Plasmid CP073615.1

Sequence

Nucleotide Information

Accession CP073615.1
Description Escherichia coli strain 588888 plasmid p588888_2, complete sequence
Source insd
Topology circular
Length 92868 bp
GC Content 0.48 %
Created at NCBI April 23, 2021



Assembly

Genome Data Information

Accession GCA_012107915.2
Assembly Coverage 213


Biosample

Curated Collection Information

Accession 10057267

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query United Kingdom
Original Query Type name
Coordinates (Lat/Lon) 54.70/-3.28
Address United Kingdom

ECOSYSTEM
Original Query Homo sapiens
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization


Plasmids from same Biosample



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based on Mash distance

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NZ_CP062775.1 See Comparison
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NZ_CP062740.1 See Comparison
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CP073608.1 See Comparison
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CP073620.1 See Comparison
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CP073596.1 See Comparison
CP073598.1 See Comparison
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NZ_CP018248.1 See Comparison
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NZ_CP018246.1 See Comparison
NZ_CP018251.1 See Comparison
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NZ_CP028634.1 See Comparison
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NZ_CP028664.1 See Comparison
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NZ_CP145947.1 See Comparison
NZ_CP111099.1 See Comparison
NZ_CP140520.1 See Comparison
CP058234.1 See Comparison
NZ_CP038426.1 See Comparison
NZ_CP038301.1 See Comparison
NZ_CP038289.1 See Comparison
NZ_CP038422.1 See Comparison
NZ_CP038335.1 See Comparison
NZ_CP038420.1 See Comparison
NZ_CP038418.1 See Comparison
NZ_CP038404.1 See Comparison
NZ_CP038371.1 See Comparison
NZ_CP038356.1 See Comparison
NZ_CP038332.1 See Comparison
NZ_CP038286.1 See Comparison
NZ_CP038291.1 See Comparison
NZ_CP040108.1 See Comparison
NZ_CP038415.1 See Comparison
NZ_CP038401.1 See Comparison
NZ_CP038379.1 See Comparison
NZ_CP038368.1 See Comparison
NZ_CP038312.1 See Comparison
NZ_CP038308.1 See Comparison
NZ_CP038293.1 See Comparison
NZ_CP038283.1 See Comparison
NZ_CP038424.1 See Comparison
NZ_CP038362.1 See Comparison
NZ_CP038341.1 See Comparison
NZ_CP038320.1 See Comparison
NZ_CP038304.1 See Comparison
NZ_CP046526.1 See Comparison
NZ_CP114133.1 See Comparison
NZ_CP045976.1 See Comparison
NZ_CP035546.1 See Comparison
NZ_CP040310.1 See Comparison
NZ_CP040306.1 See Comparison
NZ_CP040312.1 See Comparison
NZ_CP040317.1 See Comparison
NZ_CP040315.1 See Comparison
NZ_CP040308.1 See Comparison
NZ_CP062714.1 See Comparison
NZ_CP062701.1 See Comparison
NZ_CP062779.1 See Comparison
NZ_CP062734.1 See Comparison
NZ_CP062726.1 See Comparison
NZ_CP062716.1 See Comparison
NZ_CP062703.1 See Comparison
NZ_CP062740.1 See Comparison
NZ_CP062728.1 See Comparison
NZ_CP062718.1 See Comparison
NZ_CP062706.1 See Comparison
NZ_CP062781.1 See Comparison
NZ_CP062730.1 See Comparison
NZ_CP062722.1 See Comparison
NZ_CP062720.1 See Comparison
NZ_CP062712.1 See Comparison
NZ_CP062709.1 See Comparison
CP051801.1 See Comparison
CP051799.1 See Comparison
CP051797.1 See Comparison
CP051795.1 See Comparison
CP051791.1 See Comparison
CP051789.1 See Comparison
CP051785.1 See Comparison
CP051781.1 See Comparison
CP051777.1 See Comparison
NZ_CP066750.1 See Comparison
NZ_CP062772.1 See Comparison
NZ_CP062770.1 See Comparison
NZ_CP062759.1 See Comparison
NZ_CP062762.1 See Comparison
NZ_CP062747.1 See Comparison
NZ_CP062745.1 See Comparison
NZ_CP062783.1 See Comparison
NZ_CP062756.1 See Comparison
NZ_CP062775.1 See Comparison
NZ_CP062764.1 See Comparison
NZ_CP062750.1 See Comparison
NZ_CP062743.1 See Comparison
NZ_CP062737.1 See Comparison
NZ_CP062767.1 See Comparison
NZ_CP062753.1 See Comparison
NZ_CP062732.1 See Comparison
CP051823.1 See Comparison
CP051820.1 See Comparison
CP051818.1 See Comparison
CP051815.1 See Comparison
CP051813.1 See Comparison
CP051810.1 See Comparison
CP051839.1 See Comparison
CP051807.1 See Comparison
CP051803.1 See Comparison
NZ_CP082836.1 See Comparison
NZ_AP026115.1 See Comparison
NZ_AP026109.1 See Comparison
NZ_AP026091.1 See Comparison
NZ_AP026081.1 See Comparison
NZ_AP026086.1 See Comparison
NZ_AP026117.1 See Comparison
NZ_AP026111.1 See Comparison
NZ_AP026100.1 See Comparison
NZ_AP026083.1 See Comparison
NZ_CP089273.1 See Comparison
NZ_CP104650.1 See Comparison
NZ_CP104648.1 See Comparison
NZ_CP089037.1 See Comparison
CP088063.1 See Comparison
CP088039.1 See Comparison
CP088068.1 See Comparison
CP088041.1 See Comparison
CP088045.1 See Comparison
CP088043.1 See Comparison
CP088049.1 See Comparison
CP088027.1 See Comparison
CP088051.1 See Comparison
CP088029.1 See Comparison
CP088053.1 See Comparison
CP088033.1 See Comparison
CP088055.1 See Comparison
CP088035.1 See Comparison
CP088072.1 See Comparison
CP088037.1 See Comparison
CP088059.1 See Comparison
CP088065.1 See Comparison
CP088061.1 See Comparison
CP088031.1 See Comparison
CP073592.1 See Comparison
NZ_CP076246.1 See Comparison
NZ_CP076244.1 See Comparison
NZ_CP076236.1 See Comparison
NZ_CP076234.1 See Comparison
CP073594.1 See Comparison
CP073596.1 See Comparison
CP073598.1 See Comparison
CP073600.1 See Comparison
CP073602.1 See Comparison
CP073605.1 See Comparison
CP073608.1 See Comparison
CP073610.1 See Comparison
CP073615.1 See Comparison
CP073618.1 See Comparison
CP073620.1 See Comparison
NZ_CP018253.1 See Comparison
NZ_CP018240.1 See Comparison
NZ_CP018242.1 See Comparison
NZ_CP018248.1 See Comparison
NZ_CP018244.1 See Comparison
NZ_CP018246.1 See Comparison
NZ_CP018251.1 See Comparison
NC_013010.1 See Comparison
NZ_CP016626.1 See Comparison
NZ_CP010305.1 See Comparison
NZ_CP015816.1 See Comparison
NC_011350.1 See Comparison
NZ_CP032804.1 See Comparison
NZ_CP032792.1 See Comparison
NZ_CP032809.1 See Comparison
NZ_CP032790.1 See Comparison
NZ_CP028679.1 See Comparison
NZ_CP040573.1 See Comparison
NZ_CP015854.1 See Comparison
NZ_CP028682.1 See Comparison
NZ_CP028658.1 See Comparison
NZ_CP028619.1 See Comparison
NZ_CP028670.1 See Comparison
NZ_CP028643.1 See Comparison
NZ_CP028628.1 See Comparison
NZ_CP028602.1 See Comparison
NZ_CP028667.1 See Comparison
NZ_CP028664.1 See Comparison
NZ_CP028622.1 See Comparison
NZ_CP028625.1 See Comparison
NZ_CP028673.1 See Comparison
NZ_CP034796.1 See Comparison
NZ_CP028676.1 See Comparison
NZ_CP028649.1 See Comparison
NZ_CP028631.1 See Comparison
NZ_CP028599.1 See Comparison
NZ_CP028646.1 See Comparison
NZ_CP028637.1 See Comparison
NZ_CP028634.1 See Comparison
NZ_CP028606.1 See Comparison
NZ_CP028597.1 See Comparison
NZ_CP028661.1 See Comparison
NZ_CP028640.1 See Comparison
NZ_CP028616.1 See Comparison
NZ_CP028595.1 See Comparison
NZ_CP034800.1 See Comparison
NZ_CP035367.1 See Comparison
NZ_CP015844.2 See Comparison
CP126907.1 See Comparison
NZ_CP015847.2 See Comparison
NZ_CP145947.1 See Comparison
NZ_CP145945.1 See Comparison
NZ_CP040108.1 See Comparison
NZ_CP111100.1 See Comparison
NZ_CP111099.1 See Comparison
NZ_CP140520.1 See Comparison
CP058232.1 See Comparison
CP058234.1 See Comparison
NZ_CP038379.1 See Comparison
NZ_CP038301.1 See Comparison
NZ_CP038335.1 See Comparison
NZ_CP038420.1 See Comparison
NZ_CP038368.1 See Comparison
NZ_CP038418.1 See Comparison
NZ_CP038289.1 See Comparison
NZ_CP038312.1 See Comparison
NZ_CP038422.1 See Comparison
NZ_CP038404.1 See Comparison
NZ_CP038308.1 See Comparison
NZ_CP038371.1 See Comparison
NZ_CP038293.1 See Comparison
NZ_CP038356.1 See Comparison
NZ_CP038283.1 See Comparison
NZ_CP038424.1 See Comparison
NZ_CP038362.1 See Comparison
NZ_CP038332.1 See Comparison
NZ_CP038341.1 See Comparison
NZ_CP038320.1 See Comparison
NZ_CP038286.1 See Comparison
NZ_CP038304.1 See Comparison
NZ_CP038426.1 See Comparison
NZ_CP038291.1 See Comparison
NZ_CP038415.1 See Comparison
NZ_CP040308.1 See Comparison
NZ_CP038401.1 See Comparison
NZ_CP066750.1 See Comparison
NZ_CP046526.1 See Comparison
NZ_CP062772.1 See Comparison
NZ_CP062770.1 See Comparison
NZ_CP062759.1 See Comparison
NZ_CP062762.1 See Comparison
NZ_CP062747.1 See Comparison
NZ_CP062745.1 See Comparison
NZ_CP062783.1 See Comparison
NZ_CP062756.1 See Comparison
NZ_CP062775.1 See Comparison
NZ_CP062764.1 See Comparison
NZ_CP062750.1 See Comparison
NZ_CP062743.1 See Comparison
NZ_CP062737.1 See Comparison
NZ_CP062767.1 See Comparison
NZ_CP062753.1 See Comparison
NZ_CP062732.1 See Comparison
CP051823.1 See Comparison
CP051820.1 See Comparison
CP051818.1 See Comparison
CP051815.1 See Comparison
CP051813.1 See Comparison
CP051810.1 See Comparison
CP051839.1 See Comparison
CP051807.1 See Comparison
CP051803.1 See Comparison
CP051801.1 See Comparison
CP051799.1 See Comparison
CP051797.1 See Comparison
CP051795.1 See Comparison
CP051791.1 See Comparison
NZ_CP045976.1 See Comparison
NZ_CP035546.1 See Comparison
NZ_CP040310.1 See Comparison
NZ_CP040306.1 See Comparison
NZ_CP040312.1 See Comparison
NZ_CP040317.1 See Comparison
NZ_CP040315.1 See Comparison
NZ_CP062714.1 See Comparison
NZ_CP062701.1 See Comparison
NZ_CP062779.1 See Comparison
NZ_CP062734.1 See Comparison
NZ_CP062726.1 See Comparison
NZ_CP062716.1 See Comparison
NZ_CP062703.1 See Comparison
NZ_CP062740.1 See Comparison
NZ_CP062728.1 See Comparison
NZ_CP062718.1 See Comparison
NZ_CP062706.1 See Comparison
NZ_CP062781.1 See Comparison
NZ_CP062730.1 See Comparison
NZ_CP062722.1 See Comparison
NZ_CP062720.1 See Comparison
NZ_CP062712.1 See Comparison
NZ_CP062709.1 See Comparison
CP051789.1 See Comparison
CP051785.1 See Comparison
CP051781.1 See Comparison
CP051777.1 See Comparison
NZ_CP114133.1 See Comparison
NZ_AP026083.1 See Comparison
NZ_AP026115.1 See Comparison
NZ_AP026109.1 See Comparison
NZ_CP104650.1 See Comparison
NZ_AP026091.1 See Comparison
NZ_AP026081.1 See Comparison
NZ_AP026086.1 See Comparison
NZ_AP026117.1 See Comparison
NZ_AP026111.1 See Comparison
NZ_AP026100.1 See Comparison
NZ_CP082836.1 See Comparison
NZ_CP104648.1 See Comparison
NZ_CP089273.1 See Comparison
CP088035.1 See Comparison
NZ_CP089037.1 See Comparison
CP088037.1 See Comparison
CP088065.1 See Comparison
CP088063.1 See Comparison
CP088039.1 See Comparison
CP088068.1 See Comparison
CP088041.1 See Comparison
CP088045.1 See Comparison
CP088027.1 See Comparison
CP088043.1 See Comparison
CP088029.1 See Comparison
CP088049.1 See Comparison
CP088033.1 See Comparison
CP088031.1 See Comparison
CP088051.1 See Comparison
CP088053.1 See Comparison
CP088055.1 See Comparison
CP088072.1 See Comparison
CP088059.1 See Comparison
CP088061.1 See Comparison
NZ_CP076234.1 See Comparison
NZ_CP076244.1 See Comparison
NZ_CP076236.1 See Comparison
NZ_CP076246.1 See Comparison
NZ_CP016626.1 See Comparison
CP073592.1 See Comparison
CP073594.1 See Comparison
CP073596.1 See Comparison
CP073598.1 See Comparison
CP073600.1 See Comparison
CP073602.1 See Comparison
CP073605.1 See Comparison
CP073608.1 See Comparison
CP073610.1 See Comparison
CP073618.1 See Comparison
CP073620.1 See Comparison
NZ_CP018251.1 See Comparison
NZ_CP015816.1 See Comparison
NZ_CP018253.1 See Comparison
NZ_CP018240.1 See Comparison
NZ_CP018242.1 See Comparison
NZ_CP018248.1 See Comparison
NZ_CP018244.1 See Comparison
NZ_CP018246.1 See Comparison
NZ_CP032792.1 See Comparison
NZ_CP010305.1 See Comparison
NC_013010.1 See Comparison
NC_011350.1 See Comparison
NZ_CP032790.1 See Comparison
NZ_CP032809.1 See Comparison
NZ_CP032804.1 See Comparison
NZ_CP040573.1 See Comparison
NZ_CP015854.1 See Comparison
NZ_CP028643.1 See Comparison
NZ_CP028628.1 See Comparison
NZ_CP028602.1 See Comparison
NZ_CP028667.1 See Comparison
NZ_CP028664.1 See Comparison
NZ_CP028606.1 See Comparison
NZ_CP028625.1 See Comparison
NZ_CP028622.1 See Comparison
NZ_CP028673.1 See Comparison
NZ_CP028676.1 See Comparison
NZ_CP028649.1 See Comparison
NZ_CP028679.1 See Comparison
NZ_CP028597.1 See Comparison
NZ_CP028682.1 See Comparison
NZ_CP028631.1 See Comparison
NZ_CP028661.1 See Comparison
NZ_CP028599.1 See Comparison
NZ_CP028646.1 See Comparison
NZ_CP028658.1 See Comparison
NZ_CP028619.1 See Comparison
NZ_CP028640.1 See Comparison
NZ_CP028670.1 See Comparison
NZ_CP028637.1 See Comparison
NZ_CP028616.1 See Comparison
NZ_CP028634.1 See Comparison
NZ_CP028595.1 See Comparison
NZ_CP035367.1 See Comparison
NZ_CP034796.1 See Comparison
NZ_CP034800.1 See Comparison
NZ_CP015847.2 See Comparison
NZ_CP015844.2 See Comparison
CP126907.1 See Comparison
NZ_CP145947.1 See Comparison
NZ_CP145945.1 See Comparison
NZ_CP040108.1 See Comparison
NZ_CP111099.1 See Comparison
NZ_CP140520.1 See Comparison
CP058232.1 See Comparison
CP058234.1 See Comparison
NZ_CP111100.1 See Comparison
NZ_CP038301.1 See Comparison
NZ_CP038335.1 See Comparison
NZ_CP038420.1 See Comparison
NZ_CP038418.1 See Comparison
NZ_CP038289.1 See Comparison
NZ_CP038404.1 See Comparison
NZ_CP038422.1 See Comparison
NZ_CP038371.1 See Comparison
NZ_CP038356.1 See Comparison
NZ_CP062772.1 See Comparison
NZ_CP038332.1 See Comparison
NZ_CP038286.1 See Comparison
NZ_CP038426.1 See Comparison
NZ_CP038415.1 See Comparison
NZ_CP038401.1 See Comparison
NZ_CP038379.1 See Comparison
NZ_CP046526.1 See Comparison
NZ_CP062759.1 See Comparison
NZ_CP062762.1 See Comparison
NZ_CP062747.1 See Comparison
NZ_CP062745.1 See Comparison
NZ_CP062783.1 See Comparison
NZ_CP062756.1 See Comparison
NZ_CP062775.1 See Comparison
NZ_CP062764.1 See Comparison
NZ_CP038368.1 See Comparison
NZ_CP038312.1 See Comparison
NZ_CP038308.1 See Comparison
NZ_CP038293.1 See Comparison
NZ_CP038283.1 See Comparison
NZ_CP038424.1 See Comparison
NZ_CP038362.1 See Comparison
NZ_CP038341.1 See Comparison
NZ_CP038320.1 See Comparison
NZ_CP038304.1 See Comparison
NZ_CP038291.1 See Comparison
NZ_CP045976.1 See Comparison
NZ_CP035546.1 See Comparison
NZ_CP040310.1 See Comparison
NZ_CP040306.1 See Comparison
NZ_CP040312.1 See Comparison
NZ_CP040317.1 See Comparison
NZ_CP040315.1 See Comparison
NZ_CP040308.1 See Comparison
NZ_CP062701.1 See Comparison
NZ_CP062779.1 See Comparison
NZ_CP062734.1 See Comparison
NZ_CP062770.1 See Comparison
NZ_CP062726.1 See Comparison
NZ_CP062750.1 See Comparison
CP051823.1 See Comparison
NZ_CP062743.1 See Comparison
NZ_CP062737.1 See Comparison
NZ_CP062767.1 See Comparison
NZ_CP062753.1 See Comparison
NZ_CP062732.1 See Comparison
NZ_CP062714.1 See Comparison
NZ_CP062716.1 See Comparison
NZ_CP062703.1 See Comparison
NZ_CP062740.1 See Comparison
NZ_CP062728.1 See Comparison
NZ_CP062718.1 See Comparison
NZ_CP062706.1 See Comparison
NZ_CP062781.1 See Comparison
NZ_CP062730.1 See Comparison
NZ_CP062722.1 See Comparison
NZ_CP062720.1 See Comparison
NZ_CP062712.1 See Comparison
NZ_CP062709.1 See Comparison
CP051820.1 See Comparison
CP051818.1 See Comparison
CP051815.1 See Comparison
CP051813.1 See Comparison
CP051810.1 See Comparison
CP051839.1 See Comparison
CP051807.1 See Comparison
CP051803.1 See Comparison
CP051801.1 See Comparison
CP051799.1 See Comparison
CP051797.1 See Comparison
CP051795.1 See Comparison
CP051791.1 See Comparison
CP051781.1 See Comparison
CP051789.1 See Comparison
CP051777.1 See Comparison
CP051785.1 See Comparison
NZ_AP026081.1 See Comparison
NZ_CP066750.1 See Comparison
NZ_CP114133.1 See Comparison
NZ_AP026086.1 See Comparison
NZ_AP026091.1 See Comparison
NZ_AP026083.1 See Comparison
NZ_AP026115.1 See Comparison
NZ_AP026109.1 See Comparison
NZ_CP104650.1 See Comparison
NZ_AP026117.1 See Comparison
NZ_AP026111.1 See Comparison
NZ_AP026100.1 See Comparison
NZ_CP082836.1 See Comparison
NZ_CP104648.1 See Comparison


Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore