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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP069472.1
Sequence
Nucleotide Information
Accession
NZ_CP069472.1
Description
Staphylococcus aureus strain FDAARGOS_1246 plasmid unnamed2, complete sequence
Source
refseq
Topology
circular
Length
3125 bp
GC Content
0.29 %
Created at NCBI
Feb. 16, 2021
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Staphylococcus aureus (1280)
Lineage
Superkingdom
Bacteria (2)
Phylum
Bacillota (1239)
Class
Bacilli (91061)
Order
Bacillales (1385)
Family
Staphylococcaceae (90964)
Genus
Staphylococcus (1279)
Species
Staphylococcus_aureus (1280)
Strain
Assembly
Genome Data Information
Accession
GCF_016889145.1
Assembly Coverage
2103.49
Biosample
Curated Collection Information
Accession
16357388
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
USA,MD
Original Query Type
name
Coordinates (Lat/Lon)
39.52/-76.94
Address
USA,MD
ECOSYSTEM
Original Query
None
Classification
None
Host-associated Taxon
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_CP069471.1
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based on Mash distance
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CP030577.1
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NZ_LR130520.1
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NZ_CP014369.1
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NZ_CP014385.1
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NZ_CP014377.1
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NZ_CP029676.1
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NZ_CP025482.1
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NZ_CP025489.1
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NZ_CP025490.1
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NZ_CP025487.1
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NZ_CP025488.1
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NZ_CP025496.1
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NZ_CP129359.1
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NZ_CP120124.1
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CP157208.1
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NZ_CP136531.1
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CP156703.1
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NZ_CP125869.1
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CP152318.1
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CP152321.1
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CP152324.1
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CP151889.1
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CP154292.1
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CP154381.1
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CP154281.1
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NZ_CP151119.1
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CP154287.1
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CP151825.1
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NZ_CP131651.1
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CP151576.1
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CP151580.1
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CP151573.1
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CP151564.1
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NZ_CP148083.1
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CP150105.1
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NZ_CP149808.1
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NZ_CP147690.1
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CP150111.1
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NZ_CP002150.1
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NZ_CP120046.1
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NC_013295.1
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NZ_CP043388.1
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NZ_CP120110.1
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NZ_CP120184.1
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NZ_CP002133.1
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NZ_CP120055.1
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NZ_CP002150.1
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NZ_CP002140.1
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NZ_CP002142.1
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NZ_CP055226.1
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NZ_CP069479.1
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NZ_CP069536.1
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NZ_CP062333.1
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NZ_CP099578.1
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NZ_CP103849.1
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NZ_CP062460.1
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NZ_CP062440.1
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NZ_CP062316.1
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NZ_CP081356.1
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NZ_CP092054.1
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NZ_CP080559.1
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NZ_CP014427.1
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NZ_CP014424.1
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NZ_CP014430.1
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NZ_CP014413.1
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NZ_CP014410.1
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NZ_CP014433.1
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NZ_CP014393.1
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NZ_CP014398.1
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NZ_CP014421.1
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NZ_CP014442.1
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NC_018975.1
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NC_018958.1
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NC_012417.1
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NC_013300.1
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NC_007790.1
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NC_013297.1
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NC_013295.1
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CP030486.1
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CP030577.1
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NZ_LR130520.1
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NZ_CP043394.1
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NZ_CP043388.1
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CP030417.1
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NZ_CP025489.1
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NZ_CP014372.1
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NZ_CP014369.1
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NZ_CP014366.1
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NZ_CP014388.1
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NZ_CP014385.1
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NZ_CP014377.1
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NZ_CP014363.1
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NZ_CP029668.1
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NZ_CP025488.1
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CP152326.1
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CP154281.1
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CP151564.1
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NZ_CP148083.1
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CP150105.1
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NZ_CP120081.1
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NZ_CP120172.1
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NZ_CP120092.1
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NZ_CP120110.1
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NZ_CP120154.1
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NZ_CP120184.1
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NZ_CP120046.1
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NZ_CP002142.1
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NZ_CP120055.1
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NZ_CP002150.1
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NZ_CP002140.1
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NZ_CP055226.1
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NZ_CP069479.1
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NZ_CP062460.1
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NZ_CP014410.1
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NZ_CP014433.1
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CP152321.1
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NZ_CP120120.1
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NZ_CP120081.1
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NZ_CP120176.1
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NZ_CP120172.1
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NZ_CP120154.1
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NZ_CP120184.1
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NZ_CP120046.1
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NZ_CP120092.1
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NZ_CP120110.1
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NZ_CP055226.1
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NZ_CP120055.1
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NZ_CP002150.1
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NZ_CP002133.1
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NZ_CP002142.1
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NZ_CP069479.1
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NZ_CP069536.1
See Comparison
NZ_CP062460.1
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NZ_CP103849.1
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NZ_CP099578.1
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NZ_CP092054.1
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NZ_CP062440.1
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NZ_CP062333.1
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NZ_CP062316.1
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NZ_CP007178.1
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NZ_CP014430.1
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NZ_CP014413.1
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NZ_CP014393.1
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NZ_CP014436.1
See Comparison
NZ_CP014421.1
See Comparison
NZ_CP014403.1
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NZ_CP014442.1
See Comparison
NZ_CP014439.1
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NZ_CP014427.1
See Comparison
NZ_CP014424.1
See Comparison
NC_018958.1
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NZ_CP081356.1
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NZ_CP080559.1
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NZ_CP014410.1
See Comparison
NZ_CP014433.1
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NZ_CP014398.1
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NZ_CP009424.1
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NC_012417.1
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NC_018975.1
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NC_018960.1
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NC_007790.1
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NC_013300.1
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NC_013297.1
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NC_013295.1
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CP030577.1
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CP030515.1
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CP030486.1
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NZ_CP043391.1
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CP030417.1
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NZ_CP043394.1
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NZ_CP043388.1
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NZ_CP014382.1
See Comparison
NZ_LR130520.1
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NZ_CP035370.1
See Comparison
NZ_CP014366.1
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NZ_CP014388.1
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NZ_CP014385.1
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NZ_CP014377.1
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NZ_CP129354.1
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NZ_CP025489.1
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NZ_CP025486.1
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NZ_CP025490.1
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NZ_CP025487.1
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NZ_CP025488.1
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NZ_CP014363.1
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NZ_CP014372.1
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NZ_CP014369.1
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NZ_CP029668.1
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NZ_CP029676.1
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NZ_CP025482.1
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NZ_CP025496.1
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NZ_CP129359.1
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NZ_CP120124.1
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NZ_CP136527.1
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NZ_CP136531.1
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CP157208.1
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CP156703.1
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NZ_CP152410.1
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CP154292.1
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NZ_CP152121.1
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CP152326.1
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CP152318.1
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CP152321.1
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CP152324.1
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CP154381.1
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CP154281.1
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CP154287.1
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NZ_CP131651.1
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CP151576.1
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CP151825.1
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NZ_CP151119.1
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CP151580.1
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CP151573.1
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CP151564.1
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NZ_CP149808.1
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NZ_CP149460.1
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NZ_CP148083.1
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NZ_CP150659.1
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NZ_CP147701.1
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NZ_CP148078.1
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NZ_CP147690.1
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CP150105.1
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CP150111.1
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NZ_CP120049.1
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NZ_CP120172.1
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NZ_CP120154.1
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NZ_CP120184.1
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NZ_CP120046.1
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NZ_CP120092.1
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NZ_CP120110.1
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NZ_CP120072.1
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NZ_CP120136.1
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NZ_CP120203.1
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NZ_CP120019.1
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NZ_CP120169.1
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NZ_CP120098.1
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NZ_CP120120.1
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NZ_CP120081.1
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NZ_CP120055.1
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NZ_CP120176.1
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NZ_CP002133.1
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NZ_CP002150.1
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NZ_CP002140.1
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NZ_CP002142.1
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NZ_CP069479.1
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NZ_CP069536.1
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NZ_CP069472.1
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NZ_CP055226.1
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NZ_CP062440.1
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NZ_CP103849.1
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NZ_CP062460.1
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NZ_CP099578.1
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NZ_CP062333.1
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NZ_CP062316.1
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NZ_CP014424.1
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NZ_CP081356.1
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NZ_CP080559.1
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NZ_CP092054.1
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NZ_CP014410.1
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NZ_CP014433.1
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NZ_CP014398.1
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NZ_CP009424.1
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NZ_CP014430.1
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NZ_CP014413.1
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NZ_CP014393.1
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NZ_CP014436.1
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NZ_CP014421.1
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NZ_CP014403.1
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NC_007790.1
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NZ_CP014442.1
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NZ_CP014439.1
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NZ_CP014427.1
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NZ_CP007178.1
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NC_018960.1
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NC_018958.1
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NC_013300.1
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NC_013297.1
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NC_013295.1
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NC_012417.1
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CP030577.1
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CP030515.1
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CP030486.1
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NZ_CP043391.1
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CP030417.1
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NC_018975.1
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NZ_CP043394.1
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NZ_CP043388.1
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NZ_CP035370.1
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NZ_LR130520.1
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NZ_CP025489.1
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NZ_CP014363.1
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NZ_CP014372.1
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NZ_CP014369.1
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NZ_CP014382.1
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NZ_CP014366.1
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NZ_CP014388.1
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NZ_CP014385.1
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NZ_CP014377.1
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NZ_CP029668.1
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NZ_CP029676.1
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NZ_CP025482.1
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NZ_CP025486.1
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NZ_CP025490.1
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NZ_CP025487.1
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NZ_CP025488.1
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NZ_CP120124.1
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NZ_CP025496.1
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CP157208.1
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NZ_CP129354.1
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NZ_CP129359.1
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NZ_CP136527.1
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NZ_CP136531.1
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CP156703.1
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NZ_CP152121.1
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CP154287.1
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NZ_CP152410.1
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NZ_CP125869.1
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CP154292.1
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CP154381.1
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CP154281.1
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CP152326.1
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CP151825.1
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CP152318.1
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CP152321.1
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CP152324.1
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CP151889.1
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NZ_CP131651.1
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NZ_CP151119.1
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NZ_CP148083.1
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CP151576.1
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CP151580.1
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CP151573.1
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CP151564.1
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NZ_CP149460.1
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NZ_CP149808.1
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NZ_CP150659.1
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NZ_CP148078.1
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NZ_CP147701.1
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CP150105.1
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NZ_CP147690.1
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CP150111.1
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NZ_CP120049.1
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NZ_CP120081.1
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NZ_CP120176.1
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NZ_CP120172.1
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NZ_CP120154.1
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NZ_CP120072.1
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NZ_CP120184.1
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NZ_CP120136.1
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NZ_CP120046.1
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NZ_CP120203.1
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NZ_CP120092.1
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NZ_CP120110.1
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NZ_CP120019.1
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NZ_CP120169.1
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NZ_CP120098.1
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NZ_CP120120.1
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NZ_CP002150.1
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NZ_CP120055.1
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NZ_CP002140.1
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NZ_CP002133.1
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NZ_CP002142.1
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NZ_CP062440.1
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NZ_CP055226.1
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NZ_CP103849.1
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NZ_CP069479.1
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NZ_CP069536.1
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NZ_CP099578.1
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NZ_CP062460.1
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NZ_CP062333.1
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NZ_CP062316.1
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NZ_CP081356.1
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NZ_CP092054.1
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NZ_CP080559.1
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NZ_CP014413.1
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NZ_CP009424.1
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NZ_CP014393.1
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NZ_CP014436.1
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NZ_CP014421.1
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NZ_CP014403.1
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NZ_CP014442.1
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NZ_CP014439.1
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NZ_CP014427.1
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NZ_CP014430.1
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NZ_CP014424.1
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NZ_CP014410.1
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NZ_CP014433.1
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NZ_CP014398.1
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NC_007790.1
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NZ_CP007178.1
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NC_013300.1
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NC_013297.1
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NC_013295.1
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NC_018975.1
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NC_018960.1
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NC_018958.1
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CP030417.1
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NC_012417.1
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CP030577.1
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CP030515.1
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NZ_CP035370.1
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CP030486.1
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NZ_CP043391.1
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NZ_CP043394.1
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NZ_CP043388.1
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NZ_CP029668.1
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NZ_CP014363.1
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NZ_CP014372.1
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NZ_CP014369.1
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NZ_CP014382.1
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NZ_CP014366.1
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NZ_CP014388.1
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NZ_CP014385.1
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NZ_CP014377.1
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NZ_CP029676.1
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NZ_CP025482.1
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NZ_LR130520.1
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NZ_CP025486.1
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NZ_CP025490.1
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NZ_CP025487.1
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NZ_CP025488.1
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NZ_CP025496.1
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NZ_CP025489.1
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NZ_CP152121.1
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CP157208.1
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CP156703.1
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NZ_CP129354.1
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NZ_CP129359.1
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NZ_CP120124.1
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NZ_CP136527.1
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NZ_CP136531.1
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NZ_CP152410.1
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CP151825.1
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CP154292.1
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CP154381.1
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CP154281.1
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CP154287.1
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NZ_CP125869.1
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CP152326.1
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NZ_CP131651.1
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CP152318.1
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CP152321.1
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CP152324.1
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NZ_CP148083.1
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CP151889.1
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NZ_CP151119.1
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CP151576.1
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CP151580.1
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CP151573.1
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CP151564.1
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NZ_CP150659.1
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NZ_CP149808.1
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NZ_CP149460.1
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NZ_CP147701.1
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NZ_CP148078.1
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NZ_CP147690.1
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NZ_CP120049.1
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NZ_CP120172.1
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NZ_CP120154.1
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NZ_CP120184.1
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CP150105.1
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CP150111.1
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NZ_CP120072.1
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NZ_CP120046.1
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NZ_CP120092.1
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NZ_CP120110.1
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NZ_CP120136.1
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NZ_CP120203.1
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NZ_CP120019.1
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NZ_CP120169.1
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NZ_CP120098.1
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NZ_CP120120.1
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NZ_CP120081.1
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NZ_CP120176.1
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NZ_CP099578.1
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NZ_CP120055.1
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NZ_CP002133.1
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NZ_CP002142.1
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NZ_CP069479.1
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NZ_CP069536.1
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NZ_CP055226.1
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NZ_CP002150.1
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NZ_CP002140.1
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NZ_CP103849.1
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Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
Detected typing markers by plasmidfinder
NUCCORE ACC
Typing
Identity
Coverage
Start
End
Strand
HSP length
Template length
Position in ref
Positions in Contig
Note
Accession
Hit id
Organism L1
Organism L2
NUCCORE ACC
Typing
Identity
Coverage
Start
End
Strand
HSP length
Template length
Position in ref
Positions in Contig
Note
Accession
Hit id
Organism L1
Organism L2