Plasmid NZ_MT312220.1

Sequence

Nucleotide Information

Accession NZ_MT312220.1
Description Escherichia coli isolate E566 plasmid pE566-OXA-232, complete sequence
Source refseq
Topology circular
Length 6027 bp
GC Content 0.52 %
Created at NCBI Aug. 4, 2020





Similar Plasmids

based on Mash distance

NZ_CP137419.1 See Comparison
NZ_CP135483.1 See Comparison
NZ_CP101121.1 See Comparison
NZ_CP132644.1 See Comparison
NZ_CP127510.1 See Comparison
NZ_CP127517.1 See Comparison
NZ_CP141552.1 See Comparison
NZ_OY978238.1 See Comparison
NZ_OY978496.1 See Comparison
NZ_OY899164.1 See Comparison
NZ_OY856406.1 See Comparison
NZ_KY454616.1 See Comparison
NZ_CP068846.1 See Comparison
NZ_CP068946.1 See Comparison
NZ_CP090472.1 See Comparison
NZ_CP092341.1 See Comparison
NZ_MT312220.1 See Comparison
NZ_CP096182.1 See Comparison
NZ_CP095581.1 See Comparison
NZ_CP095657.1 See Comparison
NZ_CP079730.1 See Comparison
NZ_CP012562.1 See Comparison
NZ_CP079128.1 See Comparison
NZ_CP034762.1 See Comparison
NZ_CP101121.1 See Comparison
CP033682.1 See Comparison
NZ_CP135483.1 See Comparison
NZ_CP137419.1 See Comparison
NZ_KY454616.1 See Comparison
NZ_CP127510.1 See Comparison
NZ_CP127517.1 See Comparison
NZ_CP132644.1 See Comparison
NZ_CP141552.1 See Comparison
NZ_OY978238.1 See Comparison
NZ_OY978496.1 See Comparison
NZ_OY899164.1 See Comparison
NZ_OY856406.1 See Comparison
NZ_CP068946.1 See Comparison
NZ_CP068846.1 See Comparison
NZ_CP095581.1 See Comparison
NZ_CP096182.1 See Comparison
NZ_CP095657.1 See Comparison
NZ_CP090472.1 See Comparison
NZ_CP092341.1 See Comparison
NZ_CP079730.1 See Comparison
NZ_CP012562.1 See Comparison
NZ_CP079128.1 See Comparison
NZ_CP137419.1 See Comparison
NZ_CP034762.1 See Comparison
CP033682.1 See Comparison
NZ_CP101121.1 See Comparison
NZ_CP135483.1 See Comparison
NZ_CP127510.1 See Comparison
NZ_CP132644.1 See Comparison
NZ_CP127517.1 See Comparison
NZ_CP095581.1 See Comparison
NZ_CP068946.1 See Comparison
NZ_CP096182.1 See Comparison
NZ_CP141552.1 See Comparison
NZ_OY978238.1 See Comparison
NZ_OY978496.1 See Comparison
NZ_OY899164.1 See Comparison
NZ_OY856406.1 See Comparison
NZ_KY454616.1 See Comparison
NZ_CP068846.1 See Comparison
NZ_CP095657.1 See Comparison
NZ_CP079730.1 See Comparison
NZ_CP092341.1 See Comparison
NZ_CP090472.1 See Comparison
NZ_CP034762.1 See Comparison
NZ_CP079128.1 See Comparison
NZ_CP012562.1 See Comparison
NZ_CP137419.1 See Comparison
CP033682.1 See Comparison
NZ_OY978238.1 See Comparison
NZ_CP101121.1 See Comparison
NZ_CP127510.1 See Comparison
NZ_CP127517.1 See Comparison
NZ_CP135483.1 See Comparison
NZ_CP132644.1 See Comparison
NZ_CP141552.1 See Comparison
NZ_OY978496.1 See Comparison
NZ_OY899164.1 See Comparison
NZ_OY856406.1 See Comparison
NZ_CP068946.1 See Comparison
NZ_CP068846.1 See Comparison
NZ_KY454616.1 See Comparison
NZ_CP079128.1 See Comparison
NZ_CP095581.1 See Comparison
NZ_CP095657.1 See Comparison
NZ_CP092341.1 See Comparison
NZ_CP096182.1 See Comparison
NZ_CP090472.1 See Comparison
NZ_CP079730.1 See Comparison
NZ_CP034762.1 See Comparison
NZ_CP012562.1 See Comparison
NZ_CP137419.1 See Comparison
CP033682.1 See Comparison
NZ_CP135483.1 See Comparison
NZ_CP141552.1 See Comparison
NZ_CP101121.1 See Comparison
NZ_CP127510.1 See Comparison
NZ_CP127517.1 See Comparison
NZ_CP132644.1 See Comparison
NZ_OY978238.1 See Comparison
NZ_OY978496.1 See Comparison
NZ_OY899164.1 See Comparison
NZ_OY856406.1 See Comparison
NZ_CP068946.1 See Comparison
NZ_CP068846.1 See Comparison
NZ_KY454616.1 See Comparison
NZ_CP095581.1 See Comparison
NZ_CP096182.1 See Comparison
NZ_CP095657.1 See Comparison
NZ_CP079730.1 See Comparison
NZ_CP092341.1 See Comparison
NZ_CP090472.1 See Comparison
NZ_CP034762.1 See Comparison
NZ_CP079128.1 See Comparison
NZ_CP012562.1 See Comparison
NZ_CP132644.1 See Comparison
NZ_CP137419.1 See Comparison
NZ_CP135483.1 See Comparison
CP033682.1 See Comparison
NZ_CP101121.1 See Comparison
NZ_CP127517.1 See Comparison
NZ_OY899164.1 See Comparison
NZ_CP127510.1 See Comparison
NZ_CP141552.1 See Comparison
NZ_OY856406.1 See Comparison
NZ_CP068846.1 See Comparison
NZ_OY978238.1 See Comparison
NZ_OY978496.1 See Comparison
NZ_KY454616.1 See Comparison
NZ_CP092341.1 See Comparison
NZ_CP068946.1 See Comparison
NZ_CP096182.1 See Comparison
NZ_CP095581.1 See Comparison
NZ_CP095657.1 See Comparison
NZ_CP090472.1 See Comparison
NZ_CP079128.1 See Comparison
NZ_CP079730.1 See Comparison
NZ_CP034762.1 See Comparison
NZ_CP012562.1 See Comparison
NZ_CP137419.1 See Comparison
CP033682.1 See Comparison
NZ_CP135483.1 See Comparison
NZ_CP132644.1 See Comparison
NZ_CP101121.1 See Comparison
NZ_CP127510.1 See Comparison
NZ_CP127517.1 See Comparison
NZ_CP141552.1 See Comparison
NZ_CP068946.1 See Comparison
NZ_OY899164.1 See Comparison
NZ_OY856406.1 See Comparison
NZ_KY454616.1 See Comparison
NZ_OY978238.1 See Comparison
NZ_OY978496.1 See Comparison
NZ_CP068846.1 See Comparison
NZ_CP096182.1 See Comparison
NZ_CP095581.1 See Comparison
NZ_CP095657.1 See Comparison
NZ_CP092341.1 See Comparison
NZ_CP079730.1 See Comparison
NZ_CP090472.1 See Comparison
NZ_CP079128.1 See Comparison
CP033682.1 See Comparison
NZ_CP012562.1 See Comparison
NZ_CP034762.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2