Plasmid CP092308.1

Sequence

Nucleotide Information

Accession CP092308.1
Description Salmonella enterica strain PNUSAS037276 plasmid PNUSAS037276_1, complete sequence
Source insd
Topology circular
Length 59366 bp
GC Content 0.52 %
Created at NCBI Feb. 15, 2022



Assembly

Genome Data Information

Accession GCA_007567795.2
Assembly Coverage 49


Biosample

Curated Collection Information

Accession 8885897

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA
Original Query Type name
Coordinates (Lat/Lon) 39.78/-100.45
Address USA

ECOSYSTEM
Original Query None
Classification None
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization


Plasmids from same Biosample



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based on Mash distance

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NZ_CP025557.1 See Comparison
NZ_CP030796.1 See Comparison
NZ_CP040647.1 See Comparison
NZ_CP040645.1 See Comparison
NZ_CP026714.1 See Comparison
NZ_CP033089.1 See Comparison
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NZ_CP025553.1 See Comparison
NZ_CP015525.1 See Comparison
NZ_CP026054.1 See Comparison
NZ_CP015527.1 See Comparison
NZ_CP018653.1 See Comparison
NZ_CP018639.1 See Comparison
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NZ_CP018663.1 See Comparison
NZ_CP018660.1 See Comparison
NZ_CP018636.1 See Comparison
NZ_CP018650.1 See Comparison
NZ_CP136646.1 See Comparison
NZ_CP022004.1 See Comparison
NZ_CP017178.1 See Comparison
NZ_CP133436.1 See Comparison
NZ_CP133566.1 See Comparison
NZ_CP133430.1 See Comparison
NZ_CP133427.1 See Comparison
NZ_CP133439.1 See Comparison
NZ_CP133433.1 See Comparison
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Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore