Plasmid NZ_OY899164.1

Sequence

Nucleotide Information

Accession NZ_OY899164.1
Description Klebsiella pneumoniae strain KP31612023BGR isolate KP31612023 plasmid P_KP31612023_5, complete sequence
Source refseq
Topology circular
Length 6141 bp
GC Content 0.52 %
Created at NCBI Dec. 7, 2023



Assembly

Genome Data Information

Accession GCF_963694945.1
Assembly Coverage 142


Biosample

Curated Collection Information

Accession 38661562

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 43.225887N;27.936721E
Original Query Type coordinates
Coordinates (Lat/Lon) 43.23/27.94
Address МБАЛ Света Марина, Georgi Kitov str., м-т Сотира, Приморски, Varna, 9005, Bulgaria

ECOSYSTEM
Original Query Homo sapiens,human abdominal fluid
Classification abdominal,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
  • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization




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based on Mash distance

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NZ_CP137409.1 See Comparison
NZ_CP135483.1 See Comparison
NZ_CP101121.1 See Comparison
NZ_CP132644.1 See Comparison
NZ_CP122385.1 See Comparison
NZ_MF774791.1 See Comparison
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NZ_CP146149.1 See Comparison
NZ_CP146189.1 See Comparison
NZ_CP146164.1 See Comparison
NZ_CP146154.1 See Comparison
NZ_CP146179.1 See Comparison
NZ_CP146169.1 See Comparison
NZ_CP146184.1 See Comparison
NZ_CP146159.1 See Comparison
NZ_CP146174.1 See Comparison
NZ_CP127510.1 See Comparison
NZ_CP127513.1 See Comparison
NZ_CP127517.1 See Comparison
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NZ_CP141573.1 See Comparison
NZ_CP140296.1 See Comparison
NZ_OY978238.1 See Comparison
NZ_OY978496.1 See Comparison
NZ_CP050165.1 See Comparison
NZ_LC507653.1 See Comparison
NZ_CP095560.1 See Comparison
NZ_OY856406.1 See Comparison
NZ_KY454616.1 See Comparison
LC613148.1 See Comparison
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NZ_CP070448.1 See Comparison
NZ_CP070418.1 See Comparison
NZ_CP070452.1 See Comparison
NZ_CP070428.1 See Comparison
NZ_CP070433.1 See Comparison
NZ_MT312220.1 See Comparison
NZ_CP070461.1 See Comparison
NZ_CP070413.1 See Comparison
NZ_CP068952.1 See Comparison
NZ_CP068892.1 See Comparison
NZ_CP068856.1 See Comparison
NZ_CP068860.1 See Comparison
NZ_CP068930.1 See Comparison
NZ_CP068883.1 See Comparison
NZ_CP068858.1 See Comparison
NZ_CP068846.1 See Comparison
NZ_CP068853.1 See Comparison
NZ_CP068946.1 See Comparison
NZ_CP068875.1 See Comparison
NZ_CP068839.1 See Comparison
NZ_CP068311.1 See Comparison
NZ_CP068306.1 See Comparison
NZ_CP068334.1 See Comparison
NZ_CP061054.1 See Comparison
NZ_CP092341.1 See Comparison
NZ_CP061063.1 See Comparison
NZ_CP097391.1 See Comparison
NZ_CP096175.1 See Comparison
NZ_CP096182.1 See Comparison
NZ_CP097241.1 See Comparison
NZ_CP083935.1 See Comparison
NZ_CP102991.1 See Comparison
NZ_CP101881.1 See Comparison
NZ_CP095575.1 See Comparison
NZ_CP095581.1 See Comparison
NZ_CP095657.1 See Comparison
NZ_CP006802.1 See Comparison
NZ_CP091603.1 See Comparison
NZ_CP083046.1 See Comparison
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NZ_CP079183.1 See Comparison
NZ_CP079168.1 See Comparison
NZ_CP079153.1 See Comparison
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NZ_CP079190.1 See Comparison
NZ_CP079148.1 See Comparison
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NZ_CP033950.1 See Comparison
CP033682.1 See Comparison
CP031737.1 See Comparison
NZ_CP024042.1 See Comparison
CM009032.1 See Comparison
NZ_CP132644.1 See Comparison
NZ_CP135510.1 See Comparison
NZ_CP135483.1 See Comparison
NZ_CP101121.1 See Comparison
NZ_CP095560.1 See Comparison
NZ_CP122385.1 See Comparison
NZ_CP146149.1 See Comparison
NZ_CP146196.1 See Comparison
NZ_CP146164.1 See Comparison
NZ_CP146169.1 See Comparison
NZ_CP146189.1 See Comparison
NZ_CP146154.1 See Comparison
NZ_CP146179.1 See Comparison
NZ_CP146159.1 See Comparison
NZ_CP146174.1 See Comparison
NZ_CP146184.1 See Comparison


Identical Plasmids

100% Sequence Identity



Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore