CP084533.1	See Comparison
NZ_CP013098.1	See Comparison
NZ_CP074427.1	See Comparison
NZ_CP020826.1	See Comparison
NZ_CP020824.1	See Comparison
NZ_CP011943.1	See Comparison
NZ_CP075123.1	See Comparison
NZ_CP075121.1	See Comparison
NZ_CP075119.1	See Comparison
NZ_CP080092.1	See Comparison
CP074315.1	See Comparison
CP074255.1	See Comparison
CP074253.1	See Comparison
CP074239.1	See Comparison
NZ_CP043434.1	See Comparison
KT317613.1	See Comparison
KT317611.1	See Comparison
NZ_CP007508.1	See Comparison
NZ_CP008927.1	See Comparison
NZ_CP007529.1	See Comparison
NC_019120.1	See Comparison
CP032850.1	See Comparison
NZ_CP040647.1	See Comparison
NZ_CP040645.1	See Comparison
NZ_CP041178.1	See Comparison
NZ_CP015525.1	See Comparison
NZ_CP023437.1	See Comparison
NZ_CP025557.1	See Comparison
NZ_CP033089.1	See Comparison
NZ_CP030796.1	See Comparison
NZ_CP026054.1	See Comparison
NZ_CP015527.1	See Comparison
NZ_CP018639.1	See Comparison
NZ_CP022004.1	See Comparison
NZ_CP018641.1	See Comparison
NZ_CP018660.1	See Comparison
NZ_CP018650.1	See Comparison
NZ_CP018636.1	See Comparison
NZ_CP017178.1	See Comparison
NZ_CP124523.1	See Comparison
NZ_CP136646.1	See Comparison
NZ_CP133566.1	See Comparison
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NZ_CP133427.1	See Comparison
NZ_CP133439.1	See Comparison
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NZ_CP120323.1	See Comparison
NZ_CP120319.1	See Comparison
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NZ_CP140780.1	See Comparison
NZ_CP011843.1	See Comparison
NZ_CP011840.1	See Comparison
NZ_CP066048.1	See Comparison
NZ_CP050711.1	See Comparison
NZ_CP050714.1	See Comparison
NZ_CP050718.1	See Comparison
NZ_CP050722.1	See Comparison
NZ_CP050708.1	See Comparison
NZ_CP041972.1	See Comparison
NZ_CP063709.1	See Comparison
NZ_CP063701.1	See Comparison
NZ_CP060523.1	See Comparison
NZ_CP063291.1	See Comparison
NZ_CP110221.1	See Comparison
NZ_MN125607.1	See Comparison
CP092322.1	See Comparison
NZ_CP104644.1	See Comparison
NZ_CP104363.1	See Comparison
NZ_CP104359.1	See Comparison
CP092310.1	See Comparison
CP092327.1	See Comparison
CP092308.1	See Comparison
CP092306.1	See Comparison
CP092292.1	See Comparison
CP092319.1	See Comparison
CP092331.1	See Comparison
NZ_CP082917.1	See Comparison
NZ_CP084533.1	See Comparison
NZ_CP075123.1	See Comparison
NZ_CP075121.1	See Comparison
NZ_CP075119.1	See Comparison
NZ_CP080092.1	See Comparison
CP074255.1	See Comparison
NZ_CP074427.1	See Comparison
CP074253.1	See Comparison
CP074239.1	See Comparison
NZ_CP013098.1	See Comparison
NZ_CP020826.1	See Comparison
NZ_CP020824.1	See Comparison
NZ_CP011943.1	See Comparison
CP074315.1	See Comparison
KT317613.1	See Comparison
KT317611.1	See Comparison
NZ_CP043434.1	See Comparison
NZ_CP007508.1	See Comparison
NZ_CP008927.1	See Comparison
NZ_CP007529.1	See Comparison
NC_019120.1	See Comparison
NZ_CP023437.1	See Comparison
NZ_CP040647.1	See Comparison
NZ_CP040645.1	See Comparison
NZ_CP041178.1	See Comparison
NZ_CP025557.1	See Comparison
NZ_CP033089.1	See Comparison
CP032850.1	See Comparison
NZ_CP030796.1	See Comparison
NZ_CP017178.1	See Comparison
NZ_CP026054.1	See Comparison
NZ_CP015525.1	See Comparison
NZ_CP015527.1	See Comparison
NZ_CP022004.1	See Comparison
NZ_CP018639.1	See Comparison
NZ_CP018641.1	See Comparison
NZ_CP018660.1	See Comparison
NZ_CP018650.1	See Comparison
NZ_CP018636.1	See Comparison
NZ_CP124523.1	See Comparison
NZ_CP126167.1	See Comparison
NZ_CP136646.1	See Comparison
NZ_CP133566.1	See Comparison
NZ_CP133430.1	See Comparison
NZ_CP133427.1	See Comparison
NZ_CP133439.1	See Comparison
NZ_CP133433.1	See Comparison
NZ_CP133436.1	See Comparison
NZ_CP065123.1	See Comparison
NZ_CP120323.1	See Comparison
NZ_CP120319.1	See Comparison
NZ_CP120316.1	See Comparison
NZ_CP050711.1	See Comparison
NZ_CP140791.1	See Comparison
NZ_CP140780.1	See Comparison
NZ_HG970000.1	See Comparison
NZ_KT317612.1	See Comparison
NZ_CP011843.1	See Comparison
NZ_CP011840.1	See Comparison
NZ_CP050714.1	See Comparison
NZ_CP050718.1	See Comparison
NZ_CP050722.1	See Comparison
NZ_CP050708.1	See Comparison
NZ_CP041972.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore