Plasmid NZ_CP029386.1

Sequence

Nucleotide Information

Accession	NZ_CP029386.1
Description	Klebsiella pneumoniae subsp. pneumoniae strain SCKP040074 plasmid pNDM6_040074, complete sequence
Source	refseq
Topology	circular
Length	52989 bp
GC Content	0.49 %
Created at NCBI	May 15, 2018

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (72407)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_003037615.2
Assembly Coverage	200

Biosample

Curated Collection Information

Accession	8027262

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	China,Sichuan
Original Query Type	name
Coordinates (Lat/Lon)	30.50/102.50
Address	China,Sichuan

ECOSYSTEM

Original Query	Homo sapiens,Pure Culture
Classification	cell_culture,host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

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NZ_CP149133.1	See Comparison
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NZ_MK372382.1	See Comparison
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NZ_MK372383.1	See Comparison
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NZ_MH909342.1	See Comparison
NZ_MH909347.1	See Comparison
NZ_MH909343.1	See Comparison
NZ_MH917283.1	See Comparison
NZ_MH909335.1	See Comparison
NZ_MH909346.1	See Comparison
NZ_MH909333.1	See Comparison
NZ_MH349095.1	See Comparison
NZ_MH917282.1	See Comparison
NZ_MH234505.1	See Comparison
NZ_MF344560.1	See Comparison
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NZ_KX470734.1	See Comparison
NZ_MF072961.1	See Comparison
NZ_KY978629.1	See Comparison
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NZ_CP046274.1	See Comparison
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NZ_KR059865.1	See Comparison
NZ_CP039811.1	See Comparison
NZ_CP116218.1	See Comparison
NZ_MW269623.1	See Comparison
NZ_MN061454.1	See Comparison
NZ_MN937240.1	See Comparison
NZ_MN178638.1	See Comparison
CP046892.1	See Comparison
NZ_CP104795.1	See Comparison
NZ_CP114575.1	See Comparison
NZ_ON209125.1	See Comparison
NZ_ON209133.1	See Comparison
NZ_ON209142.1	See Comparison
NZ_ON209132.1	See Comparison
NZ_ON209124.1	See Comparison
NZ_ON209139.1	See Comparison
NZ_ON209150.1	See Comparison
NZ_ON209126.1	See Comparison
NZ_ON209123.1	See Comparison
NZ_CP103970.1	See Comparison
NZ_ON209137.1	See Comparison
NZ_ON209134.1	See Comparison
NZ_CP088226.1	See Comparison
NZ_CP103366.1	See Comparison
NZ_CP101780.1	See Comparison
NZ_CP101550.1	See Comparison
NZ_CP053694.1	See Comparison
NZ_CP053646.1	See Comparison
NZ_CP088232.1	See Comparison
NZ_CP090129.1	See Comparison
NZ_CP043582.1	See Comparison
NZ_CP092495.1	See Comparison
NZ_CP091980.1	See Comparison
NZ_CP084105.1	See Comparison
NZ_CP082900.1	See Comparison
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NZ_CP037965.1	See Comparison
NZ_CP030299.1	See Comparison
NC_025130.1	See Comparison
NC_023914.1	See Comparison
NC_020811.1	See Comparison
NC_019162.1	See Comparison
CP034323.1	See Comparison
NZ_CP028786.2	See Comparison
NZ_CP138836.1	See Comparison
NZ_CP055250.1	See Comparison
NZ_CP155123.1	See Comparison
NZ_CP152423.1	See Comparison
NZ_CP151755.1	See Comparison
NZ_CP151761.1	See Comparison
NZ_CP151758.1	See Comparison
NZ_CP149133.1	See Comparison
NZ_CP149944.1	See Comparison
NZ_CP127522.1	See Comparison
NZ_CP139934.1	See Comparison
NZ_CP136604.1	See Comparison
NZ_CP139395.1	See Comparison
NZ_CP139381.1	See Comparison
NZ_CP050158.1	See Comparison
NZ_CP050161.1	See Comparison
NZ_CP137176.1	See Comparison
NZ_CP137186.1	See Comparison
NZ_CP137167.1	See Comparison
NZ_CP137129.1	See Comparison
NZ_CP137124.1	See Comparison
NZ_CP133344.1	See Comparison
NZ_OQ338158.1	See Comparison
NZ_CP058664.1	See Comparison
NZ_MK372382.1	See Comparison
NZ_MK372380.1	See Comparison
NZ_MK372383.1	See Comparison
NZ_MK372387.1	See Comparison
NZ_MH909342.1	See Comparison
NZ_MK372381.1	See Comparison
NZ_MH917282.1	See Comparison
NZ_MK372386.1	See Comparison
NZ_MH234505.1	See Comparison
NZ_MH349095.1	See Comparison
NZ_MH909347.1	See Comparison
NZ_MH909343.1	See Comparison
NZ_MF072961.1	See Comparison
NZ_MH917283.1	See Comparison
NZ_MH909335.1	See Comparison
NZ_MH909346.1	See Comparison
NZ_MH909333.1	See Comparison
NZ_MF344560.1	See Comparison
NZ_MG252893.1	See Comparison
NZ_KY978629.1	See Comparison
NZ_KY296103.1	See Comparison
NZ_KX470734.1	See Comparison
NZ_KP987216.1	See Comparison
NZ_KX094555.1	See Comparison
NZ_KU314941.1	See Comparison
NZ_KR059865.1	See Comparison
NZ_MN937240.1	See Comparison
NZ_CP039811.1	See Comparison
NZ_CP046274.1	See Comparison
NZ_MW269623.1	See Comparison
NZ_MN178638.1	See Comparison
NZ_CP114575.1	See Comparison
NZ_MN061454.1	See Comparison
CP046892.1	See Comparison
NZ_CP116218.1	See Comparison
NZ_ON209133.1	See Comparison
NZ_CP104795.1	See Comparison
NZ_ON209142.1	See Comparison
NZ_ON209124.1	See Comparison
NZ_ON209139.1	See Comparison
NZ_ON209126.1	See Comparison
NZ_ON209137.1	See Comparison
NZ_ON209134.1	See Comparison
NZ_ON209125.1	See Comparison
NZ_CP103366.1	See Comparison
NZ_ON209132.1	See Comparison
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NZ_CP101780.1	See Comparison
NZ_MZ156801.1	See Comparison
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NZ_CP043582.1	See Comparison
NZ_CP091980.1	See Comparison
NZ_CP088226.1	See Comparison
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NZ_CP088232.1	See Comparison
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NZ_CP090129.1	See Comparison
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NZ_CP030299.1	See Comparison
NC_020811.1	See Comparison
NC_025130.1	See Comparison
NZ_CP037965.1	See Comparison
NC_019162.1	See Comparison
NZ_CP028786.2	See Comparison
NZ_CP137176.1	See Comparison
NZ_CP138836.1	See Comparison
CP034323.1	See Comparison
NZ_CP137186.1	See Comparison
NZ_CP137167.1	See Comparison
NZ_CP137129.1	See Comparison
NZ_CP137124.1	See Comparison
NZ_CP151755.1	See Comparison
NZ_OQ338158.1	See Comparison
NZ_CP155123.1	See Comparison
NZ_CP133344.1	See Comparison
NZ_CP152423.1	See Comparison
NZ_CP151761.1	See Comparison
NZ_CP151758.1	See Comparison
NZ_CP136604.1	See Comparison
NZ_CP149133.1	See Comparison
NZ_CP149944.1	See Comparison
NZ_CP127522.1	See Comparison
NZ_MK372381.1	See Comparison
NZ_CP050158.1	See Comparison
NZ_CP050161.1	See Comparison
NZ_CP055250.1	See Comparison
NZ_CP139934.1	See Comparison
NZ_CP139395.1	See Comparison
NZ_CP139381.1	See Comparison
NZ_CP058664.1	See Comparison
NZ_MK372382.1	See Comparison
NZ_MK372380.1	See Comparison
NZ_MK372383.1	See Comparison
NZ_MK372387.1	See Comparison
NZ_MH909347.1	See Comparison
NZ_MH349095.1	See Comparison
NZ_MK372386.1	See Comparison
NZ_MH909343.1	See Comparison
NZ_MH917283.1	See Comparison
NZ_MH909335.1	See Comparison
NZ_MH909346.1	See Comparison
NZ_MH909333.1	See Comparison
NZ_KX470734.1	See Comparison
NZ_MF344560.1	See Comparison
NZ_MH909342.1	See Comparison
NZ_MH917282.1	See Comparison
NZ_MH234505.1	See Comparison
NZ_MG252893.1	See Comparison
NZ_KX094555.1	See Comparison
NZ_MF072961.1	See Comparison
NZ_KY978629.1	See Comparison
NZ_KY296103.1	See Comparison
NZ_KU314941.1	See Comparison
NZ_MN937240.1	See Comparison
NZ_KP987216.1	See Comparison
NZ_KR059865.1	See Comparison
NZ_CP039811.1	See Comparison
NZ_CP046274.1	See Comparison
NZ_MW269623.1	See Comparison
NZ_MN178638.1	See Comparison
NZ_MN061454.1	See Comparison
NZ_CP116218.1	See Comparison
CP046892.1	See Comparison
NZ_CP114575.1	See Comparison
NZ_CP103366.1	See Comparison
NZ_ON209132.1	See Comparison
NZ_ON209150.1	See Comparison
NZ_ON209123.1	See Comparison
NZ_ON209133.1	See Comparison
NZ_ON209142.1	See Comparison
NZ_ON209124.1	See Comparison
NZ_ON209139.1	See Comparison
NZ_ON209126.1	See Comparison
NZ_ON209137.1	See Comparison
NZ_ON209134.1	See Comparison
NZ_CP103970.1	See Comparison
NZ_CP104795.1	See Comparison
NZ_ON209125.1	See Comparison
NZ_CP053694.1	See Comparison
NZ_CP101780.1	See Comparison
NZ_CP101550.1	See Comparison
NZ_CP088226.1	See Comparison
NZ_CP053646.1	See Comparison
NZ_CP088232.1	See Comparison
NZ_CP084105.1	See Comparison
NZ_CP043582.1	See Comparison
NZ_CP092495.1	See Comparison
NZ_CP091980.1	See Comparison
NZ_CP090129.1	See Comparison
NZ_MZ156801.1	See Comparison
NZ_CP082900.1	See Comparison
NZ_CP080473.1	See Comparison
NZ_CP076461.1	See Comparison
NC_025130.1	See Comparison
NZ_CP030299.1	See Comparison
NC_019162.1	See Comparison
NC_023914.1	See Comparison
NZ_CP037965.1	See Comparison
NC_020811.1	See Comparison
NZ_CP028786.2	See Comparison
CP034323.1	See Comparison
NZ_CP138836.1	See Comparison
NZ_CP029386.1	See Comparison
NZ_CP137176.1	See Comparison
NZ_CP137186.1	See Comparison
NZ_CP137167.1	See Comparison
NZ_CP137129.1	See Comparison
NZ_CP137124.1	See Comparison
NZ_CP133344.1	See Comparison
NZ_CP155123.1	See Comparison
NZ_OQ338158.1	See Comparison
NZ_CP149944.1	See Comparison
NZ_CP152423.1	See Comparison
NZ_CP151755.1	See Comparison
NZ_CP151761.1	See Comparison
NZ_CP151758.1	See Comparison
NZ_CP149133.1	See Comparison
NZ_CP139381.1	See Comparison
NZ_CP127522.1	See Comparison
NZ_CP139934.1	See Comparison
NZ_CP136604.1	See Comparison
NZ_CP050158.1	See Comparison
NZ_CP139395.1	See Comparison
NZ_CP058664.1	See Comparison
NZ_CP050161.1	See Comparison
NZ_CP055250.1	See Comparison
NZ_MK372381.1	See Comparison
NZ_MK372382.1	See Comparison
NZ_MK372386.1	See Comparison
NZ_MH349095.1	See Comparison
NZ_MK372387.1	See Comparison
NZ_MK372380.1	See Comparison
NZ_MK372383.1	See Comparison
NZ_MH917282.1	See Comparison
NZ_MH234505.1	See Comparison
NZ_MH909347.1	See Comparison
NZ_MH909342.1	See Comparison
NZ_MH909343.1	See Comparison
NZ_MH917283.1	See Comparison
NZ_MH909335.1	See Comparison
NZ_MH909346.1	See Comparison
NZ_MH909333.1	See Comparison
NZ_KX470734.1	See Comparison
NZ_MF344560.1	See Comparison
NZ_MF072961.1	See Comparison
NZ_KY978629.1	See Comparison
NZ_KY296103.1	See Comparison
NZ_MG252893.1	See Comparison
NZ_KX094555.1	See Comparison
NZ_KP987216.1	See Comparison
NZ_KR059865.1	See Comparison
NZ_KU314941.1	See Comparison
NZ_MW269623.1	See Comparison
NZ_CP039811.1	See Comparison
NZ_CP046274.1	See Comparison
NZ_MN178638.1	See Comparison
NZ_MN937240.1	See Comparison
NZ_CP116218.1	See Comparison
NZ_MN061454.1	See Comparison
CP046892.1	See Comparison
NZ_ON209125.1	See Comparison
NZ_CP114575.1	See Comparison
NZ_ON209132.1	See Comparison
NZ_ON209150.1	See Comparison
NZ_CP104795.1	See Comparison
NZ_ON209123.1	See Comparison
NZ_ON209133.1	See Comparison
NZ_ON209142.1	See Comparison
NZ_ON209124.1	See Comparison
NZ_ON209134.1	See Comparison
NZ_ON209139.1	See Comparison
NZ_ON209126.1	See Comparison
NZ_ON209137.1	See Comparison
NZ_CP103970.1	See Comparison
NZ_CP101780.1	See Comparison
NZ_CP103366.1	See Comparison
NZ_CP043582.1	See Comparison
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NZ_CP053646.1	See Comparison
NZ_CP088232.1	See Comparison
NZ_CP092495.1	See Comparison
NZ_CP091980.1	See Comparison
NZ_CP090129.1	See Comparison
NZ_CP084105.1	See Comparison
NZ_CP030299.1	See Comparison
NZ_CP082900.1	See Comparison
NZ_CP080473.1	See Comparison
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NZ_CP076461.1	See Comparison
NC_020811.1	See Comparison
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NC_023914.1	See Comparison
NC_019162.1	See Comparison
NZ_CP028786.2	See Comparison
NZ_CP037965.1	See Comparison
CP034323.1	See Comparison
NZ_CP138836.1	See Comparison
NZ_CP137176.1	See Comparison
NZ_CP137186.1	See Comparison
NZ_CP137167.1	See Comparison
NZ_CP137129.1	See Comparison
NZ_CP137124.1	See Comparison
NZ_CP133344.1	See Comparison
NZ_OQ338158.1	See Comparison
NZ_CP151755.1	See Comparison
NZ_CP152423.1	See Comparison
NZ_CP155123.1	See Comparison
NZ_CP151761.1	See Comparison
NZ_CP151758.1	See Comparison
NZ_CP149133.1	See Comparison
NZ_CP127522.1	See Comparison
NZ_CP149944.1	See Comparison
NZ_CP139934.1	See Comparison
NZ_CP139395.1	See Comparison
NZ_CP136604.1	See Comparison
NZ_CP139381.1	See Comparison
NZ_CP055250.1	See Comparison
NZ_CP050161.1	See Comparison
NZ_CP050158.1	See Comparison
NZ_CP058664.1	See Comparison
NZ_MK372386.1	See Comparison
NZ_MK372381.1	See Comparison
NZ_MK372382.1	See Comparison
NZ_MH349095.1	See Comparison
NZ_MK372380.1	See Comparison
NZ_MK372383.1	See Comparison
NZ_MK372387.1	See Comparison
NZ_MH909342.1	See Comparison
NZ_MH234505.1	See Comparison
NZ_MH909347.1	See Comparison
NZ_MH909343.1	See Comparison
NZ_MH917282.1	See Comparison
NZ_MH917283.1	See Comparison
NZ_MH909335.1	See Comparison
NZ_MH909346.1	See Comparison
NZ_MH909333.1	See Comparison
NZ_MF344560.1	See Comparison
NZ_MF072961.1	See Comparison
NZ_KX470734.1	See Comparison
NZ_MG252893.1	See Comparison
NZ_KY978629.1	See Comparison
NZ_KY296103.1	See Comparison
NZ_KP987216.1	See Comparison
NZ_KX094555.1	See Comparison
NZ_KU314941.1	See Comparison
NZ_KR059865.1	See Comparison
NZ_CP046274.1	See Comparison
NZ_CP039811.1	See Comparison
NZ_MW269623.1	See Comparison
NZ_MN937240.1	See Comparison
NZ_MN178638.1	See Comparison
CP046892.1	See Comparison
NZ_MN061454.1	See Comparison
NZ_CP114575.1	See Comparison
NZ_CP116218.1	See Comparison
NZ_CP104795.1	See Comparison
NZ_ON209125.1	See Comparison
NZ_ON209134.1	See Comparison
NZ_ON209132.1	See Comparison
NZ_ON209150.1	See Comparison
NZ_ON209123.1	See Comparison
NZ_ON209133.1	See Comparison
NZ_ON209142.1	See Comparison
NZ_CP103366.1	See Comparison
NZ_ON209124.1	See Comparison
NZ_ON209139.1	See Comparison
NZ_ON209126.1	See Comparison
NZ_ON209137.1	See Comparison
NZ_CP103970.1	See Comparison
NZ_CP101780.1	See Comparison
NZ_CP101550.1	See Comparison
NZ_CP090129.1	See Comparison
NZ_CP053694.1	See Comparison
NZ_CP088226.1	See Comparison
NZ_CP053646.1	See Comparison
NZ_CP088232.1	See Comparison
NZ_CP043582.1	See Comparison
NZ_CP092495.1	See Comparison
NZ_CP091980.1	See Comparison
NZ_CP082900.1	See Comparison
NZ_CP084105.1	See Comparison
NZ_CP080473.1	See Comparison
NZ_CP030299.1	See Comparison
NZ_MZ156801.1	See Comparison
NZ_CP076461.1	See Comparison
NC_020811.1	See Comparison
NC_025130.1	See Comparison
NC_023914.1	See Comparison
NC_019162.1	See Comparison
NZ_CP037965.1	See Comparison
NZ_CP127522.1	See Comparison
CP034323.1	See Comparison
NZ_CP028786.2	See Comparison
NZ_CP138836.1	See Comparison
NZ_CP137176.1	See Comparison
NZ_CP137186.1	See Comparison
NZ_CP137167.1	See Comparison
NZ_CP137129.1	See Comparison
NZ_CP137124.1	See Comparison
NZ_CP155123.1	See Comparison
NZ_CP151755.1	See Comparison
NZ_CP151761.1	See Comparison
NZ_CP151758.1	See Comparison
NZ_CP149133.1	See Comparison
NZ_CP149944.1	See Comparison
NZ_CP133344.1	See Comparison
NZ_OQ338158.1	See Comparison
NZ_CP152423.1	See Comparison
NZ_CP139934.1	See Comparison
NZ_CP136604.1	See Comparison
NZ_CP139395.1	See Comparison
NZ_CP050158.1	See Comparison
NZ_CP139381.1	See Comparison
NZ_MK372386.1	See Comparison
NZ_CP050161.1	See Comparison
NZ_CP058664.1	See Comparison
NZ_CP055250.1	See Comparison
NZ_MK372381.1	See Comparison
NZ_MK372382.1	See Comparison
NZ_MK372380.1	See Comparison
NZ_MK372383.1	See Comparison
NZ_MK372387.1	See Comparison
NZ_MH234505.1	See Comparison
NZ_MH909347.1	See Comparison
NZ_MH349095.1	See Comparison
NZ_MH909343.1	See Comparison
NZ_MH917283.1	See Comparison
NZ_MH909342.1	See Comparison
NZ_MH909335.1	See Comparison
NZ_MH909346.1	See Comparison
NZ_MH909333.1	See Comparison
NZ_MF344560.1	See Comparison
NZ_MH917282.1	See Comparison
NZ_MG252893.1	See Comparison
NZ_KX470734.1	See Comparison
NZ_MF072961.1	See Comparison
NZ_KY978629.1	See Comparison
NZ_KY296103.1	See Comparison
NZ_KX094555.1	See Comparison
NZ_KU314941.1	See Comparison
NZ_KP987216.1	See Comparison
NZ_KR059865.1	See Comparison
NZ_MW269623.1	See Comparison
NZ_CP046274.1	See Comparison
NZ_MN178638.1	See Comparison
NZ_CP039811.1	See Comparison
NZ_CP116218.1	See Comparison
NZ_MN937240.1	See Comparison
NZ_MN061454.1	See Comparison
CP046892.1	See Comparison
NZ_CP104795.1	See Comparison
NZ_CP114575.1	See Comparison
NZ_ON209125.1	See Comparison
NZ_ON209132.1	See Comparison
NZ_ON209150.1	See Comparison
NZ_ON209123.1	See Comparison
NZ_ON209133.1	See Comparison
NZ_ON209142.1	See Comparison
NZ_ON209124.1	See Comparison
NZ_ON209139.1	See Comparison
NZ_ON209126.1	See Comparison
NZ_ON209137.1	See Comparison
NZ_ON209134.1	See Comparison
NZ_CP101780.1	See Comparison
NZ_CP103970.1	See Comparison
NZ_CP103366.1	See Comparison
NZ_CP101550.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore