Plasmid NZ_OU015713.1

Sequence

Nucleotide Information

Accession	NZ_OU015713.1
Description	Enterococcus faecium isolate USZ_VRE32_P32 plasmid pl4, complete sequence
Source	refseq
Topology	circular
Length	4374 bp
GC Content	0.37 %
Created at NCBI	May 10, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Enterococcus faecium (1352)

Lineage

Superkingdom	Bacteria (2)
Phylum	Bacillota (1239)
Class	Bacilli (91061)
Order	Lactobacillales (186826)
Family	Enterococcaceae (81852)
Genus	Enterococcus (1350)
Species	Enterococcus_faecium (1352)
Strain

Assembly

Genome Data Information

Accession	GCF_907165365.1
Assembly Coverage	26

Biosample

Curated Collection Information

Accession	19039078

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	47.4N;8.5E
Original Query Type	coordinates
Coordinates (Lat/Lon)	47.40/8.50
Address	25b, Bauherrenstrasse, Höngg, Kreis 10, Zurich, District Zurich, Zurich, 8049, Switzerland

ECOSYSTEM

Original Query	Homo sapiens,Inguinal/Rectal swab
Classification	gastrointestinal_system,host_associated,rectal
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	diseased
DOID/SYMP	Disease (DOID:4 ) A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP066604.1	See Comparison
NZ_CP066666.1	See Comparison
NZ_CP066479.1	See Comparison
NZ_CP066465.1	See Comparison
NZ_CP066394.1	See Comparison
NZ_CP066426.1	See Comparison
NZ_AP026571.1	See Comparison
NZ_CP096224.1	See Comparison
NZ_CP018826.1	See Comparison
NZ_CP096216.1	See Comparison
NZ_CP076487.1	See Comparison
NZ_CP076482.1	See Comparison
NZ_CP076476.1	See Comparison
NZ_OU015713.1	See Comparison
NZ_OU015952.1	See Comparison
NZ_OU016043.1	See Comparison
NZ_OU016033.1	See Comparison
NZ_CP071966.1	See Comparison
NZ_CP018833.1	See Comparison
NZ_CP040705.1	See Comparison
NZ_CP096216.1	See Comparison
NZ_LR135315.1	See Comparison
NZ_LR135337.1	See Comparison
NZ_LR135329.1	See Comparison
NZ_LR135322.1	See Comparison
NZ_CP023803.1	See Comparison
NZ_CP023793.1	See Comparison
NZ_CP023788.1	See Comparison
NZ_CP023811.1	See Comparison
NZ_CP023807.1	See Comparison
NZ_CP023798.1	See Comparison
NZ_CP023783.1	See Comparison
NZ_CP066604.1	See Comparison
NZ_CP066666.1	See Comparison
NZ_CP066479.1	See Comparison
NZ_CP066465.1	See Comparison
NZ_CP066394.1	See Comparison
NZ_CP066426.1	See Comparison
NZ_AP026571.1	See Comparison
NZ_CP096224.1	See Comparison
NZ_CP076487.1	See Comparison
NZ_CP076482.1	See Comparison
NZ_CP076476.1	See Comparison
NZ_LR135315.1	See Comparison
NZ_CP018826.1	See Comparison
NZ_CP018833.1	See Comparison
NZ_OU015952.1	See Comparison
NZ_OU016043.1	See Comparison
NZ_OU016033.1	See Comparison
NZ_CP071966.1	See Comparison
NZ_CP040705.1	See Comparison
NZ_LR135337.1	See Comparison
NZ_LR135329.1	See Comparison
NZ_LR135322.1	See Comparison
NZ_CP023803.1	See Comparison
NZ_CP023793.1	See Comparison
NZ_CP023788.1	See Comparison
NZ_CP023811.1	See Comparison
NZ_CP023807.1	See Comparison
NZ_CP023798.1	See Comparison
NZ_CP023783.1	See Comparison
NZ_CP066604.1	See Comparison
NZ_CP066666.1	See Comparison
NZ_CP066479.1	See Comparison
NZ_CP066465.1	See Comparison
NZ_CP066394.1	See Comparison
NZ_CP066426.1	See Comparison
NZ_LR135315.1	See Comparison
NZ_CP076487.1	See Comparison
NZ_CP076482.1	See Comparison
NZ_CP076476.1	See Comparison
NZ_OU015952.1	See Comparison
NZ_OU016043.1	See Comparison
NZ_OU016033.1	See Comparison
NZ_AP026571.1	See Comparison
NZ_CP096216.1	See Comparison
NZ_CP096224.1	See Comparison
NZ_CP071966.1	See Comparison
NZ_CP018826.1	See Comparison
NZ_CP018833.1	See Comparison
NZ_CP040705.1	See Comparison
NZ_LR135337.1	See Comparison
NZ_LR135329.1	See Comparison
NZ_LR135322.1	See Comparison
NZ_CP096216.1	See Comparison
NZ_CP066666.1	See Comparison
NZ_CP066479.1	See Comparison
NZ_CP066465.1	See Comparison
NZ_CP066394.1	See Comparison
NZ_CP066426.1	See Comparison
NZ_AP026571.1	See Comparison
NZ_CP023803.1	See Comparison
NZ_CP023793.1	See Comparison
NZ_CP023788.1	See Comparison
NZ_CP023811.1	See Comparison
NZ_CP023807.1	See Comparison
NZ_CP023798.1	See Comparison
NZ_CP023783.1	See Comparison
NZ_CP066604.1	See Comparison
NZ_CP096224.1	See Comparison
NZ_CP076487.1	See Comparison
NZ_CP076482.1	See Comparison
NZ_CP076476.1	See Comparison
NZ_OU015952.1	See Comparison
NZ_OU016043.1	See Comparison
NZ_OU016033.1	See Comparison
NZ_LR135315.1	See Comparison
NZ_CP040705.1	See Comparison
NZ_CP071966.1	See Comparison
NZ_CP018826.1	See Comparison
NZ_CP018833.1	See Comparison
NZ_LR135337.1	See Comparison
NZ_LR135329.1	See Comparison
NZ_LR135322.1	See Comparison
NZ_CP023803.1	See Comparison
NZ_CP023793.1	See Comparison
NZ_CP023788.1	See Comparison
NZ_CP023811.1	See Comparison
NZ_CP023807.1	See Comparison
NZ_CP023798.1	See Comparison
NZ_CP023783.1	See Comparison
NZ_CP066604.1	See Comparison
NZ_CP066479.1	See Comparison
NZ_CP066465.1	See Comparison
NZ_CP066394.1	See Comparison
NZ_CP066426.1	See Comparison
NZ_CP066666.1	See Comparison
NZ_CP076487.1	See Comparison
NZ_CP096216.1	See Comparison
NZ_CP096224.1	See Comparison
NZ_AP026571.1	See Comparison
NZ_CP076482.1	See Comparison
NZ_CP076476.1	See Comparison
NZ_CP040705.1	See Comparison
NZ_CP071966.1	See Comparison
NZ_CP018826.1	See Comparison
NZ_CP018833.1	See Comparison
NZ_OU015952.1	See Comparison
NZ_OU016043.1	See Comparison
NZ_OU016033.1	See Comparison
NZ_CP066604.1	See Comparison
NZ_LR135315.1	See Comparison
NZ_LR135337.1	See Comparison
NZ_LR135329.1	See Comparison
NZ_LR135322.1	See Comparison
NZ_CP023803.1	See Comparison
NZ_CP023793.1	See Comparison
NZ_CP023788.1	See Comparison
NZ_CP023811.1	See Comparison
NZ_CP023807.1	See Comparison
NZ_CP023798.1	See Comparison
NZ_CP023783.1	See Comparison
NZ_CP066479.1	See Comparison
NZ_CP066465.1	See Comparison
NZ_CP066394.1	See Comparison
NZ_CP066426.1	See Comparison
NZ_CP066666.1	See Comparison
NZ_AP026571.1	See Comparison
NZ_CP096216.1	See Comparison
NZ_CP096224.1	See Comparison
NZ_OU015952.1	See Comparison
NZ_OU016033.1	See Comparison
NZ_CP076487.1	See Comparison
NZ_CP076482.1	See Comparison
NZ_CP076476.1	See Comparison
NZ_OU016043.1	See Comparison
NZ_CP023803.1	See Comparison
NZ_CP018826.1	See Comparison
NZ_CP018833.1	See Comparison
NZ_CP040705.1	See Comparison
NZ_LR135315.1	See Comparison
NZ_CP071966.1	See Comparison
NZ_LR135337.1	See Comparison
NZ_LR135329.1	See Comparison
NZ_LR135322.1	See Comparison
NZ_CP023793.1	See Comparison
NZ_CP023788.1	See Comparison
NZ_CP023811.1	See Comparison
NZ_CP023807.1	See Comparison
NZ_CP023798.1	See Comparison
NZ_CP023783.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore