PLSDB
v. 2024_05_31_v2
Home
Browse
Sequence Search
Statistics
Download
API
FAQ
Sequence
Host Taxonomy
Assembly
Biosample
Similar Plasmids
Visualization
Annotations
Typing
Plasmid NZ_CP066426.1
Sequence
Nucleotide Information
Accession
NZ_CP066426.1
Description
Enterococcus faecium strain Dallas 55 plasmid p55_4kb, complete sequence
Source
refseq
Topology
circular
Length
4374 bp
GC Content
0.37 %
Created at NCBI
Dec. 28, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Enterococcus faecium (1352)
Lineage
Superkingdom
Bacteria (2)
Phylum
Bacillota (1239)
Class
Bacilli (91061)
Order
Lactobacillales (186826)
Family
Enterococcaceae (81852)
Genus
Enterococcus (1350)
Species
Enterococcus_faecium (1352)
Strain
Assembly
Genome Data Information
Accession
GCF_016406385.1
Assembly Coverage
112
Biosample
Curated Collection Information
Accession
17038079
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
USA,Dallas
Original Query Type
name
Coordinates (Lat/Lon)
32.78/-96.80
Address
USA,Dallas
ECOSYSTEM
Original Query
Homo sapiens,cell culture,rectal swab
Classification
cell_culture,gastrointestinal_system,host_associated,rectal
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
NZ_CP066425.1
NZ_CP066424.1
NZ_CP066423.1
NZ_CP066422.1
Similar Plasmids
based on Mash distance
NZ_CP066604.1
See Comparison
NZ_CP066666.1
See Comparison
NZ_CP066479.1
See Comparison
NZ_CP066465.1
See Comparison
NZ_CP066394.1
See Comparison
NZ_AP026571.1
See Comparison
AP026578.1
See Comparison
NZ_CP096216.1
See Comparison
NZ_CP096224.1
See Comparison
NZ_CP076487.1
See Comparison
NZ_CP076482.1
See Comparison
NZ_CP076476.1
See Comparison
NZ_LR135315.1
See Comparison
NZ_OU015713.1
See Comparison
NZ_OU015952.1
See Comparison
NZ_OU016043.1
See Comparison
NZ_OU016033.1
See Comparison
NZ_CP040705.1
See Comparison
NZ_CP071966.1
See Comparison
NZ_CP018826.1
See Comparison
NZ_CP018833.1
See Comparison
NZ_LR135337.1
See Comparison
NZ_LR135329.1
See Comparison
NZ_LR135322.1
See Comparison
NZ_CP023803.1
See Comparison
NZ_CP023793.1
See Comparison
NZ_CP023788.1
See Comparison
NZ_CP023811.1
See Comparison
NZ_CP023807.1
See Comparison
NZ_CP023798.1
See Comparison
NZ_CP023783.1
See Comparison
NZ_CP066479.1
See Comparison
NZ_CP066465.1
See Comparison
NZ_CP066394.1
See Comparison
NZ_OU016033.1
See Comparison
NZ_CP066604.1
See Comparison
NZ_CP066666.1
See Comparison
NZ_AP026571.1
See Comparison
AP026578.1
See Comparison
NZ_CP096216.1
See Comparison
NZ_CP096224.1
See Comparison
NZ_CP076487.1
See Comparison
NZ_CP076482.1
See Comparison
NZ_CP076476.1
See Comparison
NZ_CP071966.1
See Comparison
NZ_OU015713.1
See Comparison
NZ_OU015952.1
See Comparison
NZ_OU016043.1
See Comparison
AP026578.1
See Comparison
NZ_LR135337.1
See Comparison
NZ_LR135329.1
See Comparison
NZ_LR135322.1
See Comparison
NZ_CP023803.1
See Comparison
NZ_CP023793.1
See Comparison
NZ_CP023788.1
See Comparison
NZ_CP023811.1
See Comparison
NZ_CP023807.1
See Comparison
NZ_CP023798.1
See Comparison
NZ_CP023783.1
See Comparison
NZ_CP066604.1
See Comparison
NZ_CP066666.1
See Comparison
NZ_CP066479.1
See Comparison
NZ_CP066465.1
See Comparison
NZ_CP066394.1
See Comparison
NZ_CP066426.1
See Comparison
NZ_CP018826.1
See Comparison
NZ_CP018833.1
See Comparison
NZ_CP040705.1
See Comparison
NZ_LR135315.1
See Comparison
NZ_AP026571.1
See Comparison
NZ_CP018826.1
See Comparison
NZ_CP096216.1
See Comparison
NZ_CP096224.1
See Comparison
NZ_OU015713.1
See Comparison
NZ_OU015952.1
See Comparison
NZ_OU016043.1
See Comparison
NZ_OU016033.1
See Comparison
NZ_CP076487.1
See Comparison
NZ_CP076482.1
See Comparison
NZ_CP076476.1
See Comparison
NZ_CP071966.1
See Comparison
NZ_CP018833.1
See Comparison
NZ_CP096216.1
See Comparison
NZ_LR135315.1
See Comparison
NZ_LR135337.1
See Comparison
NZ_AP026571.1
See Comparison
AP026578.1
See Comparison
NZ_CP040705.1
See Comparison
NZ_LR135329.1
See Comparison
NZ_LR135322.1
See Comparison
NZ_CP023803.1
See Comparison
NZ_CP023793.1
See Comparison
NZ_CP023788.1
See Comparison
NZ_CP023811.1
See Comparison
NZ_CP023807.1
See Comparison
NZ_CP023798.1
See Comparison
NZ_CP023783.1
See Comparison
NZ_CP066604.1
See Comparison
NZ_CP066666.1
See Comparison
NZ_CP066479.1
See Comparison
NZ_CP066465.1
See Comparison
NZ_CP066394.1
See Comparison
NZ_CP096224.1
See Comparison
NZ_OU015713.1
See Comparison
NZ_CP076487.1
See Comparison
NZ_CP076482.1
See Comparison
NZ_CP076476.1
See Comparison
NZ_OU015952.1
See Comparison
NZ_OU016043.1
See Comparison
NZ_OU016033.1
See Comparison
NZ_CP023803.1
See Comparison
NZ_CP071966.1
See Comparison
NZ_CP018826.1
See Comparison
NZ_CP018833.1
See Comparison
NZ_CP040705.1
See Comparison
NZ_LR135329.1
See Comparison
NZ_LR135322.1
See Comparison
NZ_LR135315.1
See Comparison
NZ_LR135337.1
See Comparison
NZ_CP023793.1
See Comparison
NZ_CP023788.1
See Comparison
NZ_CP023811.1
See Comparison
NZ_CP023807.1
See Comparison
NZ_CP023798.1
See Comparison
NZ_CP023783.1
See Comparison
NZ_CP076487.1
See Comparison
NZ_CP066604.1
See Comparison
NZ_CP066666.1
See Comparison
NZ_CP066479.1
See Comparison
NZ_CP066465.1
See Comparison
NZ_CP066394.1
See Comparison
NZ_AP026571.1
See Comparison
AP026578.1
See Comparison
NZ_CP096216.1
See Comparison
NZ_CP096224.1
See Comparison
NZ_CP076482.1
See Comparison
NZ_CP076476.1
See Comparison
NZ_OU015713.1
See Comparison
NZ_OU015952.1
See Comparison
NZ_OU016043.1
See Comparison
NZ_OU016033.1
See Comparison
NZ_LR135315.1
See Comparison
NZ_CP040705.1
See Comparison
NZ_CP071966.1
See Comparison
NZ_CP018826.1
See Comparison
NZ_CP018833.1
See Comparison
NZ_LR135337.1
See Comparison
NZ_CP023803.1
See Comparison
NZ_LR135329.1
See Comparison
NZ_LR135322.1
See Comparison
NZ_CP023793.1
See Comparison
NZ_CP023788.1
See Comparison
NZ_CP023811.1
See Comparison
NZ_CP023807.1
See Comparison
NZ_CP023798.1
See Comparison
NZ_CP023783.1
See Comparison
NZ_CP066604.1
See Comparison
NZ_CP066666.1
See Comparison
NZ_CP066479.1
See Comparison
NZ_CP066465.1
See Comparison
NZ_CP066394.1
See Comparison
NZ_CP076487.1
See Comparison
NZ_AP026571.1
See Comparison
AP026578.1
See Comparison
NZ_CP096216.1
See Comparison
NZ_CP096224.1
See Comparison
NZ_CP076482.1
See Comparison
NZ_CP076476.1
See Comparison
NZ_OU015713.1
See Comparison
NZ_OU015952.1
See Comparison
NZ_OU016043.1
See Comparison
NZ_OU016033.1
See Comparison
NZ_CP018826.1
See Comparison
NZ_CP071966.1
See Comparison
NZ_CP018833.1
See Comparison
NZ_CP040705.1
See Comparison
NZ_LR135315.1
See Comparison
NZ_LR135337.1
See Comparison
NZ_LR135329.1
See Comparison
NZ_LR135322.1
See Comparison
NZ_CP023803.1
See Comparison
NZ_CP023793.1
See Comparison
NZ_CP023788.1
See Comparison
NZ_CP023811.1
See Comparison
NZ_CP023807.1
See Comparison
NZ_CP023798.1
See Comparison
NZ_CP023783.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore