Plasmid CP088047.1

Sequence

Nucleotide Information

Accession	CP088047.1
Description	Escherichia coli strain 432298 plasmid p432298, complete sequence
Source	insd
Topology	circular
Length	93727 bp
GC Content	0.48 %
Created at NCBI	Nov. 29, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Escherichia coli (562)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Escherichia (561)
Species	Escherichia_coli (562)
Strain

Assembly

Genome Data Information

Accession	GCA_012218465.2
Assembly Coverage	103

Biosample

Curated Collection Information

Accession	8765096

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	United Kingdom,United Kingdom
Original Query Type	name
Coordinates (Lat/Lon)	54.70/-3.28
Address	United Kingdom,United Kingdom

ECOSYSTEM

Original Query	animal
Classification	host_associated
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Similar Plasmids

based on Mash distance

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CP088037.1	See Comparison
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CP088063.1	See Comparison
CP088039.1	See Comparison
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CP088045.1	See Comparison
CP088043.1	See Comparison
CP088049.1	See Comparison
CP088051.1	See Comparison
CP088053.1	See Comparison
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NZ_CP028676.1	See Comparison
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NZ_CP038283.1	See Comparison
NZ_CP038341.1	See Comparison
NZ_CP038320.1	See Comparison
NZ_CP038304.1	See Comparison
NZ_CP038291.1	See Comparison
NZ_CP018244.1	See Comparison
NZ_CP018246.1	See Comparison
NZ_CP018251.1	See Comparison
NZ_CP040573.1	See Comparison
NZ_CP028634.1	See Comparison
NZ_CP028606.1	See Comparison
NZ_CP028661.1	See Comparison
NZ_CP028640.1	See Comparison
NZ_CP028616.1	See Comparison
NZ_CP028595.1	See Comparison
NZ_CP034809.1	See Comparison
NZ_CP034796.1	See Comparison
NZ_CP034795.1	See Comparison
NZ_CP038382.1	See Comparison
NZ_CP038420.1	See Comparison
NZ_CP038418.1	See Comparison
NZ_CP038404.1	See Comparison
NZ_CP038371.1	See Comparison
NZ_CP038356.1	See Comparison
NZ_CP038332.1	See Comparison
NZ_CP038286.1	See Comparison
NZ_CP038426.1	See Comparison
NZ_CP038415.1	See Comparison
NZ_CP038401.1	See Comparison
NZ_CP040308.1	See Comparison
NZ_CP045976.1	See Comparison
NZ_CP062772.1	See Comparison
NZ_CP040310.1	See Comparison
NZ_CP040306.1	See Comparison
NZ_CP040312.1	See Comparison
NZ_CP040317.1	See Comparison
NZ_CP040315.1	See Comparison
NZ_CP062770.1	See Comparison
NZ_CP062759.1	See Comparison
NZ_CP062762.1	See Comparison
NZ_CP062747.1	See Comparison
NZ_CP062745.1	See Comparison
NZ_CP062783.1	See Comparison
NZ_CP062756.1	See Comparison
NZ_CP062775.1	See Comparison
NZ_CP062764.1	See Comparison
NZ_CP062750.1	See Comparison
NZ_CP062743.1	See Comparison
NZ_CP062737.1	See Comparison
NZ_CP062767.1	See Comparison
NZ_CP062714.1	See Comparison
NZ_CP062753.1	See Comparison
NZ_CP062734.1	See Comparison
NZ_CP062732.1	See Comparison
NZ_CP062724.1	See Comparison
NZ_CP062726.1	See Comparison
NZ_CP062716.1	See Comparison
NZ_CP062703.1	See Comparison
NZ_CP062740.1	See Comparison
NZ_CP062728.1	See Comparison
NZ_CP062718.1	See Comparison
NZ_CP062706.1	See Comparison
NZ_CP062781.1	See Comparison
NZ_CP062730.1	See Comparison
NZ_CP062722.1	See Comparison
NZ_CP062720.1	See Comparison
NZ_CP062712.1	See Comparison
NZ_CP062709.1	See Comparison
CP051823.1	See Comparison
CP051820.1	See Comparison
CP051818.1	See Comparison
CP051813.1	See Comparison
CP051810.1	See Comparison
CP051839.1	See Comparison
CP051785.1	See Comparison
CP051795.1	See Comparison
CP051781.1	See Comparison
CP051789.1	See Comparison
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CP088037.1	See Comparison
NZ_CP114133.1	See Comparison
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NZ_AP026102.1	See Comparison
NZ_AP026086.1	See Comparison
NZ_AP026119.1	See Comparison
NZ_AP026117.1	See Comparison
NZ_AP026111.1	See Comparison
NZ_AP026100.1	See Comparison
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NZ_AP026083.1	See Comparison
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NZ_AP026109.1	See Comparison
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CP088068.1	See Comparison
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NZ_CP018240.1	See Comparison
NZ_CP018242.1	See Comparison
NZ_CP018244.1	See Comparison
NZ_CP018246.1	See Comparison
NZ_CP016626.1	See Comparison
NZ_CP032790.1	See Comparison
CP043016.1	See Comparison
NZ_CP040573.1	See Comparison
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NZ_CP028628.1	See Comparison
NZ_CP028667.1	See Comparison
NZ_CP028664.1	See Comparison
NZ_CP028625.1	See Comparison
NZ_CP028622.1	See Comparison
NZ_CP028673.1	See Comparison
NZ_CP028679.1	See Comparison
NZ_CP028676.1	See Comparison
NZ_CP028682.1	See Comparison
NZ_CP028658.1	See Comparison
NZ_CP028619.1	See Comparison
NZ_CP028670.1	See Comparison
NZ_CP028606.1	See Comparison
NZ_CP028649.1	See Comparison
NZ_CP028631.1	See Comparison
NZ_CP028661.1	See Comparison
NZ_CP028646.1	See Comparison
NZ_CP028640.1	See Comparison
NZ_CP028616.1	See Comparison
NZ_CP028637.1	See Comparison
NZ_CP028595.1	See Comparison
NZ_CP028634.1	See Comparison
NZ_CP022052.2	See Comparison
NZ_CP034809.1	See Comparison
NZ_CP034796.1	See Comparison
NZ_CP034795.1	See Comparison
NZ_CP030765.1	See Comparison
NZ_CP145947.1	See Comparison
NZ_CP015847.2	See Comparison
NZ_CP015844.2	See Comparison
NZ_CP145945.1	See Comparison
NZ_CP111100.1	See Comparison
CP058234.1	See Comparison
NZ_CP040108.1	See Comparison
NZ_CP038289.1	See Comparison
NZ_CP038422.1	See Comparison
NZ_CP038382.1	See Comparison
NZ_CP038420.1	See Comparison
NZ_CP038418.1	See Comparison
NZ_CP038404.1	See Comparison
NZ_CP038371.1	See Comparison
NZ_CP038356.1	See Comparison
NZ_CP038293.1	See Comparison
NZ_CP038283.1	See Comparison
NZ_CP038332.1	See Comparison
NZ_CP038341.1	See Comparison
NZ_CP038286.1	See Comparison
NZ_CP038426.1	See Comparison
NZ_CP038415.1	See Comparison
NZ_CP038320.1	See Comparison
NZ_CP038401.1	See Comparison
NZ_CP038379.1	See Comparison
NZ_CP038304.1	See Comparison
NZ_CP038291.1	See Comparison
NZ_CP046526.1	See Comparison
NZ_CP038312.1	See Comparison
NZ_CP038308.1	See Comparison
NZ_CP040310.1	See Comparison
NZ_CP040306.1	See Comparison
NZ_CP040312.1	See Comparison
NZ_CP040317.1	See Comparison
NZ_CP045976.1	See Comparison
NZ_CP040315.1	See Comparison
NZ_CP040308.1	See Comparison
NZ_CP062775.1	See Comparison
NZ_CP062764.1	See Comparison
NZ_CP062772.1	See Comparison
NZ_CP062750.1	See Comparison
NZ_CP062770.1	See Comparison
NZ_CP062743.1	See Comparison
NZ_CP062737.1	See Comparison
NZ_CP062759.1	See Comparison
NZ_CP062762.1	See Comparison
NZ_CP062767.1	See Comparison
NZ_CP062747.1	See Comparison
NZ_CP062745.1	See Comparison
NZ_CP062783.1	See Comparison
NZ_CP062756.1	See Comparison
NZ_CP062718.1	See Comparison
NZ_CP062706.1	See Comparison
NZ_CP062781.1	See Comparison
NZ_CP062730.1	See Comparison
NZ_CP062753.1	See Comparison
NZ_CP062722.1	See Comparison
NZ_CP062732.1	See Comparison
NZ_CP062720.1	See Comparison
NZ_CP062724.1	See Comparison
NZ_CP062712.1	See Comparison
NZ_CP062714.1	See Comparison
NZ_CP062709.1	See Comparison
NZ_CP062734.1	See Comparison
NZ_CP062726.1	See Comparison
NZ_CP062716.1	See Comparison
NZ_CP062703.1	See Comparison
NZ_CP062740.1	See Comparison
NZ_CP062728.1	See Comparison
CP051823.1	See Comparison
CP051820.1	See Comparison
CP051818.1	See Comparison
CP051813.1	See Comparison
CP051810.1	See Comparison
CP051839.1	See Comparison
CP051795.1	See Comparison
CP051789.1	See Comparison
CP051785.1	See Comparison
CP051781.1	See Comparison
NZ_CP114133.1	See Comparison
NZ_CP066750.1	See Comparison
NZ_AP026102.1	See Comparison
NZ_AP026086.1	See Comparison
NZ_AP026119.1	See Comparison
NZ_AP026117.1	See Comparison
NZ_AP026111.1	See Comparison
NZ_AP026100.1	See Comparison
NZ_AP026096.1	See Comparison
NZ_AP026083.1	See Comparison
NZ_AP026115.1	See Comparison
NZ_AP026109.1	See Comparison
CP088053.1	See Comparison
NZ_AP026081.1	See Comparison
NZ_CP082836.1	See Comparison
CP088027.1	See Comparison
CP088029.1	See Comparison
CP088033.1	See Comparison
CP088035.1	See Comparison
CP088037.1	See Comparison
CP088065.1	See Comparison
CP088063.1	See Comparison
CP088055.1	See Comparison
CP088039.1	See Comparison
CP088072.1	See Comparison
CP088057.1	See Comparison
CP088068.1	See Comparison
CP088041.1	See Comparison
CP088059.1	See Comparison
CP088045.1	See Comparison
CP088061.1	See Comparison
CP088043.1	See Comparison
CP088031.1	See Comparison
CP088047.1	See Comparison
NZ_CP018244.1	See Comparison
CP088049.1	See Comparison
CP088051.1	See Comparison
NZ_CP076234.1	See Comparison
NZ_CP076246.1	See Comparison
NZ_CP076231.1	See Comparison
NZ_CP076242.1	See Comparison
NZ_CP018246.1	See Comparison
NZ_CP018251.1	See Comparison
NZ_CP032790.1	See Comparison
NZ_CP018253.1	See Comparison
NZ_CP018240.1	See Comparison
NZ_CP018242.1	See Comparison
NZ_CP016626.1	See Comparison
NZ_CP040573.1	See Comparison
CP043020.1	See Comparison
CP043016.1	See Comparison
NZ_CP015854.1	See Comparison
NZ_CP028634.1	See Comparison
NZ_CP028619.1	See Comparison
NZ_CP028670.1	See Comparison
NZ_CP028643.1	See Comparison
NZ_CP028628.1	See Comparison
NZ_CP028606.1	See Comparison
NZ_CP028667.1	See Comparison
NZ_CP028661.1	See Comparison
NZ_CP028664.1	See Comparison
NZ_CP028625.1	See Comparison
NZ_CP028622.1	See Comparison
NZ_CP028679.1	See Comparison
NZ_CP028682.1	See Comparison
NZ_CP028640.1	See Comparison
NZ_CP028658.1	See Comparison
NZ_CP028673.1	See Comparison
NZ_CP028676.1	See Comparison
NZ_CP028616.1	See Comparison
NZ_CP028649.1	See Comparison
NZ_CP028595.1	See Comparison
NZ_CP028631.1	See Comparison
NZ_CP030765.1	See Comparison
NZ_CP028646.1	See Comparison
NZ_CP028637.1	See Comparison
NZ_CP034809.1	See Comparison
NZ_CP034796.1	See Comparison
NZ_CP034795.1	See Comparison
NZ_CP022052.2	See Comparison
NZ_CP015847.2	See Comparison
NZ_CP015844.2	See Comparison
NZ_CP145947.1	See Comparison
NZ_CP145945.1	See Comparison
CP058234.1	See Comparison
NZ_CP111100.1	See Comparison
NZ_CP040108.1	See Comparison
NZ_CP038371.1	See Comparison
NZ_CP038356.1	See Comparison
NZ_CP038332.1	See Comparison
NZ_CP038286.1	See Comparison
NZ_CP038289.1	See Comparison
NZ_CP038422.1	See Comparison
NZ_CP038426.1	See Comparison
NZ_CP038415.1	See Comparison
NZ_CP038382.1	See Comparison
NZ_CP038401.1	See Comparison
NZ_CP038379.1	See Comparison
NZ_CP038341.1	See Comparison
NZ_CP038312.1	See Comparison
NZ_CP038320.1	See Comparison
NZ_CP038304.1	See Comparison
NZ_CP038291.1	See Comparison
NZ_CP038420.1	See Comparison
NZ_CP038418.1	See Comparison
NZ_CP038308.1	See Comparison
NZ_CP038404.1	See Comparison
NZ_CP038293.1	See Comparison
NZ_CP038283.1	See Comparison
NZ_CP045976.1	See Comparison
NZ_CP040310.1	See Comparison
NZ_CP040306.1	See Comparison
NZ_CP040312.1	See Comparison
NZ_CP040317.1	See Comparison
NZ_CP040315.1	See Comparison
NZ_CP062772.1	See Comparison
NZ_CP040308.1	See Comparison
NZ_CP062718.1	See Comparison
NZ_CP062706.1	See Comparison
NZ_CP062781.1	See Comparison
NZ_CP062730.1	See Comparison
NZ_CP046526.1	See Comparison
NZ_CP062764.1	See Comparison
NZ_CP062750.1	See Comparison
NZ_CP062743.1	See Comparison
NZ_CP062737.1	See Comparison
NZ_CP062770.1	See Comparison
NZ_CP062767.1	See Comparison
NZ_CP062722.1	See Comparison
NZ_CP062759.1	See Comparison
NZ_CP062720.1	See Comparison
NZ_CP062712.1	See Comparison
NZ_CP062753.1	See Comparison
NZ_CP062762.1	See Comparison
NZ_CP062732.1	See Comparison
NZ_CP062747.1	See Comparison
NZ_CP062724.1	See Comparison
NZ_CP062709.1	See Comparison
NZ_CP062745.1	See Comparison
NZ_CP062714.1	See Comparison
NZ_CP062734.1	See Comparison
NZ_CP062726.1	See Comparison
NZ_CP062716.1	See Comparison
NZ_CP062703.1	See Comparison
NZ_CP062783.1	See Comparison
NZ_CP062740.1	See Comparison
NZ_CP062756.1	See Comparison
NZ_CP062728.1	See Comparison
NZ_CP062775.1	See Comparison
CP051823.1	See Comparison
CP051820.1	See Comparison
CP051818.1	See Comparison
CP051813.1	See Comparison
CP051839.1	See Comparison
CP051810.1	See Comparison
NZ_CP082836.1	See Comparison
CP051795.1	See Comparison
CP051789.1	See Comparison
CP051785.1	See Comparison
CP051781.1	See Comparison
NZ_CP066750.1	See Comparison
NZ_CP114133.1	See Comparison
NZ_AP026081.1	See Comparison
NZ_AP026102.1	See Comparison
NZ_AP026086.1	See Comparison
NZ_AP026119.1	See Comparison
NZ_AP026117.1	See Comparison
NZ_AP026111.1	See Comparison
NZ_AP026100.1	See Comparison
NZ_AP026096.1	See Comparison
NZ_AP026083.1	See Comparison
NZ_AP026115.1	See Comparison
NZ_AP026109.1	See Comparison
CP088027.1	See Comparison
CP088049.1	See Comparison
CP088051.1	See Comparison
CP088029.1	See Comparison
CP088053.1	See Comparison
CP088055.1	See Comparison
CP088033.1	See Comparison
CP088072.1	See Comparison
CP088035.1	See Comparison
CP088057.1	See Comparison
CP088037.1	See Comparison
CP088059.1	See Comparison
CP088065.1	See Comparison
CP088061.1	See Comparison
CP088063.1	See Comparison
CP088031.1	See Comparison
CP088039.1	See Comparison
CP088068.1	See Comparison
CP088041.1	See Comparison
CP088045.1	See Comparison
CP088043.1	See Comparison
NZ_CP018253.1	See Comparison
NZ_CP076234.1	See Comparison
NZ_CP076246.1	See Comparison
NZ_CP076231.1	See Comparison
NZ_CP076242.1	See Comparison
NZ_CP018251.1	See Comparison
NZ_CP018240.1	See Comparison
NZ_CP018242.1	See Comparison
NZ_CP018244.1	See Comparison
NZ_CP018246.1	See Comparison
NZ_CP016626.1	See Comparison
CP043020.1	See Comparison
NZ_CP032790.1	See Comparison
CP043016.1	See Comparison
NZ_CP040573.1	See Comparison
NZ_CP015854.1	See Comparison
NZ_CP028679.1	See Comparison
NZ_CP028643.1	See Comparison
NZ_CP028628.1	See Comparison
NZ_CP028682.1	See Comparison
NZ_CP028667.1	See Comparison
NZ_CP028658.1	See Comparison
NZ_CP028664.1	See Comparison
NZ_CP028619.1	See Comparison
NZ_CP028625.1	See Comparison
NZ_CP028670.1	See Comparison
NZ_CP028622.1	See Comparison
NZ_CP028676.1	See Comparison
NZ_CP028649.1	See Comparison
NZ_CP028606.1	See Comparison
NZ_CP028673.1	See Comparison
NZ_CP028661.1	See Comparison
NZ_CP028631.1	See Comparison
NZ_CP028646.1	See Comparison
NZ_CP028640.1	See Comparison
NZ_CP028616.1	See Comparison
NZ_CP028637.1	See Comparison
NZ_CP028595.1	See Comparison
NZ_CP028634.1	See Comparison
NZ_CP034809.1	See Comparison
NZ_CP034796.1	See Comparison
NZ_CP034795.1	See Comparison
NZ_CP030765.1	See Comparison
NZ_CP022052.2	See Comparison
NZ_CP015847.2	See Comparison
NZ_CP015844.2	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore