Plasmid NZ_OY899165.1

Sequence

Nucleotide Information

Accession NZ_OY899165.1
Description Klebsiella pneumoniae strain KP31612023BGR isolate KP31612023 plasmid P_KP31612023_6, complete sequence
Source refseq
Topology circular
Length 6720 bp
GC Content 0.44 %
Created at NCBI Dec. 7, 2023



Assembly

Genome Data Information

Accession GCF_963694945.1
Assembly Coverage 142


Biosample

Curated Collection Information
Accession 38661562

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 43.225887N;27.936721E
Original Query Type coordinates
Coordinates (Lat/Lon) 43.23/27.94
Address МБАЛ Света Марина, Georgi Kitov str., м-т Сотира, Приморски, Varna, 9005, Bulgaria

ECOSYSTEM
Original Query Homo sapiens,human abdominal fluid
Classification abdominal,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_OY899165.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore