Plasmid NZ_CP101523.1

Sequence

Nucleotide Information

Accession	NZ_CP101523.1
Description	Escherichia coli O157:H7 strain MD2019EC2705C4 plasmid pCFSAN101716, complete sequence
Source	refseq
Topology	circular
Length	92997 bp
GC Content	0.48 %
Created at NCBI	July 18, 2022

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Escherichia coli (83334)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Escherichia (561)
Species	Escherichia_coli (562)
Strain

Assembly

Genome Data Information

Accession	GCF_012915625.1
Assembly Coverage	700

Biosample

Curated Collection Information

Accession	13348336

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	USA,MD
Original Query Type	name
Coordinates (Lat/Lon)	39.52/-76.94
Address	USA,MD

ECOSYSTEM

Original Query	food,lettuce from ready salad pack
Classification	food
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Similar Plasmids

based on Mash distance

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NZ_CP136756.1	See Comparison
NZ_CP133127.1	See Comparison
NZ_CP133132.1	See Comparison
NZ_CP133121.1	See Comparison
NZ_CP133129.1	See Comparison
NZ_CP133125.1	See Comparison
CP133123.1	See Comparison
NZ_CP132296.1	See Comparison
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CP126905.1	See Comparison
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NZ_CP143965.1	See Comparison
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NZ_CP145943.1	See Comparison
NZ_CP143967.1	See Comparison
NZ_CP143969.1	See Comparison
NZ_CP111097.1	See Comparison
NZ_CP038364.1	See Comparison
NZ_CP140517.1	See Comparison
NZ_CP038429.1	See Comparison
NZ_CP038406.1	See Comparison
NZ_CP038314.1	See Comparison
NZ_CP111104.1	See Comparison
NZ_CP038352.1	See Comparison
NZ_CP038410.1	See Comparison
NZ_CP038350.1	See Comparison
NZ_CP038323.1	See Comparison
NZ_CP038373.1	See Comparison
NZ_CP038359.1	See Comparison
NZ_AP018692.1	See Comparison
NZ_CP038343.1	See Comparison
NZ_CP038327.1	See Comparison
NZ_CP034385.1	See Comparison
CP051805.1	See Comparison
CP041748.1	See Comparison
NZ_CP038495.1	See Comparison
NZ_CP038497.1	See Comparison
NZ_CP066760.1	See Comparison
CP051835.1	See Comparison
CP051832.1	See Comparison
CP051829.1	See Comparison
CP051826.1	See Comparison
NZ_CP066757.1	See Comparison
NZ_CP103865.1	See Comparison
NZ_CP064169.1	See Comparison
NZ_CP104640.1	See Comparison
NZ_CP062161.1	See Comparison
NZ_CP120945.1	See Comparison
NZ_CP104310.1	See Comparison
NZ_CP064384.1	See Comparison
NZ_CP012803.1	See Comparison
CP090859.1	See Comparison
CP090861.1	See Comparison
NZ_CP089271.1	See Comparison
NZ_CP089033.1	See Comparison
NZ_CP089035.1	See Comparison
NZ_CP017670.1	See Comparison
NZ_CP017252.1	See Comparison
NZ_CP017250.1	See Comparison
NZ_CP017445.1	See Comparison
NZ_CP017441.1	See Comparison
NC_017907.1	See Comparison
NZ_CP015022.1	See Comparison
NZ_CP008958.1	See Comparison
NZ_CP028697.1	See Comparison
NC_019041.1	See Comparison
NZ_CP032806.1	See Comparison
NZ_CP032798.1	See Comparison
NZ_CP044144.1	See Comparison
NZ_CP044139.1	See Comparison
NZ_CP044146.1	See Comparison
NZ_CP028699.1	See Comparison
NZ_CP028694.1	See Comparison
NZ_CP028689.1	See Comparison
NZ_CP028686.1	See Comparison
NZ_CP028692.1	See Comparison
NZ_CP028701.1	See Comparison
NZ_CP028684.1	See Comparison
NZ_CP040571.1	See Comparison
NZ_CP034807.1	See Comparison
NZ_CP031914.1	See Comparison
NZ_CP028608.1	See Comparison
NZ_CP028653.1	See Comparison
NZ_CP028651.1	See Comparison
NZ_CP028655.1	See Comparison
NZ_CP028612.1	See Comparison
NZ_CP136756.1	See Comparison
NZ_CP022688.1	See Comparison
NZ_CP034805.1	See Comparison
NZ_CP018626.1	See Comparison
NC_002128.1	See Comparison
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NZ_CP124743.1	See Comparison
NZ_CP133127.1	See Comparison
NZ_CP133132.1	See Comparison
NZ_CP133121.1	See Comparison
NZ_CP133129.1	See Comparison
NZ_CP133125.1	See Comparison
CP133123.1	See Comparison
CP126905.1	See Comparison
NZ_CP132296.1	See Comparison
NZ_CP132299.1	See Comparison
NZ_CP143965.1	See Comparison
NZ_CP149467.1	See Comparison
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NZ_CP145943.1	See Comparison
NZ_CP143967.1	See Comparison
NZ_CP143969.1	See Comparison
NZ_CP111097.1	See Comparison
NZ_CP038406.1	See Comparison
NZ_CP111104.1	See Comparison
NZ_CP140517.1	See Comparison
NZ_CP038314.1	See Comparison
NZ_CP038343.1	See Comparison
NZ_CP038410.1	See Comparison
NZ_CP038373.1	See Comparison
NZ_CP038359.1	See Comparison
NZ_CP038364.1	See Comparison
NZ_CP038327.1	See Comparison
NZ_CP064169.1	See Comparison
NZ_CP038352.1	See Comparison
NZ_CP038350.1	See Comparison
NZ_CP038323.1	See Comparison
NZ_AP018692.1	See Comparison
NZ_CP034385.1	See Comparison
NZ_CP038495.1	See Comparison
NZ_CP038497.1	See Comparison
CP051835.1	See Comparison
CP051832.1	See Comparison
CP051829.1	See Comparison
CP051826.1	See Comparison
NZ_CP038429.1	See Comparison
CP041748.1	See Comparison
CP051805.1	See Comparison
NZ_CP066760.1	See Comparison
NZ_CP066757.1	See Comparison
NZ_CP062161.1	See Comparison
NZ_CP103865.1	See Comparison
NZ_CP104640.1	See Comparison
NZ_CP120945.1	See Comparison
NZ_CP104310.1	See Comparison
NZ_CP012803.1	See Comparison
NZ_CP017670.1	See Comparison
NZ_CP017252.1	See Comparison
NZ_CP017250.1	See Comparison
NZ_CP017445.1	See Comparison
NZ_CP017441.1	See Comparison
NZ_CP064384.1	See Comparison
CP090859.1	See Comparison
CP090861.1	See Comparison
NZ_CP089271.1	See Comparison
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NZ_CP015022.1	See Comparison
NZ_CP008958.1	See Comparison
NC_019041.1	See Comparison
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NZ_CP032806.1	See Comparison
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NZ_CP044144.1	See Comparison
NZ_CP044139.1	See Comparison
NZ_CP044146.1	See Comparison
NZ_CP040571.1	See Comparison
NZ_CP028697.1	See Comparison
NZ_CP028699.1	See Comparison
NZ_CP028694.1	See Comparison
NZ_CP028689.1	See Comparison
NZ_CP028686.1	See Comparison
NZ_CP028692.1	See Comparison
NZ_CP028701.1	See Comparison
NZ_CP028684.1	See Comparison
NZ_CP034805.1	See Comparison
NZ_CP034807.1	See Comparison
NZ_CP028608.1	See Comparison
NZ_CP028653.1	See Comparison
NZ_CP028651.1	See Comparison
NZ_CP028655.1	See Comparison
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NZ_CP018626.1	See Comparison
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NZ_CP022688.1	See Comparison
AB011549.2	See Comparison
NZ_CP133127.1	See Comparison
NZ_CP136756.1	See Comparison
NZ_CP133132.1	See Comparison
NZ_CP133121.1	See Comparison
NZ_CP133129.1	See Comparison
NZ_CP133125.1	See Comparison
CP133123.1	See Comparison
NZ_CP124743.1	See Comparison
NZ_CP132296.1	See Comparison
NZ_CP132299.1	See Comparison
CP126905.1	See Comparison
NZ_CP149467.1	See Comparison
NZ_CP148320.1	See Comparison
NZ_CP145943.1	See Comparison
NZ_CP111097.1	See Comparison
NZ_CP143967.1	See Comparison
NZ_CP143969.1	See Comparison
NZ_CP143965.1	See Comparison
NZ_CP038406.1	See Comparison
NZ_CP111104.1	See Comparison
NZ_CP140517.1	See Comparison
NZ_CP038410.1	See Comparison
NZ_CP038373.1	See Comparison
NZ_CP038359.1	See Comparison
NZ_CP038314.1	See Comparison
NZ_CP038429.1	See Comparison
NZ_CP038364.1	See Comparison
NZ_CP038343.1	See Comparison
NZ_CP038352.1	See Comparison
NZ_CP038350.1	See Comparison
NZ_CP038323.1	See Comparison
NZ_CP038327.1	See Comparison
CP041748.1	See Comparison
NZ_AP018692.1	See Comparison
NZ_CP034385.1	See Comparison
CP051805.1	See Comparison
NZ_CP038495.1	See Comparison
NZ_CP038497.1	See Comparison
NZ_CP066760.1	See Comparison
CP051835.1	See Comparison
CP051832.1	See Comparison
CP051829.1	See Comparison
CP051826.1	See Comparison
NZ_CP066757.1	See Comparison
NZ_CP064169.1	See Comparison
NZ_CP062161.1	See Comparison
NZ_CP103865.1	See Comparison
NZ_CP120945.1	See Comparison
NZ_CP104640.1	See Comparison
NZ_CP104310.1	See Comparison
NZ_CP012803.1	See Comparison
CP090859.1	See Comparison
CP090861.1	See Comparison
NZ_CP089271.1	See Comparison
NZ_CP089033.1	See Comparison
NZ_CP089035.1	See Comparison
NZ_CP015022.1	See Comparison
NZ_CP064384.1	See Comparison
NZ_CP017670.1	See Comparison
NZ_CP017252.1	See Comparison
NZ_CP017250.1	See Comparison
NZ_CP017445.1	See Comparison
NZ_CP017441.1	See Comparison
NC_017907.1	See Comparison
NZ_CP008958.1	See Comparison
NC_019041.1	See Comparison
NZ_CP028697.1	See Comparison
NZ_CP032806.1	See Comparison
NZ_CP032798.1	See Comparison
NZ_CP044144.1	See Comparison
NZ_CP044139.1	See Comparison
NZ_CP044146.1	See Comparison
NZ_CP040571.1	See Comparison
NZ_CP028699.1	See Comparison
NZ_CP028694.1	See Comparison
NZ_CP028689.1	See Comparison
NZ_CP028686.1	See Comparison
NZ_CP028692.1	See Comparison
NZ_CP028701.1	See Comparison
NZ_CP028684.1	See Comparison
NZ_CP034807.1	See Comparison
NZ_CP028608.1	See Comparison
NZ_CP028653.1	See Comparison
NZ_CP028651.1	See Comparison
NZ_CP028655.1	See Comparison
NZ_CP028612.1	See Comparison
NZ_CP031914.1	See Comparison
NZ_CP136756.1	See Comparison
NZ_CP034805.1	See Comparison
NC_002128.1	See Comparison
AB011549.2	See Comparison
NZ_CP022688.1	See Comparison
NZ_CP018626.1	See Comparison
CP126905.1	See Comparison
NZ_CP132296.1	See Comparison
NZ_CP132299.1	See Comparison
NZ_CP133127.1	See Comparison
NZ_CP133132.1	See Comparison
NZ_CP133121.1	See Comparison
NZ_CP133129.1	See Comparison
NZ_CP133125.1	See Comparison
CP133123.1	See Comparison
NZ_CP143967.1	See Comparison
NZ_CP124743.1	See Comparison
NZ_CP149467.1	See Comparison
NZ_CP148320.1	See Comparison
NZ_CP145943.1	See Comparison
NZ_CP143969.1	See Comparison
NZ_CP140517.1	See Comparison
NZ_CP111104.1	See Comparison
NZ_CP143965.1	See Comparison
NZ_CP111097.1	See Comparison
NZ_CP038410.1	See Comparison
NZ_CP038364.1	See Comparison
NZ_CP038352.1	See Comparison
NZ_CP038350.1	See Comparison
NZ_CP038323.1	See Comparison
NZ_CP038314.1	See Comparison
NZ_CP038373.1	See Comparison
NZ_CP038343.1	See Comparison
NZ_CP038359.1	See Comparison
NZ_CP038327.1	See Comparison
NZ_CP038429.1	See Comparison
NZ_CP038406.1	See Comparison
NZ_CP064169.1	See Comparison
CP041748.1	See Comparison
CP051805.1	See Comparison
NZ_CP066760.1	See Comparison
NZ_CP066757.1	See Comparison
NZ_AP018692.1	See Comparison
NZ_CP034385.1	See Comparison
NZ_CP038495.1	See Comparison
NZ_CP038497.1	See Comparison
CP051835.1	See Comparison
CP051832.1	See Comparison
CP051829.1	See Comparison
CP051826.1	See Comparison
NZ_CP062161.1	See Comparison
NZ_CP120945.1	See Comparison
NZ_CP089035.1	See Comparison
CP090859.1	See Comparison
CP090861.1	See Comparison
NZ_CP089271.1	See Comparison
NZ_CP104640.1	See Comparison
NZ_CP103865.1	See Comparison
NZ_CP104310.1	See Comparison
NZ_CP064384.1	See Comparison
NZ_CP015022.1	See Comparison
NZ_CP089033.1	See Comparison
NZ_CP017670.1	See Comparison
NZ_CP017252.1	See Comparison
NZ_CP017250.1	See Comparison
NZ_CP017445.1	See Comparison
NZ_CP017441.1	See Comparison
NZ_CP012803.1	See Comparison
NZ_CP008958.1	See Comparison
NC_019041.1	See Comparison
NC_017907.1	See Comparison
NZ_CP032806.1	See Comparison
NZ_CP032798.1	See Comparison
NZ_CP044144.1	See Comparison
NZ_CP044139.1	See Comparison
NZ_CP044146.1	See Comparison
NZ_CP040571.1	See Comparison
NZ_CP031914.1	See Comparison
NZ_CP028697.1	See Comparison
NZ_CP028699.1	See Comparison
NZ_CP028694.1	See Comparison
NZ_CP028689.1	See Comparison
NZ_CP028686.1	See Comparison
NZ_CP028692.1	See Comparison
NZ_CP028701.1	See Comparison
NZ_CP028684.1	See Comparison
NZ_CP028608.1	See Comparison
NZ_CP028653.1	See Comparison
NZ_CP028651.1	See Comparison
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NZ_CP136756.1	See Comparison
NZ_CP133127.1	See Comparison
NZ_CP133132.1	See Comparison
NZ_CP133121.1	See Comparison
NZ_CP133129.1	See Comparison
NZ_CP133125.1	See Comparison
CP133123.1	See Comparison
NZ_CP132299.1	See Comparison
NZ_CP149467.1	See Comparison
NZ_CP124743.1	See Comparison
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NZ_CP148320.1	See Comparison
NZ_CP143965.1	See Comparison
NZ_CP145943.1	See Comparison
NZ_CP143967.1	See Comparison
NZ_CP143969.1	See Comparison
NZ_CP140517.1	See Comparison
NZ_CP111097.1	See Comparison
NZ_CP111104.1	See Comparison
NZ_CP038314.1	See Comparison
NZ_CP038343.1	See Comparison
NZ_CP038410.1	See Comparison
NZ_CP038373.1	See Comparison
NZ_CP038359.1	See Comparison
NZ_CP038352.1	See Comparison
NZ_CP038350.1	See Comparison
NZ_CP038323.1	See Comparison
NZ_CP038327.1	See Comparison
NZ_CP038429.1	See Comparison
NZ_CP038364.1	See Comparison
NZ_CP038406.1	See Comparison
NZ_CP064169.1	See Comparison
CP041748.1	See Comparison
CP051805.1	See Comparison
NZ_CP066760.1	See Comparison
NZ_CP066757.1	See Comparison
NZ_AP018692.1	See Comparison
NZ_CP034385.1	See Comparison
NZ_CP038495.1	See Comparison
NZ_CP038497.1	See Comparison
CP051835.1	See Comparison
CP051832.1	See Comparison
CP051829.1	See Comparison
CP051826.1	See Comparison
NZ_CP062161.1	See Comparison
NZ_CP120945.1	See Comparison
NZ_CP104640.1	See Comparison
CP090859.1	See Comparison
NZ_CP064384.1	See Comparison
NZ_CP103865.1	See Comparison
NZ_CP104310.1	See Comparison
CP090861.1	See Comparison
NZ_CP089271.1	See Comparison
NZ_CP089035.1	See Comparison
NZ_CP015022.1	See Comparison
NZ_CP017252.1	See Comparison
NZ_CP017250.1	See Comparison
NZ_CP017445.1	See Comparison
NZ_CP017441.1	See Comparison
NZ_CP089033.1	See Comparison
NZ_CP017670.1	See Comparison
NZ_CP012803.1	See Comparison
NZ_CP008958.1	See Comparison
NC_019041.1	See Comparison
NC_017907.1	See Comparison
NZ_CP032806.1	See Comparison
NZ_CP032798.1	See Comparison
NZ_CP044144.1	See Comparison
NZ_CP044139.1	See Comparison
NZ_CP044146.1	See Comparison
NZ_CP040571.1	See Comparison
NZ_CP028697.1	See Comparison
NZ_CP028699.1	See Comparison
NZ_CP028694.1	See Comparison
NZ_CP028689.1	See Comparison
NZ_CP028686.1	See Comparison
NZ_CP028692.1	See Comparison
NZ_CP028701.1	See Comparison
NZ_CP028684.1	See Comparison
NZ_CP034805.1	See Comparison
NZ_CP031914.1	See Comparison
NZ_CP028608.1	See Comparison
NZ_CP028653.1	See Comparison
NZ_CP028651.1	See Comparison
NZ_CP028655.1	See Comparison
NZ_CP028612.1	See Comparison
NZ_CP034807.1	See Comparison
NC_002128.1	See Comparison
NZ_CP022688.1	See Comparison
NZ_CP018626.1	See Comparison
AB011549.2	See Comparison
NZ_CP133127.1	See Comparison
NZ_CP136756.1	See Comparison
NZ_CP101523.1	See Comparison
NZ_CP133132.1	See Comparison
NZ_CP133121.1	See Comparison
NZ_CP133129.1	See Comparison
NZ_CP133125.1	See Comparison
CP133123.1	See Comparison
NZ_CP124743.1	See Comparison
CP126905.1	See Comparison
NZ_CP132296.1	See Comparison
NZ_CP132299.1	See Comparison
NZ_CP149467.1	See Comparison
NZ_CP148320.1	See Comparison
NZ_CP145943.1	See Comparison
NZ_CP143967.1	See Comparison
NZ_CP143969.1	See Comparison
NZ_CP111104.1	See Comparison
NZ_CP143965.1	See Comparison
NZ_CP111097.1	See Comparison
NZ_CP140517.1	See Comparison
NZ_AP018692.1	See Comparison
NZ_CP038343.1	See Comparison
NZ_CP038327.1	See Comparison
NZ_CP038364.1	See Comparison
NZ_CP038352.1	See Comparison
NZ_CP038350.1	See Comparison
NZ_CP038323.1	See Comparison
NZ_CP038410.1	See Comparison
NZ_CP038373.1	See Comparison
NZ_CP038359.1	See Comparison
NZ_CP038429.1	See Comparison
NZ_CP038406.1	See Comparison
NZ_CP038314.1	See Comparison
NZ_CP034385.1	See Comparison
NZ_CP038495.1	See Comparison
CP041748.1	See Comparison
NZ_CP038497.1	See Comparison
NZ_CP104640.1	See Comparison
CP051835.1	See Comparison
CP051832.1	See Comparison
CP051829.1	See Comparison
CP051826.1	See Comparison
CP051805.1	See Comparison
NZ_CP064169.1	See Comparison
NZ_CP062161.1	See Comparison
NZ_CP066760.1	See Comparison
NZ_CP066757.1	See Comparison
NZ_CP120945.1	See Comparison
NZ_CP089033.1	See Comparison
NZ_CP103865.1	See Comparison
NZ_CP104310.1	See Comparison
NZ_CP064384.1	See Comparison
CP090859.1	See Comparison
CP090861.1	See Comparison
NZ_CP089271.1	See Comparison
NZ_CP089035.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore