Plasmid NZ_CP154395.1

Sequence

Nucleotide Information

Accession NZ_CP154395.1
Description Klebsiella pneumoniae strain KP33 plasmid pKP33-tetA, complete sequence
Source refseq
Topology circular
Length 87095 bp
GC Content 0.54 %
Created at NCBI May 8, 2024



Assembly

Genome Data Information

Accession GCF_039520115.1
Assembly Coverage 242


Biosample

Curated Collection Information

Accession 41076125

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,Ningxia
Original Query Type name
Coordinates (Lat/Lon) 37.00/106.00
Address China,Ningxia

ECOSYSTEM
Original Query pure culture,sputum
Classification cell_culture,host_associated,respiratory_system
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization


Plasmids from same Biosample



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based on Mash distance

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NZ_CP073375.1 See Comparison
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NZ_CP136271.1 See Comparison
NZ_CP130664.1 See Comparison
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NZ_CP152451.1 See Comparison
NZ_CP118694.1 See Comparison
NZ_CP127156.1 See Comparison
NZ_CP125341.1 See Comparison
NZ_CP125348.1 See Comparison
NZ_CP154276.1 See Comparison
NZ_CP154421.1 See Comparison
NZ_CP152446.1 See Comparison
NZ_CP154305.1 See Comparison
NZ_CP141783.1 See Comparison
NZ_CP154390.1 See Comparison
NZ_CP152442.1 See Comparison
NZ_CP146604.1 See Comparison
NZ_CP146194.1 See Comparison
NZ_CP147743.1 See Comparison
NZ_CP147752.1 See Comparison
NZ_CP141669.1 See Comparison
NZ_CP141603.1 See Comparison
NZ_CP069176.1 See Comparison
NZ_CP054783.1 See Comparison
NZ_CP054753.1 See Comparison
NZ_CP054765.1 See Comparison
NZ_CP054741.1 See Comparison
NZ_CP047195.1 See Comparison
NZ_CP032243.1 See Comparison
NZ_CP141068.1 See Comparison
NZ_CP054729.1 See Comparison
NZ_CP054747.1 See Comparison
NZ_CP054771.1 See Comparison
NZ_CP054759.1 See Comparison
NZ_CP054723.1 See Comparison
NZ_CP054735.1 See Comparison
NZ_CP054777.1 See Comparison
NZ_CP066257.1 See Comparison
NZ_CP063836.1 See Comparison
NZ_CP064238.1 See Comparison
NZ_CP064244.1 See Comparison
NZ_MH643790.1 See Comparison
NZ_CP107349.1 See Comparison
NZ_MN182748.1 See Comparison
NZ_MT035876.1 See Comparison
NZ_MT090960.1 See Comparison
NZ_CP119177.1 See Comparison
NZ_CP031937.1 See Comparison
NZ_CP116906.1 See Comparison
NZ_CP107376.1 See Comparison
NZ_CP107387.1 See Comparison
NZ_CP109976.1 See Comparison
NZ_CP107331.1 See Comparison
NZ_CP107324.1 See Comparison
NZ_CP107316.1 See Comparison
NZ_CP107338.1 See Comparison
NZ_CP109951.1 See Comparison
NZ_CP100109.1 See Comparison
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NZ_CP087154.1 See Comparison
NZ_CP092796.1 See Comparison
NZ_CP092789.1 See Comparison
NZ_CP090465.1 See Comparison
NZ_CP090435.1 See Comparison
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NZ_CP091071.1 See Comparison
NZ_CP085892.1 See Comparison
NZ_CP082756.1 See Comparison
NZ_CP082762.1 See Comparison
NZ_CP082768.1 See Comparison
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NZ_CP136848.1 See Comparison
CP139222.1 See Comparison
CP139240.1 See Comparison
NZ_CP138522.1 See Comparison
NZ_CP136271.1 See Comparison
NZ_CP137349.1 See Comparison
NZ_CP132051.1 See Comparison
NZ_CP130664.1 See Comparison
NZ_CP130267.1 See Comparison
NZ_CP130261.1 See Comparison


Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore