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v. 2024_05_31_v2
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Similar Plasmids
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Antimicrobial Resistance Genes
Typing
Plasmid OW969649.1
Sequence
Nucleotide Information
Accession
OW969649.1
Description
Klebsiella pneumoniae isolate 307 genome assembly, plasmid: P1
Source
insd
Topology
circular
Length
221878 bp
GC Content
0.52 %
Created at NCBI
May 20, 2022
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Assembly
Genome Data Information
Accession
GCA_905333905.2
Assembly Coverage
317
Biosample
Curated Collection Information
Accession
22316942
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
Spain
Original Query Type
name
Coordinates (Lat/Lon)
39.33/-4.84
Address
Spain
ECOSYSTEM
Original Query
Homo sapiens,Hospital Universitario Ramon y Cajal (Madrid)
Classification
anthropogenic,hospital,host_associated,location
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
diseased
DOID/SYMP
Disease
(
DOID:4
)
A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
Visualization
PNG
JSON
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Plasmids from same Biosample
OW969652.1
OW969651.1
OW969650.1
Similar Plasmids
based on Mash distance
NZ_LR890572.1
See Comparison
NZ_CP097412.1
See Comparison
NZ_CP097416.1
See Comparison
OW969649.1
See Comparison
NZ_CP133845.1
See Comparison
CP024516.1
See Comparison
NZ_LR890572.1
See Comparison
CP146574.1
See Comparison
CP024516.1
See Comparison
NZ_CP097412.1
See Comparison
NZ_CP097416.1
See Comparison
NZ_CP133845.1
See Comparison
NZ_CP133845.1
See Comparison
CP024516.1
See Comparison
CP146574.1
See Comparison
NZ_LR890572.1
See Comparison
NZ_CP097412.1
See Comparison
NZ_CP097416.1
See Comparison
NZ_LR890572.1
See Comparison
CP146574.1
See Comparison
NZ_LR890572.1
See Comparison
NZ_CP097412.1
See Comparison
NZ_CP097416.1
See Comparison
CP024516.1
See Comparison
NZ_CP133845.1
See Comparison
CP146574.1
See Comparison
CP024516.1
See Comparison
NZ_CP097412.1
See Comparison
NZ_CP097416.1
See Comparison
CP146574.1
See Comparison
NZ_CP097412.1
See Comparison
NZ_CP097416.1
See Comparison
CP146574.1
See Comparison
NZ_CP133845.1
See Comparison
NZ_LR890572.1
See Comparison
CP024516.1
See Comparison
NZ_CP133845.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore