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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP016920.1
Sequence
Nucleotide Information
Accession
NZ_CP016920.1
Description
Klebsiella pneumoniae isolate 11 plasmid pColKP3_DHQP1300920, complete sequence
Source
refseq
Topology
circular
Length
6139 bp
GC Content
0.52 %
Created at NCBI
Aug. 26, 2016
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Assembly
Genome Data Information
Accession
GCF_001709275.1
Assembly Coverage
139
Biosample
Curated Collection Information
Accession
4448229
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
USA,Pennsylvania
Original Query Type
name
Coordinates (Lat/Lon)
40.97/-77.73
Address
USA,Pennsylvania
ECOSYSTEM
Original Query
Homo sapiens,urine
Classification
host_associated,urinary_system
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
NZ_CP016922.1
NZ_CP016921.1
NZ_CP016919.1
Similar Plasmids
based on Mash distance
NZ_CP050165.1
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NZ_LC507653.1
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NZ_MF774791.1
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NZ_KY454616.1
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NZ_CP045680.1
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NZ_CP070413.1
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NZ_CP070448.1
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NZ_CP068856.1
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NZ_CP068860.1
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NZ_CP068930.1
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NZ_CP068883.1
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NZ_CP068858.1
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NZ_CP068846.1
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NZ_CP068853.1
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NZ_CP068946.1
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NZ_CP068875.1
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NZ_CP068839.1
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NZ_CP068311.1
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NZ_CP068306.1
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NZ_CP068334.1
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NZ_CP061054.1
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NZ_CP061063.1
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NZ_CP102991.1
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NZ_CP097391.1
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NZ_CP101881.1
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NZ_CP096175.1
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NZ_CP096182.1
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CP016038.1
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NZ_CP083935.1
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NZ_CP097241.1
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NZ_CP095575.1
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NZ_CP095581.1
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NZ_CP095657.1
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CP067714.1
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NZ_CP092341.1
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NZ_CP083046.1
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NZ_CP079730.1
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NZ_CP079640.1
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NZ_CP079603.1
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NZ_CP079686.1
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NZ_CP079611.1
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NZ_CP079678.1
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NZ_CP079671.1
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NZ_CP091603.1
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NZ_CP090472.1
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NZ_CP083059.1
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NZ_CP083050.1
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NZ_CP084047.1
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NZ_CP078037.1
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NZ_CP079160.1
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NZ_CP079183.1
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NZ_CP079168.1
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NZ_CP079153.1
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NZ_CP079128.1
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NZ_CP079142.1
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NZ_CP079190.1
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NZ_CP079148.1
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LC521850.1
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NZ_CP072406.1
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NZ_CP072416.1
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NZ_CP072411.1
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NZ_CP012562.1
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CP031737.1
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NZ_CP012755.1
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NZ_CP006802.1
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NZ_CP036323.1
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NZ_CP036197.1
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NZ_CP034762.1
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NZ_CP033950.1
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CP033682.1
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NZ_CP024042.1
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CM009032.1
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NZ_CP137419.1
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NZ_CP137409.1
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NZ_CP135510.1
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NZ_CP135483.1
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NZ_CP101121.1
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NZ_CP095560.1
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NZ_CP122385.1
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NZ_CP141573.1
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NZ_CP146164.1
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NZ_CP146169.1
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NZ_CP146184.1
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NZ_CP146159.1
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NZ_CP146174.1
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NZ_CP127510.1
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NZ_CP127513.1
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NZ_CP127517.1
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NZ_CP141552.1
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NZ_LC507653.1
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NZ_MF774791.1
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NZ_CP068930.1
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NZ_CP102991.1
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NZ_CP097391.1
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NZ_CP101881.1
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NZ_CP095575.1
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NZ_CP095581.1
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NZ_CP095657.1
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NZ_CP091603.1
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NZ_CP090472.1
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NZ_CP083059.1
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NZ_CP083050.1
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NZ_CP084047.1
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NZ_CP079730.1
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NZ_CP079640.1
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NZ_CP079603.1
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NZ_CP079686.1
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NZ_CP079611.1
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NZ_CP079678.1
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NZ_CP079671.1
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NZ_CP078037.1
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NZ_CP083935.1
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NZ_CP096175.1
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NZ_CP096182.1
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NZ_CP097241.1
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NZ_CP092341.1
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NZ_CP083046.1
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NZ_CP079160.1
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CP033682.1
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NZ_CP146189.1
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NZ_CP146164.1
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NZ_CP146154.1
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NZ_CP146179.1
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NZ_CP146169.1
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NZ_CP146184.1
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NZ_CP146159.1
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NZ_CP146174.1
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NZ_CP127510.1
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NZ_CP127513.1
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NZ_CP127517.1
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NZ_CP141573.1
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NZ_CP132644.1
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NZ_CP095560.1
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NZ_OY978238.1
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NZ_OY978496.1
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NZ_OY899164.1
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NZ_OY856406.1
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NZ_CP050165.1
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NZ_MF774791.1
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NZ_LC507653.1
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NZ_KY454616.1
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NZ_CP068875.1
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NZ_CP045680.1
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LC613148.1
See Comparison
NZ_CP070461.1
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NZ_CP070413.1
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NZ_CP070448.1
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NZ_CP070418.1
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NZ_CP070452.1
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NZ_CP070428.1
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NZ_CP070433.1
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NZ_CP068952.1
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NZ_CP068892.1
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NZ_CP068856.1
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NZ_CP068860.1
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NZ_CP068930.1
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NZ_CP068883.1
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NZ_CP068858.1
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NZ_CP068846.1
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NZ_CP068853.1
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NZ_CP068839.1
See Comparison
NZ_CP083935.1
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NZ_CP068946.1
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NZ_CP068311.1
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NZ_CP068306.1
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NZ_CP068334.1
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NZ_CP061054.1
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NZ_CP061063.1
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NZ_CP096175.1
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NZ_CP102991.1
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NZ_CP097391.1
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NZ_CP101881.1
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NZ_CP096182.1
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NZ_CP097241.1
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NZ_CP095575.1
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NZ_CP095581.1
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NZ_CP095657.1
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NZ_CP092341.1
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CP067714.1
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NZ_CP091603.1
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NZ_CP083059.1
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NZ_CP090472.1
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NZ_CP083050.1
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NZ_CP083046.1
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CP016038.1
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NZ_CP079183.1
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NZ_CP079168.1
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NZ_CP079153.1
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NZ_CP079128.1
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NZ_CP079142.1
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NZ_CP079190.1
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NZ_CP079148.1
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NZ_CP072406.1
See Comparison
NZ_CP072416.1
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NZ_CP072411.1
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NZ_CP012562.1
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NZ_CP084047.1
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NZ_CP079730.1
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NZ_CP079640.1
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NZ_CP079603.1
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NZ_CP079686.1
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NZ_CP079611.1
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NZ_CP079678.1
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NZ_CP079671.1
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LC521850.1
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NZ_CP006802.1
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NZ_CP012755.1
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NZ_CP033950.1
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NZ_CP034762.1
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NZ_CP036323.1
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NZ_CP036197.1
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CP033682.1
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NZ_CP024042.1
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CP031737.1
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CM009032.1
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NZ_CP137419.1
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NZ_CP122385.1
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NZ_CP135510.1
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NZ_CP135483.1
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NZ_CP132644.1
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NZ_CP101121.1
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NZ_CP146154.1
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NZ_CP095560.1
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NZ_CP146179.1
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NZ_CP146169.1
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NZ_CP146184.1
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NZ_CP146159.1
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NZ_CP146174.1
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NZ_LC507653.1
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NZ_CP146196.1
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NZ_CP146149.1
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NZ_CP146189.1
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NZ_CP146164.1
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NZ_CP140296.1
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NZ_OY978238.1
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NZ_OY978496.1
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NZ_CP050165.1
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NZ_CP127510.1
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NZ_CP127513.1
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NZ_CP127517.1
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NZ_CP141552.1
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NZ_CP141573.1
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NZ_OY899164.1
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NZ_OY856406.1
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LC613148.1
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NZ_MF774791.1
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NZ_KY454616.1
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NZ_CP045680.1
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NZ_CP070461.1
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NZ_CP070413.1
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NZ_CP070448.1
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NZ_CP070418.1
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NZ_CP070452.1
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NZ_CP070428.1
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NZ_CP070433.1
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NZ_CP068952.1
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NZ_CP068946.1
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NZ_CP068892.1
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NZ_CP068856.1
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NZ_CP068860.1
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NZ_CP068930.1
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NZ_CP068883.1
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NZ_CP068858.1
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NZ_CP068846.1
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NZ_CP068853.1
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NZ_CP068875.1
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NZ_CP068839.1
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NZ_CP083935.1
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NZ_CP068311.1
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NZ_CP068306.1
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NZ_CP068334.1
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NZ_CP061054.1
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NZ_CP061063.1
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NZ_CP102991.1
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NZ_CP096175.1
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NZ_CP096182.1
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NZ_CP083046.1
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NZ_CP091603.1
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NZ_CP090472.1
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NZ_CP084047.1
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NZ_CP083059.1
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NZ_CP083050.1
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NZ_CP072416.1
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NZ_CP079730.1
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NZ_CP079640.1
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NZ_CP079603.1
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NZ_CP079686.1
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NZ_CP079611.1
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NZ_CP079678.1
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NZ_CP079671.1
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NZ_CP078037.1
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NZ_CP079160.1
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NZ_CP079183.1
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NZ_CP079168.1
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NZ_CP079153.1
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NZ_CP079128.1
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NZ_CP079142.1
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NZ_CP079190.1
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NZ_CP079148.1
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NZ_CP072411.1
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NZ_CP012562.1
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LC521850.1
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NZ_CP072406.1
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NZ_CP006802.1
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NZ_CP016920.1
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CP016038.1
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NZ_CP012755.1
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NZ_CP034762.1
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NZ_CP036323.1
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NZ_CP036197.1
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CP033682.1
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CP031737.1
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NZ_CP033950.1
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NZ_CP024042.1
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NZ_CP137419.1
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CM009032.1
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NZ_CP137409.1
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NZ_CP135510.1
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NZ_CP135483.1
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NZ_CP101121.1
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NZ_CP132644.1
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NZ_CP095560.1
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NZ_CP122385.1
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NZ_CP146196.1
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NZ_CP146149.1
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NZ_CP146179.1
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NZ_CP146169.1
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NZ_CP146184.1
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NZ_CP146159.1
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NZ_CP146189.1
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NZ_CP146164.1
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NZ_CP146154.1
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NZ_CP127510.1
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NZ_CP146174.1
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NZ_CP127513.1
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NZ_CP127517.1
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NZ_OY899164.1
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NZ_CP141552.1
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NZ_CP141573.1
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NZ_OY856406.1
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NZ_LC507653.1
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NZ_CP140296.1
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NZ_OY978238.1
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NZ_OY978496.1
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NZ_CP050165.1
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NZ_KY454616.1
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NZ_MF774791.1
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NZ_CP045680.1
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LC613148.1
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NZ_CP070461.1
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NZ_CP070448.1
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NZ_CP070418.1
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NZ_CP070452.1
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NZ_CP070428.1
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NZ_CP070413.1
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NZ_CP068952.1
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NZ_CP070433.1
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NZ_CP068892.1
See Comparison
NZ_CP068856.1
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NZ_CP068860.1
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NZ_CP068930.1
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NZ_CP068883.1
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NZ_CP068858.1
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NZ_CP068846.1
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NZ_CP068853.1
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NZ_CP068946.1
See Comparison
NZ_CP068875.1
See Comparison
NZ_CP068839.1
See Comparison
NZ_CP068311.1
See Comparison
NZ_CP068306.1
See Comparison
NZ_CP068334.1
See Comparison
NZ_CP102991.1
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NZ_CP061054.1
See Comparison
NZ_CP061063.1
See Comparison
NZ_CP083935.1
See Comparison
NZ_CP096175.1
See Comparison
NZ_CP101881.1
See Comparison
NZ_CP097391.1
See Comparison
NZ_CP096182.1
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NZ_CP091603.1
See Comparison
NZ_CP097241.1
See Comparison
CP067714.1
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NZ_CP092341.1
See Comparison
NZ_CP095575.1
See Comparison
NZ_CP095581.1
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NZ_CP095657.1
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NZ_CP083059.1
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NZ_CP090472.1
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NZ_CP083046.1
See Comparison
NZ_CP083050.1
See Comparison
NZ_CP079730.1
See Comparison
NZ_CP079678.1
See Comparison
NZ_CP084047.1
See Comparison
NZ_CP079640.1
See Comparison
NZ_CP079671.1
See Comparison
NZ_CP079603.1
See Comparison
NZ_CP079686.1
See Comparison
NZ_CP079611.1
See Comparison
CP016038.1
See Comparison
NZ_CP078037.1
See Comparison
NZ_CP079160.1
See Comparison
NZ_CP079183.1
See Comparison
NZ_CP079168.1
See Comparison
NZ_CP079153.1
See Comparison
NZ_CP079128.1
See Comparison
NZ_CP079142.1
See Comparison
NZ_CP079190.1
See Comparison
NZ_CP079148.1
See Comparison
LC521850.1
See Comparison
NZ_CP072406.1
See Comparison
NZ_CP072416.1
See Comparison
NZ_CP072411.1
See Comparison
CM009032.1
See Comparison
NZ_CP012562.1
See Comparison
NZ_CP012755.1
See Comparison
NZ_CP036323.1
See Comparison
NZ_CP034762.1
See Comparison
NZ_CP024042.1
See Comparison
NZ_CP006802.1
See Comparison
NZ_CP036197.1
See Comparison
NZ_CP033950.1
See Comparison
CP033682.1
See Comparison
CP031737.1
See Comparison
NZ_CP122385.1
See Comparison
NZ_CP137419.1
See Comparison
NZ_CP137409.1
See Comparison
NZ_CP135510.1
See Comparison
NZ_CP135483.1
See Comparison
NZ_CP101121.1
See Comparison
NZ_CP132644.1
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NZ_CP146196.1
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NZ_CP095560.1
See Comparison
NZ_CP146184.1
See Comparison
NZ_CP146159.1
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NZ_CP146174.1
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NZ_CP146149.1
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NZ_CP146189.1
See Comparison
NZ_CP146164.1
See Comparison
NZ_CP146154.1
See Comparison
NZ_CP146179.1
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NZ_CP146169.1
See Comparison
NZ_CP127510.1
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NZ_CP127513.1
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NZ_CP127517.1
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NZ_OY899164.1
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NZ_CP141552.1
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NZ_CP141573.1
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NZ_CP140296.1
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NZ_OY978238.1
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NZ_OY978496.1
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NZ_OY856406.1
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NZ_KY454616.1
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NZ_CP050165.1
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NZ_LC507653.1
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NZ_MF774791.1
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NZ_CP045680.1
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LC613148.1
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NZ_CP070461.1
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NZ_CP070418.1
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NZ_CP070452.1
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NZ_CP070428.1
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NZ_CP070413.1
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NZ_CP070448.1
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NZ_CP068952.1
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NZ_CP070433.1
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NZ_CP068892.1
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NZ_CP068856.1
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NZ_CP068860.1
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NZ_CP068930.1
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NZ_CP068883.1
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NZ_CP068858.1
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NZ_CP068846.1
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NZ_CP068853.1
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NZ_CP068946.1
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NZ_CP068875.1
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NZ_CP068839.1
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NZ_CP068306.1
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NZ_CP068334.1
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NZ_CP061054.1
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NZ_CP068311.1
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NZ_CP101881.1
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NZ_CP083935.1
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NZ_CP102991.1
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NZ_CP097391.1
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NZ_CP096175.1
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NZ_CP096182.1
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NZ_CP061063.1
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NZ_CP092341.1
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NZ_CP127513.1
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NZ_CP141552.1
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NZ_CP127517.1
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NZ_CP141573.1
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NZ_CP140296.1
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NZ_OY978496.1
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NZ_OY899164.1
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NZ_OY978238.1
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NZ_OY856406.1
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Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore