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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP115323.1
Sequence
Nucleotide Information
Accession
NZ_CP115323.1
Description
Escherichia coli strain CUVET18-565 plasmid pCUVET18-565.3, complete sequence
Source
refseq
Topology
circular
Length
2113 bp
GC Content
0.47 %
Created at NCBI
Sept. 3, 2023
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (562)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Assembly
Genome Data Information
Accession
GCF_030995185.1
Assembly Coverage
100
Biosample
Curated Collection Information
Accession
32339854
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
Thailand,Bangkok
Original Query Type
name
Coordinates (Lat/Lon)
13.75/100.49
Address
Thailand,Bangkok
ECOSYSTEM
Original Query
dog,pure culture,urine
Classification
cell_culture,host_associated,urinary_system
Host-associated Taxon
Canis lupus (
9615
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
NZ_CP115322.1
NZ_CP115321.1
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based on Mash distance
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AP027720.1
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NZ_CP023902.1
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NZ_CP135222.1
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NZ_CP135229.1
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NZ_CP135216.1
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NZ_AP027977.1
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NZ_CP135663.1
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NZ_CP059338.1
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NZ_CP115347.1
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NZ_CP115323.1
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NZ_CP059341.1
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NZ_CP058920.1
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CP125070.1
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CP125026.1
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CP125019.1
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CP125058.1
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CP125032.1
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CP125052.1
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NZ_CP151381.1
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NZ_CP145688.1
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CP117209.1
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NZ_CP091690.1
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NZ_CP091697.1
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NZ_CP076347.1
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NZ_CP059133.1
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NZ_CP079691.1
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NZ_CP079616.1
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NZ_CP083080.1
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NZ_CP085067.1
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CP077346.1
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CP077278.1
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NZ_CP076316.1
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CP077284.1
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CP077255.1
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CP077227.1
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MW363524.1
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NZ_AP023234.2
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NZ_AP023223.2
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NZ_CP008719.1
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NZ_CP053255.2
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NZ_CP069674.1
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NZ_CP072472.1
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NZ_CP067254.1
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NC_016824.1
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NZ_CP011141.1
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NC_009347.1
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NZ_CP029105.1
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NZ_CP023648.1
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NZ_CP034961.1
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NZ_CP033766.1
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NZ_CP030115.1
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NZ_CP029366.1
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NZ_CP135725.1
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NZ_CP027132.1
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NZ_CP023902.1
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AP027720.1
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NZ_CP135222.1
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NZ_CP135229.1
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NZ_CP135216.1
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NZ_CP135663.1
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NZ_CP123236.1
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NZ_CP082051.1
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NZ_CP082065.1
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NZ_AP027977.1
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NZ_AP027984.1
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CP125019.1
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NZ_CP115347.1
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NZ_OZ038810.1
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See Comparison
NZ_CP149251.1
See Comparison
NZ_CP151381.1
See Comparison
NZ_CP151363.1
See Comparison
NZ_CP151356.1
See Comparison
NZ_CP151401.1
See Comparison
NZ_CP151310.1
See Comparison
NZ_CP151342.1
See Comparison
NZ_CP145626.1
See Comparison
NZ_CP145644.1
See Comparison
NZ_CP145688.1
See Comparison
NZ_CP145654.1
See Comparison
NZ_CP140509.1
See Comparison
NZ_AP027842.1
See Comparison
NZ_AP027499.1
See Comparison
NZ_CP142952.1
See Comparison
NZ_CP048319.1
See Comparison
CP054463.1
See Comparison
NZ_CP054361.1
See Comparison
CP054341.1
See Comparison
CP054324.1
See Comparison
NZ_CP048370.1
See Comparison
NZ_CP048366.1
See Comparison
CP056791.1
See Comparison
CP056408.1
See Comparison
NZ_CP058660.1
See Comparison
NZ_CP058655.1
See Comparison
NZ_CP058665.1
See Comparison
NZ_CP054218.1
See Comparison
NZ_CP043411.1
See Comparison
NZ_AP022657.1
See Comparison
CP052212.1
See Comparison
NZ_CP050362.1
See Comparison
NZ_CP045788.1
See Comparison
NZ_LR890540.1
See Comparison
NZ_CP046422.1
See Comparison
NZ_CP070444.1
See Comparison
NZ_CP070424.1
See Comparison
NZ_CP070458.1
See Comparison
NZ_CP070031.1
See Comparison
NZ_CP069869.1
See Comparison
NZ_CP070004.1
See Comparison
NZ_CP070081.1
See Comparison
NZ_CP070099.1
See Comparison
NZ_AP022170.1
See Comparison
NZ_CP061112.1
See Comparison
NZ_LR890414.1
See Comparison
NZ_CP064850.1
See Comparison
NZ_CP102700.1
See Comparison
NZ_AP022212.1
See Comparison
NZ_AP022054.1
See Comparison
NZ_CP063007.1
See Comparison
NZ_CP060427.1
See Comparison
NZ_AP022104.1
See Comparison
NZ_AP021968.1
See Comparison
NZ_OX030736.1
See Comparison
NZ_OP242305.1
See Comparison
NZ_CP116922.1
See Comparison
NZ_CP116196.1
See Comparison
NZ_CP116134.1
See Comparison
NZ_CP116143.1
See Comparison
NZ_CP103565.1
See Comparison
NZ_CP103625.1
See Comparison
NZ_CP103476.1
See Comparison
NZ_CP101231.1
See Comparison
CP117209.1
See Comparison
NZ_CP116105.1
See Comparison
NZ_CP116122.1
See Comparison
NZ_CP116193.1
See Comparison
NZ_CP061366.1
See Comparison
NZ_CP060119.1
See Comparison
NZ_CP091711.1
See Comparison
OW969723.1
See Comparison
NZ_CP060960.1
See Comparison
NZ_CP043278.1
See Comparison
NZ_CP101208.1
See Comparison
NZ_CP069211.1
See Comparison
NZ_CP060945.1
See Comparison
NZ_CP091690.1
See Comparison
NZ_CP091697.1
See Comparison
NZ_CP091663.1
See Comparison
NZ_CP091990.1
See Comparison
CP067709.1
See Comparison
NZ_CP054163.1
See Comparison
NZ_CP083080.1
See Comparison
NZ_CP085067.1
See Comparison
CP077383.1
See Comparison
NZ_CP049842.1
See Comparison
NZ_CP059133.1
See Comparison
CP077346.1
See Comparison
CP077278.1
See Comparison
CP077284.1
See Comparison
CP077255.1
See Comparison
CP077227.1
See Comparison
NZ_CP049856.1
See Comparison
NZ_CP079691.1
See Comparison
NZ_CP079616.1
See Comparison
NZ_CP076316.1
See Comparison
CP077358.1
See Comparison
NZ_CP072472.1
See Comparison
MW363524.1
See Comparison
NZ_CP076347.1
See Comparison
NZ_CP053255.2
See Comparison
NZ_CP067254.1
See Comparison
NZ_AP023234.2
See Comparison
NZ_AP023223.2
See Comparison
NZ_CP069674.1
See Comparison
NZ_CP011141.1
See Comparison
NZ_CP008719.1
See Comparison
NC_009347.1
See Comparison
NC_016824.1
See Comparison
NZ_CP030115.1
See Comparison
NZ_CP023648.1
See Comparison
NZ_CP034961.1
See Comparison
NZ_CP033766.1
See Comparison
NZ_CP029366.1
See Comparison
NZ_CP027132.1
See Comparison
NZ_CP029105.1
See Comparison
NZ_CP023902.1
See Comparison
AP027720.1
See Comparison
NZ_CP135222.1
See Comparison
NZ_CP135725.1
See Comparison
NZ_CP135663.1
See Comparison
NZ_CP135229.1
See Comparison
NZ_CP135216.1
See Comparison
NZ_CP082051.1
See Comparison
NZ_CP058899.1
See Comparison
NZ_CP059338.1
See Comparison
NZ_CP115347.1
See Comparison
NZ_CP058924.1
See Comparison
NZ_CP059341.1
See Comparison
NZ_CP058920.1
See Comparison
NZ_CP082065.1
See Comparison
NZ_AP027977.1
See Comparison
NZ_AP027984.1
See Comparison
CP125070.1
See Comparison
NZ_CP124404.1
See Comparison
CP125026.1
See Comparison
CP125019.1
See Comparison
CP125058.1
See Comparison
CP125032.1
See Comparison
CP125052.1
See Comparison
NZ_CP151363.1
See Comparison
NZ_CP124383.1
See Comparison
NZ_OZ038810.1
See Comparison
NZ_OZ040272.1
See Comparison
NZ_CP146293.2
See Comparison
NZ_CP123236.1
See Comparison
NZ_CP149251.1
See Comparison
NZ_CP145626.1
See Comparison
NZ_CP151356.1
See Comparison
NZ_CP151401.1
See Comparison
NZ_CP151310.1
See Comparison
NZ_CP151342.1
See Comparison
NZ_CP151381.1
See Comparison
NZ_CP151675.1
See Comparison
NZ_CP145644.1
See Comparison
NZ_CP145688.1
See Comparison
NZ_AP027842.1
See Comparison
NZ_CP145654.1
See Comparison
CP054463.1
See Comparison
NZ_AP027499.1
See Comparison
NZ_CP140509.1
See Comparison
NZ_CP142952.1
See Comparison
CP056791.1
See Comparison
CP056408.1
See Comparison
NZ_CP058660.1
See Comparison
NZ_CP058655.1
See Comparison
NZ_CP058665.1
See Comparison
NZ_CP054218.1
See Comparison
NZ_CP054361.1
See Comparison
CP054341.1
See Comparison
CP054324.1
See Comparison
NZ_CP043411.1
See Comparison
NZ_CP048366.1
See Comparison
NZ_AP022657.1
See Comparison
CP052212.1
See Comparison
NZ_CP050362.1
See Comparison
NZ_CP045788.1
See Comparison
NZ_CP048319.1
See Comparison
NZ_CP048370.1
See Comparison
NZ_CP064850.1
See Comparison
NZ_CP070031.1
See Comparison
NZ_CP069869.1
See Comparison
NZ_CP070004.1
See Comparison
NZ_CP070081.1
See Comparison
NZ_CP070099.1
See Comparison
NZ_CP061112.1
See Comparison
NZ_CP046422.1
See Comparison
NZ_CP070444.1
See Comparison
NZ_CP070424.1
See Comparison
NZ_CP070458.1
See Comparison
NZ_LR890540.1
See Comparison
NZ_LR890414.1
See Comparison
NZ_AP022212.1
See Comparison
NZ_AP022170.1
See Comparison
NZ_CP063007.1
See Comparison
NZ_CP060427.1
See Comparison
NZ_AP022104.1
See Comparison
NZ_AP021968.1
See Comparison
NZ_AP022054.1
See Comparison
CP117209.1
See Comparison
NZ_CP116922.1
See Comparison
NZ_CP102700.1
See Comparison
NZ_OP242305.1
See Comparison
NZ_CP116105.1
See Comparison
NZ_CP116143.1
See Comparison
NZ_CP116122.1
See Comparison
NZ_CP116193.1
See Comparison
NZ_CP116196.1
See Comparison
NZ_CP116134.1
See Comparison
NZ_CP061366.1
See Comparison
NZ_CP060119.1
See Comparison
NZ_CP103565.1
See Comparison
OW969723.1
See Comparison
NZ_CP103625.1
See Comparison
NZ_CP103476.1
See Comparison
NZ_CP101231.1
See Comparison
NZ_CP101208.1
See Comparison
NZ_OX030736.1
See Comparison
NZ_CP060960.1
See Comparison
NZ_CP069211.1
See Comparison
NZ_CP043278.1
See Comparison
NZ_CP091711.1
See Comparison
NZ_CP091690.1
See Comparison
NZ_CP049856.1
See Comparison
NZ_CP091697.1
See Comparison
NZ_CP091663.1
See Comparison
NZ_CP091990.1
See Comparison
NZ_CP083080.1
See Comparison
NZ_CP085067.1
See Comparison
NZ_CP049842.1
See Comparison
NZ_CP060945.1
See Comparison
CP067709.1
See Comparison
NZ_CP054163.1
See Comparison
NZ_CP079691.1
See Comparison
NZ_CP079616.1
See Comparison
CP077383.1
See Comparison
NZ_CP076316.1
See Comparison
MW363524.1
See Comparison
NZ_CP059133.1
See Comparison
CP077284.1
See Comparison
CP077255.1
See Comparison
CP077227.1
See Comparison
CP077358.1
See Comparison
CP077346.1
See Comparison
NZ_CP076347.1
See Comparison
CP077278.1
See Comparison
NZ_CP072472.1
See Comparison
NZ_CP053255.2
See Comparison
NZ_AP023234.2
See Comparison
NZ_AP023223.2
See Comparison
NZ_CP067254.1
See Comparison
NZ_CP069674.1
See Comparison
NZ_CP011141.1
See Comparison
NZ_CP008719.1
See Comparison
NC_016824.1
See Comparison
NZ_CP029105.1
See Comparison
NZ_CP023648.1
See Comparison
NZ_CP034961.1
See Comparison
NZ_CP033766.1
See Comparison
NZ_CP029366.1
See Comparison
NC_009347.1
See Comparison
NZ_CP030115.1
See Comparison
NZ_CP135725.1
See Comparison
NZ_CP027132.1
See Comparison
NZ_CP023902.1
See Comparison
AP027720.1
See Comparison
NZ_CP135663.1
See Comparison
NZ_CP135222.1
See Comparison
NZ_CP123236.1
See Comparison
NZ_CP135229.1
See Comparison
NZ_CP135216.1
See Comparison
NZ_CP058899.1
See Comparison
NZ_CP082051.1
See Comparison
NZ_CP082065.1
See Comparison
NZ_AP027977.1
See Comparison
NZ_AP027984.1
See Comparison
CP125070.1
See Comparison
CP125026.1
See Comparison
CP125019.1
See Comparison
CP125058.1
See Comparison
CP125032.1
See Comparison
CP125052.1
See Comparison
NZ_CP059338.1
See Comparison
NZ_CP115347.1
See Comparison
NZ_CP058924.1
See Comparison
NZ_CP059341.1
See Comparison
NZ_CP058920.1
See Comparison
NZ_CP124404.1
See Comparison
NZ_CP124383.1
See Comparison
NZ_CP149251.1
See Comparison
NZ_OZ040272.1
See Comparison
NZ_CP146293.2
See Comparison
NZ_OZ038810.1
See Comparison
NZ_CP151356.1
See Comparison
NZ_CP151675.1
See Comparison
NZ_CP151401.1
See Comparison
NZ_CP151310.1
See Comparison
NZ_CP151342.1
See Comparison
NZ_CP151381.1
See Comparison
NZ_CP151363.1
See Comparison
NZ_CP145626.1
See Comparison
NZ_CP145644.1
See Comparison
NZ_CP145688.1
See Comparison
NZ_AP027842.1
See Comparison
NZ_AP027499.1
See Comparison
NZ_CP145654.1
See Comparison
NZ_CP058660.1
See Comparison
CP056791.1
See Comparison
NZ_CP142952.1
See Comparison
NZ_CP140509.1
See Comparison
NZ_CP058655.1
See Comparison
NZ_CP058665.1
See Comparison
CP054463.1
See Comparison
CP056408.1
See Comparison
NZ_CP054218.1
See Comparison
NZ_CP054361.1
See Comparison
CP054341.1
See Comparison
CP054324.1
See Comparison
NZ_AP022657.1
See Comparison
NZ_CP043411.1
See Comparison
NZ_CP070424.1
See Comparison
NZ_CP050362.1
See Comparison
NZ_CP048366.1
See Comparison
NZ_CP045788.1
See Comparison
CP052212.1
See Comparison
NZ_CP048319.1
See Comparison
NZ_CP048370.1
See Comparison
NZ_CP046422.1
See Comparison
NZ_CP070444.1
See Comparison
NZ_CP070458.1
See Comparison
NZ_CP070004.1
See Comparison
NZ_CP070081.1
See Comparison
NZ_CP070031.1
See Comparison
NZ_CP070099.1
See Comparison
NZ_CP069869.1
See Comparison
NZ_LR890414.1
See Comparison
NZ_LR890540.1
See Comparison
NZ_CP061112.1
See Comparison
Identical Plasmids
100% Sequence Identity
CP125070.1
Sequence
Accession
:
CP125070.1
Description
: Escherichia coli strain KFS-B24 plasmid pKFS-B24_6, complete sequence
Source
: insd
Created at NCBI
: May 16, 2023
Host Taxonomy
Assigned Host
:
Escherichia coli (562)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Escherichia (561)
Species
:
Escherichia_coli (562)
Strain
:
Biosample
Accession
:
34598740
GEOGRAPHICAL INFORMATION
Original Query
: 0.19N;32.35E
Original Query Type
: coordinates
Address
: Senene Buzingu, Mpigi, Central Region, Uganda
Coordinates
(Lat/Lon): 0.19/32.35
ECOSYSTEM
Original Query
: Fecal sludge
Classification
: fecal,gastrointestinal_system,host_associated
Host-associated Taxon
:
Visualization
PNG
JSON
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore