Plasmid NZ_CP070591.1

Sequence

Nucleotide Information

Accession NZ_CP070591.1
Description Escherichia coli strain ESC53083 plasmid p53083_2, complete sequence
Source refseq
Topology circular
Length 4087 bp
GC Content 0.50 %
Created at NCBI Feb. 26, 2021



Assembly

Genome Data Information

Accession GCF_016939795.1
Assembly Coverage 250


Biosample

Curated Collection Information
Accession 16933302

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 50.21N;15.82E
Original Query Type coordinates
Coordinates (Lat/Lon) 50.21/15.82
Address 805/39, Střelecká, Střelecká-západ, Hradec Králové, okres Hradec Králové, Královéhradecký kraj, Northeast, 500 02, Czechia

ECOSYSTEM
Original Query Homo sapiens,stool
Classification fecal,gastrointestinal_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query Acute respiratory failure
DOID/SYMP
  • Respiratory failure (DOID:11162 )
    • A lung disease characterized by inadequate gas exchange by the respiratory system.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP091760.1 See Comparison
CP082460.1 See Comparison
NZ_CP018966.1 See Comparison
NZ_CP010878.1 See Comparison
NZ_CP023832.1 See Comparison
NZ_OZ040271.1 See Comparison
NZ_CP135704.1 See Comparison
NZ_CP128949.1 See Comparison
NZ_CP128911.1 See Comparison
NZ_CP128891.1 See Comparison
NZ_CP124458.1 See Comparison
NZ_OZ039050.1 See Comparison
NZ_CP147530.1 See Comparison
NZ_CP147527.1 See Comparison
NZ_CP145147.1 See Comparison
NZ_MN689939.1 See Comparison
NZ_AP027839.1 See Comparison
NZ_LC438464.1 See Comparison
NZ_CP069562.1 See Comparison
NZ_AP022035.1 See Comparison
NZ_AP022002.1 See Comparison
NZ_CP023832.1 See Comparison
NZ_CP116150.1 See Comparison
NZ_CP116186.1 See Comparison
NZ_CP091760.1 See Comparison
NZ_CP010878.1 See Comparison
AP026486.1 See Comparison
AP026482.1 See Comparison
NZ_OX030706.1 See Comparison
CP082460.1 See Comparison
NZ_CP018966.1 See Comparison
NZ_LC438464.1 See Comparison
NZ_CP135704.1 See Comparison
NZ_CP128949.1 See Comparison
NZ_CP128911.1 See Comparison
NZ_CP128891.1 See Comparison
NZ_CP124458.1 See Comparison
NZ_CP147527.1 See Comparison
NZ_AP027839.1 See Comparison
NZ_OZ040271.1 See Comparison
NZ_OZ039050.1 See Comparison
NZ_CP147530.1 See Comparison
NZ_CP145147.1 See Comparison
NZ_CP069562.1 See Comparison
CP082460.1 See Comparison
NZ_AP022035.1 See Comparison
NZ_AP022002.1 See Comparison
NZ_CP116150.1 See Comparison
NZ_CP116186.1 See Comparison
NZ_MN689939.1 See Comparison
AP026486.1 See Comparison
AP026482.1 See Comparison
NZ_OX030706.1 See Comparison
NZ_CP091760.1 See Comparison
NZ_CP018966.1 See Comparison
NZ_CP147530.1 See Comparison
NZ_CP023832.1 See Comparison
NZ_CP010878.1 See Comparison
NZ_CP135704.1 See Comparison
NZ_CP128949.1 See Comparison
NZ_CP128911.1 See Comparison
NZ_CP128891.1 See Comparison
NZ_CP124458.1 See Comparison
NZ_OZ040271.1 See Comparison
NZ_OZ039050.1 See Comparison
NZ_CP147527.1 See Comparison
NZ_LC438464.1 See Comparison
NZ_CP145147.1 See Comparison
NZ_AP027839.1 See Comparison
NZ_CP069562.1 See Comparison
NZ_CP070591.1 See Comparison
NZ_CP091760.1 See Comparison
NZ_MN689939.1 See Comparison
NZ_CP116186.1 See Comparison
AP026486.1 See Comparison
AP026482.1 See Comparison
NZ_AP022035.1 See Comparison
NZ_AP022002.1 See Comparison
NZ_CP116150.1 See Comparison
NZ_OX030706.1 See Comparison
CP082460.1 See Comparison
NZ_CP010878.1 See Comparison
NZ_CP018966.1 See Comparison
NZ_CP147530.1 See Comparison
NZ_CP124458.1 See Comparison
NZ_CP023832.1 See Comparison
NZ_CP135704.1 See Comparison
NZ_CP128949.1 See Comparison
NZ_CP128911.1 See Comparison
NZ_CP128891.1 See Comparison
NZ_OZ040271.1 See Comparison
NZ_OZ039050.1 See Comparison
NZ_CP147527.1 See Comparison
NZ_AP027839.1 See Comparison
NZ_CP145147.1 See Comparison
NZ_AP022035.1 See Comparison
NZ_CP069562.1 See Comparison
NZ_LC438464.1 See Comparison
NZ_MN689939.1 See Comparison
NZ_AP022002.1 See Comparison
NZ_CP116150.1 See Comparison
NZ_CP116186.1 See Comparison
AP026486.1 See Comparison
AP026482.1 See Comparison
NZ_CP091760.1 See Comparison
NZ_OX030706.1 See Comparison
NZ_CP010878.1 See Comparison
CP082460.1 See Comparison
NZ_CP018966.1 See Comparison
NZ_CP023832.1 See Comparison
NZ_CP135704.1 See Comparison
NZ_CP128911.1 See Comparison
NZ_CP128891.1 See Comparison
NZ_LC438464.1 See Comparison
NZ_CP128949.1 See Comparison
NZ_CP124458.1 See Comparison
NZ_CP147530.1 See Comparison
NZ_CP147527.1 See Comparison
NZ_AP027839.1 See Comparison
NZ_OZ040271.1 See Comparison
NZ_OZ039050.1 See Comparison
NZ_CP145147.1 See Comparison
NZ_MN689939.1 See Comparison
NZ_CP069562.1 See Comparison
NZ_OX030706.1 See Comparison
NZ_AP022035.1 See Comparison
NZ_AP022002.1 See Comparison
NZ_CP116150.1 See Comparison
NZ_CP116186.1 See Comparison
AP026486.1 See Comparison
AP026482.1 See Comparison
NZ_CP018966.1 See Comparison
NZ_CP091760.1 See Comparison
CP082460.1 See Comparison
NZ_CP135704.1 See Comparison
NZ_CP010878.1 See Comparison
NZ_CP023832.1 See Comparison
NZ_MN689939.1 See Comparison
NZ_OZ040271.1 See Comparison
NZ_OZ039050.1 See Comparison
NZ_CP147530.1 See Comparison
NZ_CP147527.1 See Comparison
NZ_AP027839.1 See Comparison
NZ_CP128949.1 See Comparison
NZ_CP128911.1 See Comparison
NZ_CP128891.1 See Comparison
NZ_CP124458.1 See Comparison
NZ_CP145147.1 See Comparison
NZ_LC438464.1 See Comparison
NZ_CP069562.1 See Comparison
NZ_CP116150.1 See Comparison
NZ_AP022002.1 See Comparison
NZ_AP022035.1 See Comparison
NZ_OX030706.1 See Comparison
NZ_CP116186.1 See Comparison
AP026486.1 See Comparison
AP026482.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore