PLSDB
v. 2024_05_31_v2
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Typing
Plasmid NZ_CP038422.1
Sequence
Nucleotide Information
Accession
NZ_CP038422.1
Description
Escherichia coli O157:H7 strain 7636 plasmid p7636-1, complete sequence
Source
refseq
Topology
circular
Length
94959 bp
GC Content
0.48 %
Created at NCBI
May 28, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (83334)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Assembly
Genome Data Information
Accession
GCF_013168195.1
Assembly Coverage
328
Biosample
Curated Collection Information
Accession
11229480
PLASMID INFORMATION
BIOSAMPLE_pathotype
STEC
GEOGRAPHICAL INFORMATION
Original Query
USA
Original Query Type
name
Coordinates (Lat/Lon)
39.78/-100.45
Address
USA
ECOSYSTEM
Original Query
bovine
Classification
host_associated
Host-associated Taxon
Bos taurus (
9913
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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CP051823.1
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CP051803.1
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NZ_AP026117.1
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NZ_AP026111.1
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NZ_AP026100.1
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CP088041.1
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CP088045.1
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CP088027.1
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CP088043.1
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CP088029.1
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CP088047.1
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CP088033.1
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CP088049.1
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CP088035.1
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CP088051.1
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CP088037.1
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CP088053.1
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CP088065.1
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CP088055.1
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CP088063.1
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CP088072.1
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CP088039.1
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CP088057.1
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CP088070.1
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CP088059.1
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CP088061.1
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CP088031.1
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NZ_CP076234.1
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NZ_CP076239.1
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NZ_CP076246.1
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NZ_CP076231.1
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NZ_CP076242.1
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NZ_CP076244.1
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NZ_CP076236.1
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CP073592.1
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CP073594.1
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CP073596.1
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CP073598.1
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CP073600.1
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CP073602.1
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CP073605.1
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CP073608.1
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CP073610.1
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CP073615.1
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CP073618.1
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CP073620.1
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NZ_CP018253.1
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NZ_CP018240.1
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NZ_CP018242.1
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NZ_CP018248.1
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NZ_CP018244.1
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NZ_CP018246.1
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NZ_CP018238.1
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NZ_CP018251.1
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NZ_CP017443.1
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NZ_CP032804.1
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NZ_CP032790.1
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CP043023.1
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NZ_CP034793.1
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NZ_CP034800.1
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NZ_CP038426.1
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NZ_CP038379.1
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NZ_CP038382.1
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NZ_CP038418.1
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NZ_CP038283.1
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NZ_CP038424.1
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NZ_CP038362.1
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NZ_CP038341.1
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NZ_CP038320.1
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NZ_CP062750.1
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NZ_CP062772.1
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NZ_CP062762.1
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NZ_CP062724.1
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NZ_CP062745.1
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NZ_CP062714.1
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NZ_CP062701.1
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NZ_CP062783.1
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NZ_CP062740.1
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NZ_CP062779.1
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NZ_CP062728.1
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NZ_CP062734.1
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NZ_CP062718.1
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NZ_CP062726.1
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NZ_CP062706.1
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NZ_CP062716.1
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NZ_CP062781.1
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NZ_CP062730.1
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NZ_CP062722.1
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NZ_CP062720.1
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NZ_CP062712.1
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NZ_CP062709.1
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CP051813.1
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CP051810.1
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CP051839.1
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CP051820.1
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CP051807.1
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CP051818.1
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CP051803.1
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CP051797.1
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CP051795.1
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CP051791.1
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CP051789.1
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CP051785.1
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CP051781.1
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NZ_CP066755.1
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NZ_AP026102.1
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NZ_AP026119.1
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NZ_AP026117.1
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NZ_AP026088.1
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CP088029.1
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CP088037.1
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CP088065.1
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CP088063.1
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CP088070.1
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CP088068.1
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CP088041.1
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CP088045.1
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CP088043.1
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CP088047.1
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CP088049.1
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CP088051.1
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CP088053.1
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CP088055.1
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CP088072.1
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CP088057.1
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CP088059.1
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NZ_CP076244.1
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NZ_CP076236.1
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CP073594.1
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CP073596.1
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CP073598.1
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CP073600.1
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CP073602.1
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CP073605.1
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CP073608.1
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CP073610.1
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CP073615.1
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CP073618.1
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CP073620.1
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NZ_CP017439.1
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CP073592.1
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NZ_CP018253.1
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NZ_CP018240.1
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NZ_CP018242.1
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NZ_CP018248.1
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NZ_CP018244.1
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NZ_CP017435.1
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NZ_CP018246.1
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NZ_CP018238.1
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NZ_CP017443.1
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NZ_CP018251.1
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NZ_CP017437.1
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NZ_CP016626.1
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NZ_CP008806.1
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NZ_CP015816.1
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NC_013010.1
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NZ_CP010305.1
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NC_011350.1
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NZ_CP032812.1
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NZ_CP032804.1
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NZ_CP032790.1
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NZ_CP028658.1
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NZ_CP028670.1
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NZ_CP028673.1
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NZ_CP028643.1
See Comparison
NZ_CP028676.1
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NZ_CP028628.1
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NZ_CP028649.1
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NZ_CP028602.1
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NZ_CP028631.1
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NZ_CP028667.1
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NZ_CP028599.1
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NZ_CP028664.1
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NZ_CP028646.1
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NZ_CP028625.1
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NZ_CP028637.1
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NZ_CP028634.1
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NZ_CP028606.1
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NZ_CP028597.1
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NZ_CP028661.1
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NZ_CP028640.1
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NZ_CP028616.1
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NZ_CP028595.1
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NZ_CP035367.1
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NZ_CP034809.1
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NZ_CP034802.1
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NZ_CP034793.1
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NZ_CP034796.1
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NZ_CP034800.1
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NZ_CP034795.1
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NZ_CP022052.2
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NZ_CP030765.1
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CP126907.1
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NZ_CP015847.2
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NZ_CP015844.2
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NZ_AP026091.1
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NZ_CP145947.1
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NZ_CP145945.1
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NZ_CP140520.1
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CP058232.1
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CP058234.1
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NZ_CP038371.1
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NZ_CP038356.1
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NZ_CP038345.1
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NZ_CP038332.1
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NZ_CP038314.1
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NZ_CP038286.1
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NZ_CP038426.1
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NZ_CP038415.1
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NZ_CP038401.1
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NZ_CP038379.1
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NZ_CP038368.1
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NZ_CP038354.1
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NZ_CP038312.1
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NZ_CP038308.1
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NZ_CP038293.1
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NZ_CP038283.1
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NZ_CP038424.1
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CP034937.1
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NZ_CP046526.1
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NZ_CP045976.1
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NZ_CP035546.1
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NZ_CP040310.1
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NZ_CP040306.1
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NZ_CP040312.1
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NZ_CP040317.1
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NZ_CP040315.1
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NZ_CP040308.1
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NZ_CP062772.1
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CP051823.1
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CP051820.1
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CP051818.1
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CP051815.1
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CP051813.1
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CP051810.1
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CP051839.1
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CP051807.1
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CP051803.1
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CP051801.1
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CP051799.1
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CP051797.1
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CP051795.1
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CP051791.1
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CP051789.1
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CP051785.1
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CP051781.1
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CP051777.1
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NZ_CP066750.1
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NZ_CP066755.1
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NZ_CP114133.1
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NZ_CP111097.1
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NZ_CP111100.1
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NZ_CP111099.1
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NZ_CP039835.1
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NZ_CP040108.1
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NZ_CP038318.1
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NZ_CP038301.1
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NZ_CP038289.1
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NZ_CP038382.1
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NZ_CP038348.1
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NZ_CP038335.1
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NZ_CP038420.1
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NZ_CP038418.1
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NZ_CP038404.1
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NZ_CP038362.1
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NZ_CP038341.1
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NZ_CP038320.1
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NZ_CP038304.1
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NZ_CP038291.1
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NZ_AP026081.1
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NZ_AP026102.1
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NZ_AP026086.1
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NZ_AP026119.1
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NZ_AP026093.1
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NZ_AP026117.1
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NZ_AP026111.1
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NZ_AP026100.1
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NZ_AP026096.1
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NZ_AP026088.1
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NZ_AP026083.1
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NZ_AP026115.1
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NZ_AP026109.1
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NZ_CP076234.1
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NZ_CP082836.1
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NZ_CP104650.1
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NZ_CP104648.1
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NZ_CP104646.1
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NZ_CP089273.1
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NZ_CP089037.1
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CP088043.1
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CP088047.1
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CP088049.1
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CP088051.1
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CP088053.1
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CP088072.1
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CP088061.1
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CP088031.1
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CP088027.1
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CP088029.1
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CP088065.1
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CP088063.1
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CP088039.1
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CP088070.1
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CP088068.1
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CP088041.1
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CP088045.1
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NZ_CP076239.1
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NZ_CP076246.1
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NZ_CP076231.1
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NZ_CP076242.1
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NZ_CP076244.1
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NZ_CP076236.1
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CP073598.1
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CP073600.1
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CP073602.1
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CP073605.1
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CP073608.1
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CP073610.1
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CP073615.1
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CP073618.1
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CP073620.1
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NZ_CP015816.1
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CP073592.1
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CP073594.1
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CP073596.1
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NZ_CP017439.1
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NZ_CP017435.1
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NZ_CP017443.1
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NZ_CP017447.1
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NZ_CP017437.1
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NZ_CP018253.1
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NZ_CP018240.1
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NZ_CP018242.1
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NZ_CP018248.1
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NZ_CP018244.1
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NZ_CP018246.1
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NZ_CP018238.1
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NZ_CP018251.1
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NZ_CP008806.1
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NZ_CP010305.1
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NZ_CP016626.1
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NZ_CP032809.1
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NC_011350.1
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NZ_CP032794.1
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NC_013010.1
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NZ_CP032812.1
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NZ_CP032804.1
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NZ_CP032802.1
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NZ_CP032796.1
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NZ_CP032790.1
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NZ_CP111097.1
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NZ_CP015854.1
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NZ_CP028679.1
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NZ_CP028682.1
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NZ_CP028658.1
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NZ_CP028619.1
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NZ_CP028670.1
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NZ_CP028643.1
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NZ_CP028628.1
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NZ_CP028602.1
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NZ_CP028667.1
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NZ_CP028664.1
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NZ_CP028625.1
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NZ_CP028622.1
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NZ_CP034793.1
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NZ_CP030765.1
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CP043020.1
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CP043012.1
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CP043023.1
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CP043016.1
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NZ_CP040573.1
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NZ_CP028673.1
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NZ_CP028676.1
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NZ_CP028649.1
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NZ_CP028631.1
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NZ_CP028599.1
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NZ_CP028646.1
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NZ_CP028637.1
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NZ_CP028634.1
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NZ_CP028606.1
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NZ_CP028597.1
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NZ_CP028661.1
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NZ_CP028640.1
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NZ_CP028616.1
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NZ_CP028595.1
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NZ_CP035367.1
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NZ_CP034809.1
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NZ_CP034796.1
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NZ_CP034800.1
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NZ_CP034795.1
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NZ_CP034802.1
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NZ_CP022052.2
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NZ_CP015847.2
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NZ_CP015844.2
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CP126907.1
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NZ_CP145947.1
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NZ_CP145945.1
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NZ_CP111100.1
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NZ_CP140520.1
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NZ_CP111099.1
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NZ_CP039835.1
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CP058232.1
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CP058234.1
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NZ_CP040108.1
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NZ_CP038356.1
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NZ_CP038345.1
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NZ_CP038332.1
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NZ_CP038318.1
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NZ_CP038301.1
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NZ_CP038314.1
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NZ_CP038289.1
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NZ_CP038286.1
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NZ_CP038426.1
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NZ_CP038382.1
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NZ_CP038362.1
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NZ_CP038415.1
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NZ_CP038401.1
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NZ_CP038341.1
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NZ_CP038348.1
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NZ_CP038379.1
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NZ_CP038335.1
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NZ_CP038320.1
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NZ_CP038368.1
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NZ_CP038304.1
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NZ_CP038420.1
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NZ_CP038354.1
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NZ_CP038418.1
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NZ_CP038291.1
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NZ_CP038312.1
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NZ_CP038404.1
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NZ_CP038308.1
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NZ_CP038371.1
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NZ_CP038293.1
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NZ_CP038283.1
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NZ_CP038424.1
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NZ_CP045976.1
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NZ_CP046526.1
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NZ_CP062772.1
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NZ_CP062770.1
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CP034937.1
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NZ_CP040310.1
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NZ_CP040306.1
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NZ_CP040312.1
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NZ_CP040317.1
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NZ_CP040315.1
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NZ_CP040308.1
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NZ_CP035546.1
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NZ_CP062764.1
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NZ_CP062750.1
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NZ_CP062759.1
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NZ_CP062762.1
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NZ_CP062706.1
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NZ_CP062747.1
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NZ_CP062745.1
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NZ_CP062775.1
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NZ_CP062712.1
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NZ_CP062701.1
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NZ_CP062709.1
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NZ_CP062779.1
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CP051823.1
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NZ_CP062734.1
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NZ_CP062726.1
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NZ_CP062716.1
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NZ_CP062703.1
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NZ_CP062740.1
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NZ_CP062728.1
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NZ_CP062718.1
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CP051839.1
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CP051807.1
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CP051803.1
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CP051801.1
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CP051799.1
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CP051797.1
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CP051795.1
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CP051791.1
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CP051789.1
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CP051785.1
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CP051820.1
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CP051781.1
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CP051818.1
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CP051777.1
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CP051815.1
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CP051813.1
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CP051810.1
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NZ_CP114133.1
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NZ_CP066750.1
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NZ_CP066755.1
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NZ_AP026091.1
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NZ_AP026081.1
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NZ_AP026102.1
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NZ_AP026086.1
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NZ_AP026119.1
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NZ_AP026093.1
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NZ_AP026117.1
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NZ_AP026111.1
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NZ_AP026100.1
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NZ_AP026096.1
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NZ_AP026088.1
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NZ_AP026083.1
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NZ_AP026115.1
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NZ_AP026109.1
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NZ_CP089037.1
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NZ_CP089273.1
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NZ_CP082836.1
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NZ_CP104650.1
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NZ_CP104648.1
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NZ_CP104646.1
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CP088027.1
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CP088049.1
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CP088051.1
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CP088029.1
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CP088053.1
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CP088055.1
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CP088072.1
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CP088033.1
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CP088057.1
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CP088035.1
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CP088059.1
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CP088037.1
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CP088061.1
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CP088065.1
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CP088031.1
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CP088063.1
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CP088039.1
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CP088070.1
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CP088068.1
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CP088041.1
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CP088045.1
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CP088043.1
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CP088047.1
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CP073602.1
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CP073592.1
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CP073594.1
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CP073596.1
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CP073598.1
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CP073600.1
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NZ_CP076234.1
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NZ_CP076239.1
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NZ_CP076246.1
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NZ_CP076231.1
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NZ_CP076242.1
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NZ_CP076244.1
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NZ_CP076236.1
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CP073605.1
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CP073608.1
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CP073610.1
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CP073615.1
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CP073618.1
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CP073620.1
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NZ_CP018253.1
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NZ_CP018240.1
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NZ_CP018242.1
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NZ_CP018248.1
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NZ_CP018244.1
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NZ_CP018246.1
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NZ_CP018238.1
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NZ_CP018251.1
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NZ_CP015816.1
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NZ_CP017439.1
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NZ_CP017435.1
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NZ_CP017443.1
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NZ_CP010305.1
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NZ_CP017447.1
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NZ_CP017437.1
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NZ_CP016626.1
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NC_011350.1
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NZ_CP008806.1
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NZ_CP015854.1
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NC_013010.1
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NZ_CP032809.1
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NZ_CP032794.1
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NZ_CP032812.1
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NZ_CP032804.1
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NZ_CP032802.1
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NZ_CP032796.1
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NZ_CP032790.1
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NZ_CP028679.1
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CP043020.1
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CP043012.1
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CP043023.1
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CP043016.1
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NZ_CP040573.1
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NZ_CP028682.1
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NZ_CP028658.1
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NZ_CP028619.1
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NZ_CP028670.1
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NZ_CP028643.1
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NZ_CP028628.1
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NZ_CP028602.1
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NZ_CP028667.1
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NZ_CP028664.1
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NZ_CP028625.1
See Comparison
NZ_CP028622.1
See Comparison
NZ_CP028649.1
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NZ_CP028673.1
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NZ_CP028631.1
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NZ_CP028676.1
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NZ_CP028599.1
See Comparison
NZ_CP035367.1
See Comparison
NZ_CP028646.1
See Comparison
NZ_CP028637.1
See Comparison
NZ_CP028634.1
See Comparison
NZ_CP028606.1
See Comparison
NZ_CP028597.1
See Comparison
NZ_CP028661.1
See Comparison
NZ_CP028640.1
See Comparison
NZ_CP028616.1
See Comparison
NZ_CP028595.1
See Comparison
NZ_CP030765.1
See Comparison
NZ_CP034809.1
See Comparison
NZ_CP034796.1
See Comparison
NZ_CP034800.1
See Comparison
NZ_CP034795.1
See Comparison
NZ_CP034802.1
See Comparison
NZ_CP034793.1
See Comparison
CP058234.1
See Comparison
NZ_CP022052.2
See Comparison
NZ_CP015847.2
See Comparison
NZ_CP015844.2
See Comparison
NZ_CP111097.1
See Comparison
NZ_CP111100.1
See Comparison
CP126907.1
See Comparison
NZ_CP145947.1
See Comparison
NZ_CP145945.1
See Comparison
NZ_CP111099.1
See Comparison
NZ_CP140520.1
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NZ_CP039835.1
See Comparison
CP058232.1
See Comparison
NZ_CP040108.1
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NZ_CP038301.1
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NZ_CP038289.1
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NZ_CP038422.1
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NZ_CP038426.1
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NZ_CP038382.1
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NZ_CP038415.1
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NZ_CP038401.1
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NZ_CP038348.1
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NZ_CP038379.1
See Comparison
NZ_CP038368.1
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NZ_CP038335.1
See Comparison
NZ_CP038354.1
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NZ_CP038420.1
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NZ_CP038312.1
See Comparison
NZ_CP038418.1
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NZ_CP038308.1
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NZ_CP038404.1
See Comparison
NZ_CP038293.1
See Comparison
NZ_CP038283.1
See Comparison
NZ_CP038371.1
See Comparison
NZ_CP038424.1
See Comparison
NZ_CP038318.1
See Comparison
NZ_CP038356.1
See Comparison
NZ_CP038345.1
See Comparison
NZ_CP038362.1
See Comparison
NZ_CP038332.1
See Comparison
NZ_CP038314.1
See Comparison
NZ_CP038341.1
See Comparison
NZ_CP038286.1
See Comparison
NZ_CP038320.1
See Comparison
NZ_CP038304.1
See Comparison
NZ_CP046526.1
See Comparison
NZ_CP038291.1
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CP034937.1
See Comparison
NZ_CP062770.1
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NZ_CP045976.1
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NZ_CP035546.1
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NZ_CP062759.1
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NZ_CP062762.1
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NZ_CP062747.1
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NZ_CP062745.1
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NZ_CP040310.1
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NZ_CP062783.1
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NZ_CP040306.1
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NZ_CP040312.1
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NZ_CP040317.1
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NZ_CP040315.1
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NZ_CP062756.1
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NZ_CP040308.1
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NZ_CP062775.1
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NZ_CP062714.1
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NZ_CP062764.1
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NZ_CP062701.1
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NZ_CP062750.1
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NZ_CP062779.1
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NZ_CP062743.1
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NZ_CP062734.1
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NZ_CP062737.1
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NZ_CP062726.1
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NZ_CP062716.1
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NZ_CP062772.1
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NZ_CP062767.1
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NZ_CP062703.1
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NZ_CP062753.1
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NZ_CP062740.1
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NZ_CP062732.1
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NZ_CP062728.1
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NZ_CP062724.1
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NZ_CP062718.1
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NZ_CP062706.1
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CP051799.1
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NZ_CP062781.1
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NZ_CP062730.1
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NZ_CP062722.1
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NZ_CP062720.1
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CP051791.1
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CP051818.1
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CP051789.1
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CP051815.1
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CP051785.1
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CP051813.1
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CP051781.1
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CP051810.1
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CP088049.1
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CP073620.1
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NC_013010.1
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NC_011350.1
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CP043012.1
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CP043023.1
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CP043016.1
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NZ_CP028619.1
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CP051801.1
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CP051797.1
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CP051795.1
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CP051791.1
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CP051789.1
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CP051781.1
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CP051777.1
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NZ_AP026102.1
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NZ_AP026086.1
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NZ_AP026088.1
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NZ_AP026111.1
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NZ_AP026083.1
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NZ_AP026100.1
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NZ_AP026119.1
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NZ_AP026115.1
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NZ_AP026096.1
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NZ_AP026109.1
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NZ_CP082836.1
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NZ_CP104650.1
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NZ_CP104648.1
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NZ_CP104646.1
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Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore