Plasmid NZ_OU015715.1

Sequence

Nucleotide Information

Accession	NZ_OU015715.1
Description	Enterococcus faecium isolate USZ_VRE32_P32 plasmid pl6, complete sequence
Source	refseq
Topology	circular
Length	3221 bp
GC Content	0.34 %
Created at NCBI	May 10, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Enterococcus faecium (1352)

Lineage

Superkingdom	Bacteria (2)
Phylum	Bacillota (1239)
Class	Bacilli (91061)
Order	Lactobacillales (186826)
Family	Enterococcaceae (81852)
Genus	Enterococcus (1350)
Species	Enterococcus_faecium (1352)
Strain

Assembly

Genome Data Information

Accession	GCF_907165365.1
Assembly Coverage	26

Biosample

Curated Collection Information

Accession	19039078

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	47.4N;8.5E
Original Query Type	coordinates
Coordinates (Lat/Lon)	47.40/8.50
Address	25b, Bauherrenstrasse, Höngg, Kreis 10, Zurich, District Zurich, Zurich, 8049, Switzerland

ECOSYSTEM

Original Query	Homo sapiens,Inguinal/Rectal swab
Classification	gastrointestinal_system,host_associated,rectal
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	diseased
DOID/SYMP	Disease (DOID:4 ) A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_KY595965.1	See Comparison
NZ_OP378676.1	See Comparison
NZ_CP018069.1	See Comparison
NZ_CP083926.1	See Comparison
NZ_CP083916.1	See Comparison
NZ_LR135417.1	See Comparison
NZ_CP044280.1	See Comparison
NZ_LR135496.1	See Comparison
NZ_LR135392.1	See Comparison
NZ_LR135412.1	See Comparison
NZ_CP083926.1	See Comparison
NZ_LR135486.1	See Comparison
NZ_LR135441.1	See Comparison
NZ_LR135406.1	See Comparison
NZ_LR135399.1	See Comparison
NZ_KY595965.1	See Comparison
NZ_CP018069.1	See Comparison
NZ_LR135392.1	See Comparison
NZ_LR135412.1	See Comparison
NZ_OP378676.1	See Comparison
NZ_CP083926.1	See Comparison
NZ_CP083916.1	See Comparison
NZ_CP044280.1	See Comparison
NZ_LR135486.1	See Comparison
NZ_LR135441.1	See Comparison
NZ_LR135406.1	See Comparison
NZ_LR135399.1	See Comparison
NZ_LR135417.1	See Comparison
NZ_LR135496.1	See Comparison
NZ_KY595965.1	See Comparison
NZ_OP378676.1	See Comparison
NZ_CP083916.1	See Comparison
NZ_KY595965.1	See Comparison
NZ_CP018069.1	See Comparison
NZ_CP044280.1	See Comparison
NZ_LR135486.1	See Comparison
NZ_LR135441.1	See Comparison
NZ_LR135406.1	See Comparison
NZ_LR135399.1	See Comparison
NZ_LR135417.1	See Comparison
NZ_LR135496.1	See Comparison
NZ_LR135392.1	See Comparison
NZ_LR135412.1	See Comparison
NZ_CP083926.1	See Comparison
NZ_OP378676.1	See Comparison
NZ_CP083916.1	See Comparison
NZ_OU015715.1	See Comparison
NZ_LR135486.1	See Comparison
NZ_CP044280.1	See Comparison
NZ_CP018069.1	See Comparison
NZ_LR135441.1	See Comparison
NZ_LR135406.1	See Comparison
NZ_LR135399.1	See Comparison
NZ_LR135417.1	See Comparison
NZ_LR135496.1	See Comparison
NZ_LR135392.1	See Comparison
NZ_LR135412.1	See Comparison
NZ_CP018069.1	See Comparison
NZ_OP378676.1	See Comparison
NZ_KY595965.1	See Comparison
NZ_CP083926.1	See Comparison
NZ_CP083916.1	See Comparison
NZ_OP378676.1	See Comparison
NZ_CP044280.1	See Comparison
NZ_LR135486.1	See Comparison
NZ_LR135441.1	See Comparison
NZ_LR135406.1	See Comparison
NZ_LR135399.1	See Comparison
NZ_LR135417.1	See Comparison
NZ_LR135496.1	See Comparison
NZ_LR135392.1	See Comparison
NZ_LR135412.1	See Comparison
NZ_KY595965.1	See Comparison
NZ_CP044280.1	See Comparison
NZ_CP018069.1	See Comparison
NZ_CP083926.1	See Comparison
NZ_CP083916.1	See Comparison
NZ_LR135486.1	See Comparison
NZ_LR135441.1	See Comparison
NZ_LR135406.1	See Comparison
NZ_LR135399.1	See Comparison
NZ_LR135417.1	See Comparison
NZ_LR135496.1	See Comparison
NZ_LR135392.1	See Comparison
NZ_LR135412.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore