PLSDB
v. 2024_05_31_v2
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Typing
Plasmid CP051795.1
Sequence
Nucleotide Information
Accession
CP051795.1
Description
Escherichia coli O157:H7 strain FLT_2011B plasmid pFLT_2011B-1, complete sequence
Source
insd
Topology
circular
Length
95633 bp
GC Content
0.48 %
Created at NCBI
Feb. 8, 2021
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (83334)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Assembly
Genome Data Information
Accession
GCA_016834755.1
Assembly Coverage
284
Biosample
Curated Collection Information
Accession
14648868
PLASMID INFORMATION
BIOSAMPLE_pathotype
STEC
GEOGRAPHICAL INFORMATION
Original Query
40.524829N;98.140806W
Original Query Type
coordinates
Coordinates (Lat/Lon)
40.52/-98.14
Address
Roman L. Hruska U.S. Meat Animal Research Center, 844, Road 313, Clay Center, Clay County, Nebraska, 68933, United States
ECOSYSTEM
Original Query
cattle,feces
Classification
fecal,gastrointestinal_system,host_associated
Host-associated Taxon
Bos taurus (
9913
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
CP051794.1
CP051793.1
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CP088035.1
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CP088068.1
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CP088041.1
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CP088037.1
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CP088065.1
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CP088045.1
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CP088043.1
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CP088047.1
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CP088049.1
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CP088051.1
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CP088053.1
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CP088055.1
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CP088072.1
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CP088057.1
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CP088059.1
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CP088061.1
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CP088031.1
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NZ_CP076234.1
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NZ_CP076246.1
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NZ_CP076231.1
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NZ_CP076242.1
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NZ_CP076244.1
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NZ_CP076236.1
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NZ_CP076239.1
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CP073592.1
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CP073594.1
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CP073596.1
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CP073598.1
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CP073600.1
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CP073602.1
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CP073605.1
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CP073608.1
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CP073610.1
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CP073615.1
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CP073618.1
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CP073620.1
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NZ_CP017439.1
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NZ_CP018253.1
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NZ_CP018240.1
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NZ_CP018242.1
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NZ_CP017435.1
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NZ_CP018248.1
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NZ_CP018244.1
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NZ_CP017443.1
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NZ_CP018246.1
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NZ_CP017447.1
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NZ_CP018238.1
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NZ_CP017437.1
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NZ_CP018251.1
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NZ_CP016626.1
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NZ_CP032804.1
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NZ_CP008806.1
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NZ_CP010305.1
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NZ_CP015816.1
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NC_013010.1
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NZ_CP032802.1
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NZ_CP032796.1
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NZ_CP032790.1
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NZ_CP015854.1
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NC_011350.1
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NZ_CP032809.1
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NZ_CP032794.1
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NZ_CP032812.1
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NZ_CP028673.1
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CP043020.1
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CP043012.1
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CP043023.1
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CP043016.1
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NZ_CP028679.1
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NZ_CP040573.1
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NZ_CP028676.1
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NZ_CP028682.1
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NZ_CP028649.1
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NZ_CP028631.1
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NZ_CP028658.1
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NZ_CP028619.1
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NZ_CP028599.1
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NZ_CP028670.1
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NZ_CP028646.1
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NZ_CP028643.1
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NZ_CP028637.1
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NZ_CP028628.1
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NZ_CP028602.1
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NZ_CP028667.1
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NZ_CP028634.1
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NZ_CP028664.1
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NZ_CP028606.1
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NZ_CP028625.1
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NZ_CP028597.1
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NZ_CP028622.1
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NZ_CP028661.1
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NZ_CP028640.1
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NZ_CP028616.1
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NZ_CP028595.1
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NZ_CP145947.1
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NZ_CP034809.1
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NZ_CP034796.1
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NZ_CP034800.1
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NZ_CP034795.1
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NZ_CP034802.1
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NZ_CP034793.1
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NZ_CP030765.1
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NZ_CP015847.2
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CP126907.1
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NZ_CP035367.1
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NZ_CP022052.2
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NZ_CP015844.2
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NZ_CP145945.1
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NZ_CP039835.1
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NZ_CP111097.1
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NZ_CP111100.1
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CP058232.1
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CP058234.1
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NZ_CP111099.1
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NZ_CP140520.1
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NZ_CP040108.1
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NZ_CP038382.1
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NZ_CP038348.1
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NZ_CP038335.1
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NZ_CP038318.1
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NZ_CP038301.1
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NZ_CP038289.1
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NZ_CP038422.1
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NZ_CP038379.1
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NZ_CP038404.1
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NZ_CP038368.1
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NZ_CP038371.1
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NZ_CP038354.1
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NZ_CP038356.1
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NZ_CP038312.1
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NZ_CP038345.1
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NZ_CP038332.1
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NZ_CP038308.1
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NZ_CP038293.1
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NZ_CP038283.1
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NZ_CP038314.1
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NZ_CP038424.1
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NZ_CP038286.1
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NZ_CP038341.1
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NZ_CP038401.1
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NZ_CP046526.1
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NZ_CP038320.1
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NZ_CP038304.1
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NZ_CP038291.1
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CP034937.1
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NZ_CP062770.1
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NZ_CP045976.1
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NZ_CP035546.1
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NZ_CP040310.1
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NZ_CP040306.1
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NZ_CP040312.1
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NZ_CP040317.1
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CP051785.1
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CP051781.1
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CP051777.1
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CP051823.1
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CP051820.1
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CP051818.1
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CP051815.1
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CP051813.1
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CP051810.1
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CP051839.1
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CP051807.1
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CP051803.1
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CP051801.1
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CP051799.1
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CP051797.1
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CP051791.1
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CP051789.1
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NZ_CP066755.1
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NZ_AP026091.1
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NZ_CP114133.1
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NZ_AP026081.1
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NZ_AP026102.1
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NZ_AP026086.1
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NZ_AP026119.1
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NZ_AP026093.1
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NZ_AP026117.1
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NZ_AP026115.1
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NZ_AP026111.1
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NZ_AP026109.1
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NZ_AP026100.1
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NZ_AP026096.1
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NZ_CP082836.1
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CP088027.1
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NZ_CP104650.1
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NZ_CP104648.1
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NZ_CP104646.1
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NZ_CP089273.1
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NZ_CP089037.1
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CP088037.1
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CP088065.1
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CP088029.1
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CP088063.1
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CP088033.1
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CP088039.1
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CP088035.1
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CP088070.1
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NZ_CP076234.1
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CP088068.1
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CP088041.1
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CP088045.1
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CP088043.1
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CP088047.1
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CP088049.1
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CP088051.1
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CP088053.1
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CP088055.1
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CP088072.1
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CP088057.1
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CP088059.1
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CP088061.1
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CP088031.1
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NZ_CP076244.1
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NZ_CP076236.1
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NZ_CP076239.1
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NZ_CP076246.1
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NZ_CP076231.1
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NZ_CP076242.1
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CP073592.1
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CP073594.1
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CP073596.1
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CP073598.1
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CP073600.1
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CP073602.1
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CP073605.1
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CP073608.1
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CP073610.1
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CP073615.1
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CP073618.1
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CP073620.1
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NZ_CP018238.1
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NZ_CP018251.1
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NZ_CP017439.1
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NZ_CP018253.1
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NZ_CP018240.1
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NZ_CP017435.1
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NZ_CP018242.1
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NZ_CP017443.1
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NZ_CP018248.1
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NZ_CP017447.1
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NZ_CP018244.1
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NZ_CP017437.1
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NZ_CP018246.1
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NZ_CP008806.1
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NZ_CP016626.1
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NZ_CP015816.1
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NZ_CP010305.1
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NZ_CP032796.1
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NZ_CP032790.1
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NZ_CP040573.1
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NC_013010.1
See Comparison
NC_011350.1
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CP043012.1
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CP043023.1
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CP043016.1
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NZ_CP015854.1
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NZ_CP028643.1
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NZ_CP032809.1
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NZ_CP032794.1
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NZ_CP032812.1
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NZ_CP032804.1
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NZ_CP032802.1
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CP043020.1
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NZ_CP028628.1
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NZ_CP028602.1
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NZ_CP028606.1
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NZ_CP028667.1
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NZ_CP028664.1
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NZ_CP028625.1
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NZ_CP028622.1
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NZ_CP028673.1
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NZ_CP028676.1
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NZ_CP028649.1
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NZ_CP028679.1
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NZ_CP028682.1
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NZ_CP028658.1
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NZ_CP028619.1
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NZ_CP028597.1
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NZ_CP028670.1
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NZ_CP028631.1
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NZ_CP028661.1
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NZ_CP028599.1
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NZ_CP028646.1
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NZ_CP028640.1
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NZ_CP028637.1
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NZ_CP028616.1
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NZ_CP028634.1
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NZ_CP028595.1
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NZ_CP035367.1
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NZ_CP034809.1
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NZ_CP034796.1
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NZ_CP034800.1
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NZ_CP034795.1
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NZ_CP015847.2
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NZ_CP034802.1
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NZ_CP034793.1
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NZ_CP022052.2
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NZ_CP030765.1
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NZ_CP015844.2
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CP126907.1
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NZ_CP111097.1
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NZ_CP111099.1
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NZ_CP145947.1
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NZ_CP145945.1
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NZ_CP111100.1
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NZ_CP038318.1
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NZ_CP039835.1
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NZ_CP040108.1
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NZ_CP038348.1
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NZ_CP038335.1
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NZ_CP038420.1
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NZ_CP038418.1
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NZ_CP038404.1
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NZ_CP038371.1
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NZ_CP038356.1
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NZ_CP038345.1
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NZ_CP038332.1
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NZ_CP038314.1
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NZ_CP140520.1
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CP058232.1
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CP058234.1
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NZ_CP038301.1
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NZ_CP038286.1
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NZ_CP038289.1
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NZ_CP038422.1
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NZ_CP038426.1
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NZ_CP038382.1
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NZ_CP038415.1
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NZ_CP038401.1
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NZ_CP038354.1
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NZ_CP062772.1
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NZ_CP038312.1
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NZ_CP038308.1
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NZ_CP038293.1
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NZ_CP038283.1
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NZ_CP038424.1
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NZ_CP038362.1
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NZ_CP038341.1
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NZ_CP038320.1
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NZ_CP038304.1
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NZ_CP038291.1
See Comparison
CP034937.1
See Comparison
NZ_CP045976.1
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NZ_CP035546.1
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NZ_CP040310.1
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NZ_CP040306.1
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NZ_CP040312.1
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NZ_CP040317.1
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NZ_CP040315.1
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NZ_CP040308.1
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NZ_CP062779.1
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NZ_CP038379.1
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NZ_CP038368.1
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NZ_CP046526.1
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NZ_CP062759.1
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NZ_CP062762.1
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NZ_CP062747.1
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NZ_CP062745.1
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NZ_CP062783.1
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NZ_CP062756.1
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NZ_CP062775.1
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NZ_CP062764.1
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NZ_CP062750.1
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NZ_CP062743.1
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NZ_CP062737.1
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NZ_CP062767.1
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NZ_CP062734.1
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NZ_CP062770.1
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NZ_CP062726.1
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NZ_CP062753.1
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CP051823.1
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NZ_CP062732.1
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NZ_CP062724.1
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NZ_CP062714.1
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NZ_CP062701.1
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NZ_CP062716.1
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NZ_CP062703.1
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NZ_CP062740.1
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NZ_CP062728.1
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NZ_CP062718.1
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NZ_CP062706.1
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NZ_CP062781.1
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NZ_CP062730.1
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NZ_CP062722.1
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NZ_CP062720.1
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NZ_CP062712.1
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NZ_CP062709.1
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CP051820.1
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CP051818.1
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CP051815.1
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CP051781.1
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CP051813.1
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CP051777.1
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CP051810.1
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CP051839.1
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CP051807.1
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CP051803.1
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CP051801.1
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CP051799.1
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CP051797.1
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CP051791.1
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CP051789.1
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CP051785.1
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NZ_CP114133.1
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NZ_CP066750.1
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NZ_CP066755.1
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NZ_CP082836.1
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NZ_AP026083.1
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NZ_AP026115.1
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NZ_AP026109.1
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NZ_AP026091.1
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NZ_AP026081.1
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NZ_AP026102.1
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NZ_AP026086.1
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NZ_AP026119.1
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NZ_CP076234.1
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NZ_AP026093.1
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NZ_AP026117.1
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NZ_AP026111.1
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NZ_AP026100.1
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NZ_AP026096.1
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NZ_AP026088.1
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CP088027.1
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CP088029.1
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CP088033.1
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CP088035.1
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CP088037.1
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NZ_CP076236.1
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NZ_CP104650.1
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NZ_CP104648.1
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NZ_CP104646.1
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NZ_CP089273.1
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NZ_CP089037.1
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CP088065.1
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CP088063.1
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CP088039.1
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CP088070.1
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CP088068.1
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CP088041.1
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CP088045.1
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CP088043.1
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CP088047.1
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CP088049.1
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CP088051.1
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CP088053.1
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CP088055.1
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CP088072.1
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CP088057.1
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CP088059.1
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CP088061.1
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CP088031.1
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NZ_CP076239.1
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NZ_CP076246.1
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NZ_CP076231.1
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NZ_CP076242.1
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NZ_CP076244.1
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CP043023.1
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NZ_CP018253.1
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NZ_CP018240.1
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NZ_CP018242.1
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NZ_CP018248.1
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NZ_CP018244.1
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NZ_CP018246.1
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NZ_CP018238.1
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NZ_CP016626.1
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NZ_CP015816.1
See Comparison
NZ_CP010305.1
See Comparison
NZ_CP032809.1
See Comparison
NZ_CP032794.1
See Comparison
NZ_CP032812.1
See Comparison
NZ_CP032804.1
See Comparison
NZ_CP032802.1
See Comparison
NZ_CP032796.1
See Comparison
NZ_CP032790.1
See Comparison
CP073592.1
See Comparison
CP073594.1
See Comparison
CP073596.1
See Comparison
CP073598.1
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CP073600.1
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CP073602.1
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CP073605.1
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CP073608.1
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CP073610.1
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CP073615.1
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CP073618.1
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CP073620.1
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NZ_CP018251.1
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NZ_CP017439.1
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NZ_CP017435.1
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NZ_CP017443.1
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NZ_CP017447.1
See Comparison
NZ_CP017437.1
See Comparison
NZ_CP008806.1
See Comparison
NC_013010.1
See Comparison
NC_011350.1
See Comparison
CP043016.1
See Comparison
NZ_CP015854.1
See Comparison
CP043020.1
See Comparison
CP043012.1
See Comparison
NZ_CP040573.1
See Comparison
NZ_CP028661.1
See Comparison
NZ_CP028628.1
See Comparison
NZ_CP028602.1
See Comparison
NZ_CP028667.1
See Comparison
NZ_CP028664.1
See Comparison
NZ_CP028625.1
See Comparison
NZ_CP028622.1
See Comparison
NZ_CP028673.1
See Comparison
NZ_CP028676.1
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NZ_CP028649.1
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NZ_CP028631.1
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NZ_CP028599.1
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NZ_CP028679.1
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NZ_CP028682.1
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NZ_CP028658.1
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NZ_CP028619.1
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NZ_CP028670.1
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NZ_CP028643.1
See Comparison
NZ_CP028640.1
See Comparison
NZ_CP028646.1
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NZ_CP028616.1
See Comparison
NZ_CP028637.1
See Comparison
NZ_CP028595.1
See Comparison
NZ_CP028634.1
See Comparison
NZ_CP028606.1
See Comparison
NZ_CP145947.1
See Comparison
NZ_CP028597.1
See Comparison
NZ_CP034809.1
See Comparison
NZ_CP034796.1
See Comparison
NZ_CP034800.1
See Comparison
NZ_CP034795.1
See Comparison
NZ_CP034802.1
See Comparison
NZ_CP034793.1
See Comparison
NZ_CP030765.1
See Comparison
NZ_CP015844.2
See Comparison
CP126907.1
See Comparison
NZ_CP035367.1
See Comparison
NZ_CP022052.2
See Comparison
NZ_CP015847.2
See Comparison
NZ_CP145945.1
See Comparison
NZ_CP111099.1
See Comparison
NZ_CP111097.1
See Comparison
NZ_CP111100.1
See Comparison
NZ_CP140520.1
See Comparison
NZ_CP038312.1
See Comparison
NZ_CP039835.1
See Comparison
NZ_CP040108.1
See Comparison
CP058232.1
See Comparison
CP058234.1
See Comparison
NZ_CP038348.1
See Comparison
NZ_CP038335.1
See Comparison
NZ_CP038420.1
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CP051820.1
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CP051818.1
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CP051815.1
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CP051813.1
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CP051810.1
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CP051839.1
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CP051807.1
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CP051803.1
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CP051801.1
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CP051799.1
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CP051797.1
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CP051791.1
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CP051789.1
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CP051785.1
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CP051781.1
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NZ_CP066755.1
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NZ_AP026102.1
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NZ_AP026086.1
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NZ_AP026117.1
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NZ_AP026111.1
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NZ_AP026100.1
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NZ_AP026083.1
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NZ_CP082836.1
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CP088039.1
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NZ_CP104650.1
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NZ_CP104648.1
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NZ_CP104646.1
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NZ_CP089273.1
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NZ_CP089037.1
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CP088070.1
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CP088068.1
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CP088041.1
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CP088027.1
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CP088045.1
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CP088029.1
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CP088033.1
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CP088043.1
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CP088035.1
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CP088047.1
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CP088037.1
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CP088065.1
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CP088049.1
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CP088063.1
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CP088051.1
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CP088053.1
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CP088055.1
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CP088072.1
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CP088057.1
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CP088059.1
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CP088061.1
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CP088031.1
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CP073592.1
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NZ_CP076239.1
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NZ_CP076246.1
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NZ_CP076231.1
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NZ_CP076236.1
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CP073594.1
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CP073596.1
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CP073598.1
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CP073600.1
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CP073602.1
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CP073605.1
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CP073608.1
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CP073610.1
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CP073615.1
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CP073618.1
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CP073620.1
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NZ_CP018240.1
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NZ_CP018242.1
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NZ_CP018248.1
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NZ_CP018244.1
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NC_013010.1
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NC_011350.1
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CP043020.1
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NZ_CP032812.1
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CP043012.1
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CP043023.1
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CP043016.1
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NZ_CP028616.1
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NZ_CP028622.1
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NZ_CP028673.1
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NZ_CP028631.1
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NZ_CP028599.1
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NZ_CP028682.1
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NZ_CP028637.1
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NZ_CP028634.1
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NZ_CP028606.1
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NZ_CP028597.1
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NZ_CP028643.1
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NZ_CP028628.1
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NZ_CP038401.1
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NZ_CP038304.1
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NZ_CP038341.1
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NZ_CP038291.1
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NZ_CP038320.1
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CP034937.1
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NZ_CP035546.1
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NZ_CP040306.1
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NZ_CP040317.1
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NZ_CP040312.1
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NZ_CP062747.1
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NZ_CP062772.1
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NZ_CP062759.1
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NZ_CP040308.1
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NZ_CP062770.1
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NZ_CP062762.1
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NZ_CP062756.1
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NZ_CP062745.1
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NZ_CP062783.1
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Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore