Plasmid NZ_CP065168.1

Sequence

Nucleotide Information

Accession NZ_CP065168.1
Description Klebsiella pneumoniae strain KPN114 plasmid unnamed1, complete sequence
Source refseq
Topology circular
Length 236645 bp
GC Content 0.52 %
Created at NCBI Nov. 29, 2020



Assembly

Genome Data Information

Accession GCF_015694085.1
Assembly Coverage 141


Biosample

Curated Collection Information
Accession 16685806

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 37.8136S;144.9631E
Original Query Type coordinates
Coordinates (Lat/Lon) -37.81/144.96
Address 260, Elizabeth Street, East End Theatre District, Melbourne, City of Melbourne, Victoria, 3000, Australia

ECOSYSTEM
Original Query Homo sapiens,urine
Classification host_associated,urinary_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query urinary tract infection
DOID/SYMP
  • Urinary tract infection (DOID:0080784 )
    • An urinary system disease that is characterized by an infection in any part of the urinary system, including the kidneys, ureters, bladder or urethra.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP110610.1 See Comparison
CP110586.1 See Comparison
CP067952.1 See Comparison
CP067661.1 See Comparison
NZ_CP089384.1 See Comparison
NZ_CP129791.1 See Comparison
CP024516.1 See Comparison
CP024508.1 See Comparison
CP024500.1 See Comparison
CP024483.1 See Comparison
NZ_CP129800.1 See Comparison
NZ_LR890416.1 See Comparison
CP052441.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890572.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_CP065164.1 See Comparison
CP110610.1 See Comparison
LR890401.1 See Comparison
CP110586.1 See Comparison
CP024516.1 See Comparison
CP067952.1 See Comparison
CP067661.1 See Comparison
NZ_CP089384.1 See Comparison
CP024508.1 See Comparison
CP024500.1 See Comparison
CP024483.1 See Comparison
CP052441.1 See Comparison
NZ_CP129791.1 See Comparison
NZ_CP129800.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890572.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
CP067952.1 See Comparison
LR890401.1 See Comparison
NZ_CP065164.1 See Comparison
CP110610.1 See Comparison
CP110586.1 See Comparison
NZ_CP065164.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890485.1 See Comparison
CP067661.1 See Comparison
NZ_CP089384.1 See Comparison
CP024516.1 See Comparison
CP024508.1 See Comparison
CP024500.1 See Comparison
CP024483.1 See Comparison
NZ_CP129791.1 See Comparison
NZ_CP129800.1 See Comparison
CP052441.1 See Comparison
NZ_LR890572.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890385.1 See Comparison
CP110610.1 See Comparison
LR890401.1 See Comparison
CP110586.1 See Comparison
NZ_LR890572.1 See Comparison
CP067661.1 See Comparison
NZ_CP089384.1 See Comparison
CP024516.1 See Comparison
CP024508.1 See Comparison
CP024500.1 See Comparison
CP067952.1 See Comparison
CP024483.1 See Comparison
NZ_CP129791.1 See Comparison
NZ_CP129800.1 See Comparison
CP052441.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_CP065164.1 See Comparison
LR890401.1 See Comparison
CP024516.1 See Comparison
CP067952.1 See Comparison
CP067661.1 See Comparison
NZ_CP089384.1 See Comparison
CP110610.1 See Comparison
CP110586.1 See Comparison
CP024508.1 See Comparison
CP024500.1 See Comparison
CP024483.1 See Comparison
NZ_CP129791.1 See Comparison
NZ_CP129800.1 See Comparison
CP052441.1 See Comparison
CP110610.1 See Comparison
LR890401.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890572.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_CP065164.1 See Comparison
CP110586.1 See Comparison
CP067661.1 See Comparison
CP067952.1 See Comparison
CP024516.1 See Comparison
NZ_CP089384.1 See Comparison
CP024508.1 See Comparison
CP024500.1 See Comparison
CP024483.1 See Comparison
NZ_CP129791.1 See Comparison
NZ_CP129800.1 See Comparison
CP052441.1 See Comparison
LR890401.1 See Comparison
NZ_LR890416.1 See Comparison
NZ_LR890485.1 See Comparison
NZ_LR890572.1 See Comparison
NZ_LR890680.1 See Comparison
NZ_LR890191.1 See Comparison
NZ_LR890205.1 See Comparison
NZ_LR890392.1 See Comparison
NZ_LR890231.1 See Comparison
NZ_LR890375.1 See Comparison
NZ_LR890344.1 See Comparison
NZ_LR890385.1 See Comparison
NZ_CP065168.1 See Comparison
NZ_CP065164.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore