Plasmid NZ_MK477606.1

Sequence

Nucleotide Information

Accession	NZ_MK477606.1
Description	Salmonella enterica strain SH15G1450 plasmid pSH15G1450, complete sequence
Source	refseq
Topology	circular
Length	254389 bp
GC Content	0.47 %
Created at NCBI	June 4, 2020

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Salmonella enterica (28901)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Salmonella (590)
Species	Salmonella_enterica (28901)
Strain

Biosample

Curated Collection Information

Accession	14229047

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	None
Original Query Type	None
Coordinates (Lat/Lon)
Address	None

ECOSYSTEM

Original Query	Homo sapiens
Classification	host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	None
DOID/SYMP

Visualization

Similar Plasmids

based on Mash distance

NZ_CP035918.1	See Comparison
NZ_CP041174.1	See Comparison
NZ_MK673547.1	See Comparison
CP142544.1	See Comparison
NZ_MK477617.1	See Comparison
NZ_MK477612.1	See Comparison
NZ_MK477616.1	See Comparison
NZ_MK673549.1	See Comparison
NZ_MK673548.1	See Comparison
NZ_MK477614.1	See Comparison
NZ_MK477605.1	See Comparison
NZ_MG773376.1	See Comparison
NZ_MH522418.1	See Comparison
NZ_KU341381.1	See Comparison
NZ_CP101383.1	See Comparison
NZ_CP019394.1	See Comparison
NZ_CP061120.1	See Comparison
NZ_CP061125.1	See Comparison
NZ_CP101391.1	See Comparison
NZ_MW264504.1	See Comparison
NZ_CP091555.1	See Comparison
NZ_CP091570.1	See Comparison
NZ_CP086221.1	See Comparison
NZ_MW356909.1	See Comparison
NZ_MK673547.1	See Comparison
NZ_CP075373.1	See Comparison
NZ_CP035918.1	See Comparison
NZ_CP041174.1	See Comparison
CP142544.1	See Comparison
NZ_MK477617.1	See Comparison
NZ_MK477612.1	See Comparison
NZ_MK477616.1	See Comparison
NZ_MK673549.1	See Comparison
NZ_MK673548.1	See Comparison
NZ_MK477614.1	See Comparison
NZ_MK477605.1	See Comparison
NZ_MG773376.1	See Comparison
NZ_MH522418.1	See Comparison
NZ_KU341381.1	See Comparison
NZ_CP019394.1	See Comparison
NZ_CP061120.1	See Comparison
NZ_CP091555.1	See Comparison
NZ_CP061125.1	See Comparison
NZ_CP101383.1	See Comparison
NZ_CP101391.1	See Comparison
NZ_CP091570.1	See Comparison
NZ_CP086221.1	See Comparison
NZ_MW356909.1	See Comparison
CP142544.1	See Comparison
NZ_CP041174.1	See Comparison
NZ_MW264504.1	See Comparison
NZ_CP075373.1	See Comparison
NZ_CP035918.1	See Comparison
NZ_MK673547.1	See Comparison
NZ_MK477617.1	See Comparison
NZ_MK477612.1	See Comparison
NZ_MK477616.1	See Comparison
NZ_MK673549.1	See Comparison
NZ_MK673548.1	See Comparison
NZ_MK477614.1	See Comparison
NZ_MK477605.1	See Comparison
NZ_MH522418.1	See Comparison
NZ_CP101383.1	See Comparison
NZ_MG773376.1	See Comparison
NZ_KU341381.1	See Comparison
NZ_CP061120.1	See Comparison
NZ_CP019394.1	See Comparison
NZ_CP061125.1	See Comparison
NZ_CP101391.1	See Comparison
NZ_CP035918.1	See Comparison
NZ_CP091555.1	See Comparison
NZ_CP091570.1	See Comparison
NZ_CP086221.1	See Comparison
NZ_MW356909.1	See Comparison
NZ_CP075373.1	See Comparison
NZ_MW264504.1	See Comparison
NZ_KU341381.1	See Comparison
CP142544.1	See Comparison
NZ_MK673547.1	See Comparison
NZ_MK477617.1	See Comparison
NZ_MK477612.1	See Comparison
NZ_MK477616.1	See Comparison
NZ_MK673549.1	See Comparison
NZ_MK673548.1	See Comparison
NZ_MK477614.1	See Comparison
NZ_MK477605.1	See Comparison
NZ_MH522418.1	See Comparison
NZ_CP041174.1	See Comparison
NZ_MG773376.1	See Comparison
NZ_CP101383.1	See Comparison
NZ_CP019394.1	See Comparison
NZ_CP061120.1	See Comparison
NZ_CP061125.1	See Comparison
NZ_CP101391.1	See Comparison
NZ_MW356909.1	See Comparison
NZ_CP091555.1	See Comparison
NZ_CP091570.1	See Comparison
NZ_CP086221.1	See Comparison
NZ_CP035918.1	See Comparison
NZ_MW264504.1	See Comparison
NZ_CP075373.1	See Comparison
NZ_MK673549.1	See Comparison
NZ_CP041174.1	See Comparison
CP142544.1	See Comparison
NZ_MK673548.1	See Comparison
NZ_MK477614.1	See Comparison
NZ_MK477605.1	See Comparison
NZ_MH522418.1	See Comparison
NZ_MK673547.1	See Comparison
NZ_MK477617.1	See Comparison
NZ_MK477612.1	See Comparison
NZ_MK477616.1	See Comparison
NZ_CP019394.1	See Comparison
NZ_MG773376.1	See Comparison
NZ_KU341381.1	See Comparison
NZ_CP091555.1	See Comparison
NZ_CP101383.1	See Comparison
NZ_CP101391.1	See Comparison
NZ_CP061120.1	See Comparison
NZ_CP061125.1	See Comparison
NZ_CP091570.1	See Comparison
NZ_MW356909.1	See Comparison
NZ_CP086221.1	See Comparison
NZ_CP075373.1	See Comparison
NZ_MW264504.1	See Comparison
NZ_CP035918.1	See Comparison
NZ_MH522418.1	See Comparison
CP142544.1	See Comparison
NZ_MK673547.1	See Comparison
NZ_MK477617.1	See Comparison
NZ_MK477612.1	See Comparison
NZ_MK477616.1	See Comparison
NZ_MK673549.1	See Comparison
NZ_MK477606.1	See Comparison
NZ_MK673548.1	See Comparison
NZ_MK477614.1	See Comparison
NZ_MK477605.1	See Comparison
NZ_CP041174.1	See Comparison
NZ_CP101383.1	See Comparison
NZ_CP061120.1	See Comparison
NZ_CP061125.1	See Comparison
NZ_MG773376.1	See Comparison
NZ_KU341381.1	See Comparison
NZ_CP019394.1	See Comparison
NZ_CP101391.1	See Comparison
NZ_CP086221.1	See Comparison
NZ_CP091555.1	See Comparison
NZ_CP091570.1	See Comparison
NZ_MW264504.1	See Comparison
NZ_MW356909.1	See Comparison
NZ_CP075373.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore