Plasmid NZ_AP022153.1

Sequence

Nucleotide Information

Accession	NZ_AP022153.1
Description	Klebsiella quasipneumoniae strain WP5-S18-ESBL-05 plasmid pWP5-S18-ESBL-05_11, complete sequence
Source	refseq
Topology	circular
Length	3071 bp
GC Content	0.48 %
Created at NCBI	Aug. 13, 2020

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella quasipneumoniae (1463165)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_quasipneumoniae (1463165)
Strain

Assembly

Genome Data Information

Accession	GCF_014169355.1
Assembly Coverage	195

Biosample

Curated Collection Information

Accession	15592056

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	35.6538N;139.5126E
Original Query Type	coordinates
Coordinates (Lat/Lon)	35.65/139.51
Address	多摩川サイクリングロード, Oshitatecho 5-chome, Fuchu, Tokyo, 206-0811, Japan

ECOSYSTEM

Original Query	None
Classification	None
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

CP082448.1	See Comparison
CP082481.1	See Comparison
CP082477.1	See Comparison
NC_019084.1	See Comparison
NC_013782.1	See Comparison
CP043749.1	See Comparison
CP043760.1	See Comparison
CP043756.1	See Comparison
CP119513.1	See Comparison
CP057009.1	See Comparison
NZ_KY991369.1	See Comparison
NZ_CP069577.1	See Comparison
CP066334.1	See Comparison
NZ_AP022153.1	See Comparison
CP123710.1	See Comparison
CP082379.2	See Comparison
NZ_AP027518.1	See Comparison
NZ_AP027482.1	See Comparison
NZ_CP141741.1	See Comparison
NC_019084.1	See Comparison
NZ_CP101909.1	See Comparison
NZ_CP101942.1	See Comparison
CP082448.1	See Comparison
CP082481.1	See Comparison
CP082477.1	See Comparison
CP066334.1	See Comparison
NC_013782.1	See Comparison
CP043749.1	See Comparison
CP043760.1	See Comparison
CP043756.1	See Comparison
CP123710.1	See Comparison
CP082379.2	See Comparison
NZ_AP027518.1	See Comparison
NZ_AP027482.1	See Comparison
NZ_CP141741.1	See Comparison
CP057009.1	See Comparison
NZ_KY991369.1	See Comparison
NZ_CP069577.1	See Comparison
CP082448.1	See Comparison
CP119513.1	See Comparison
NZ_CP101909.1	See Comparison
NZ_CP101942.1	See Comparison
CP082481.1	See Comparison
CP082477.1	See Comparison
NC_019084.1	See Comparison
NZ_CP069577.1	See Comparison
NC_013782.1	See Comparison
CP043749.1	See Comparison
CP043760.1	See Comparison
CP043756.1	See Comparison
CP123710.1	See Comparison
CP082379.2	See Comparison
NZ_AP027518.1	See Comparison
NZ_AP027482.1	See Comparison
NZ_CP141741.1	See Comparison
CP057009.1	See Comparison
NZ_KY991369.1	See Comparison
CP119513.1	See Comparison
CP066334.1	See Comparison
NZ_CP101909.1	See Comparison
NZ_CP101942.1	See Comparison
CP082448.1	See Comparison
CP082481.1	See Comparison
CP082477.1	See Comparison
CP057009.1	See Comparison
NC_019084.1	See Comparison
NC_013782.1	See Comparison
CP043749.1	See Comparison
CP043760.1	See Comparison
CP043756.1	See Comparison
CP123710.1	See Comparison
CP082379.2	See Comparison
NZ_AP027518.1	See Comparison
NZ_AP027482.1	See Comparison
NZ_CP141741.1	See Comparison
NZ_KY991369.1	See Comparison
CP066334.1	See Comparison
NZ_CP069577.1	See Comparison
NC_013782.1	See Comparison
CP119513.1	See Comparison
NZ_CP101909.1	See Comparison
NZ_CP101942.1	See Comparison
CP082448.1	See Comparison
CP082481.1	See Comparison
CP082477.1	See Comparison
NC_019084.1	See Comparison
CP082379.2	See Comparison
CP043749.1	See Comparison
CP043760.1	See Comparison
CP043756.1	See Comparison
CP123710.1	See Comparison
NZ_CP069577.1	See Comparison
CP057009.1	See Comparison
NZ_KY991369.1	See Comparison
NZ_AP027518.1	See Comparison
NZ_AP027482.1	See Comparison
NZ_CP141741.1	See Comparison
CP119513.1	See Comparison
CP066334.1	See Comparison
NZ_CP101909.1	See Comparison
NZ_CP101942.1	See Comparison
CP082448.1	See Comparison
CP082481.1	See Comparison
CP082477.1	See Comparison
NC_019084.1	See Comparison
CP043749.1	See Comparison
NC_013782.1	See Comparison
CP043760.1	See Comparison
CP043756.1	See Comparison
CP082379.2	See Comparison
CP123710.1	See Comparison
CP066334.1	See Comparison
NZ_AP027518.1	See Comparison
NZ_AP027482.1	See Comparison
NZ_CP141741.1	See Comparison
NZ_CP069577.1	See Comparison
CP057009.1	See Comparison
NZ_KY991369.1	See Comparison
NZ_CP101909.1	See Comparison
NZ_CP101942.1	See Comparison
CP119513.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore