Plasmid NZ_OP331339.1

Sequence

Nucleotide Information

Accession NZ_OP331339.1
Description Escherichia coli strain PFEEC0089 plasmid unnamed, complete sequence
Source refseq
Topology linear
Length 133619 bp
GC Content 0.49 %
Created at NCBI March 11, 2024





Similar Plasmids

based on Mash distance

NZ_OP331339.1 See Comparison
NZ_MT263755.1 See Comparison
NZ_CP098208.1 See Comparison
CP088741.1 See Comparison
NZ_CP033091.2 See Comparison
CP088425.1 See Comparison
NC_011747.1 See Comparison
NZ_CP020546.1 See Comparison
NZ_CP026854.1 See Comparison
NZ_CP098208.1 See Comparison
NZ_CP082086.1 See Comparison
NZ_MT263755.1 See Comparison
NC_011747.1 See Comparison
CP088741.1 See Comparison
CP088425.1 See Comparison
NZ_CP033091.2 See Comparison
NZ_CP020546.1 See Comparison
NC_011747.1 See Comparison
NZ_CP098208.1 See Comparison
NZ_CP026854.1 See Comparison
NZ_CP082086.1 See Comparison
NZ_MT263755.1 See Comparison
CP088741.1 See Comparison
CP088425.1 See Comparison
NZ_CP026854.1 See Comparison
NZ_CP020546.1 See Comparison
NZ_CP033091.2 See Comparison
NZ_CP082086.1 See Comparison
NZ_MT263755.1 See Comparison
NZ_CP098208.1 See Comparison
CP088741.1 See Comparison
CP088425.1 See Comparison
NC_011747.1 See Comparison
NZ_CP026854.1 See Comparison
NZ_CP020546.1 See Comparison
NZ_CP033091.2 See Comparison
CP088425.1 See Comparison
NZ_CP098208.1 See Comparison
NZ_CP082086.1 See Comparison
NZ_MT263755.1 See Comparison
NZ_CP020546.1 See Comparison
CP088741.1 See Comparison
NC_011747.1 See Comparison
NZ_CP026854.1 See Comparison
NZ_CP033091.2 See Comparison
NZ_CP098208.1 See Comparison
NZ_CP082086.1 See Comparison
NZ_MT263755.1 See Comparison
CP088741.1 See Comparison
CP088425.1 See Comparison
NC_011747.1 See Comparison
NZ_CP020546.1 See Comparison
NZ_CP033091.2 See Comparison
NZ_CP082086.1 See Comparison
NZ_CP026854.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore