PLSDB
v. 2024_05_31_v2
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Typing
Plasmid NZ_MK172815.1
Sequence
Nucleotide Information
Accession
NZ_MK172815.1
Description
Escherichia coli plasmid pMCR-1_Msc, complete sequence
Source
refseq
Topology
circular
Length
33310 bp
GC Content
0.42 %
Created at NCBI
July 31, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (562)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Biosample
Curated Collection Information
Accession
14227925
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
Russia
Original Query Type
name
Coordinates (Lat/Lon)
64.69/97.75
Address
Russia
ECOSYSTEM
Original Query
Homo sapiens male,bal
Classification
host_associated
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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NZ_MW999355.1
See Comparison
NZ_MT316509.1
See Comparison
NZ_MW999352.1
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NZ_MW999354.1
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NZ_MW999356.1
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NZ_CP032076.1
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NZ_CP069661.1
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NZ_CP053212.1
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NZ_CP072316.1
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NZ_CP069695.1
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NZ_CP069650.1
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NZ_CP069680.1
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NZ_CP069669.1
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NZ_CP069685.1
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NZ_CP019908.1
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NZ_CP037906.1
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NZ_CP033349.2
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NZ_CP038181.1
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NZ_OR753269.1
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NZ_CP034833.1
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NZ_CP030795.1
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NZ_LT838201.1
See Comparison
NZ_CP028174.1
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NZ_CP028167.1
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NZ_CP024132.1
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NZ_CP024149.1
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NZ_OR724983.1
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NZ_OR753270.1
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NZ_OR724980.1
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NZ_OR724988.1
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NZ_OR724972.1
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NZ_OR724981.1
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NZ_OR724982.1
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AP027894.1
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AP027810.1
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NZ_CP133915.1
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NZ_CP136002.1
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NZ_CP135249.1
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NZ_OM735817.1
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NZ_CP135280.1
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NZ_OM735815.1
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NZ_OM735814.1
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NZ_OM735813.1
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NZ_OM735816.1
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NZ_OM735812.1
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NZ_AP027975.1
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NZ_CP065064.1
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NZ_AP027982.1
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NZ_AP027962.1
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NZ_AP027955.1
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NZ_OQ557085.1
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NZ_AP027959.1
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NZ_CP124870.1
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NZ_CP110172.1
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NZ_CP104609.1
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NZ_CP064013.1
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NZ_CP125358.1
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NZ_CP134089.1
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OZ026883.1
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OZ026882.1
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OZ026879.1
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OZ026878.1
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OZ026875.1
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OZ026874.1
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OZ026873.1
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NZ_MK477615.1
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NZ_AP027777.1
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NZ_AP027817.1
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NZ_AP027858.1
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NZ_CP139890.1
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NZ_CP139894.1
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NZ_OR828567.1
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NZ_CP059291.1
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NZ_AP018411.1
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NZ_LC479086.1
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NZ_LC477138.1
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NZ_LC479085.1
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NZ_LC477294.1
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NZ_LC227558.1
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NZ_MK477604.1
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NZ_MK477610.1
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NZ_MH522422.1
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NZ_MH143576.1
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NZ_MH061196.1
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NZ_MH938808.1
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NZ_MG825367.1
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NZ_MF774184.1
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NZ_MF774188.1
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NZ_MF136779.1
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NZ_MH522417.1
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NZ_MF175184.1
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NZ_KY770024.1
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NZ_MF175191.1
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NZ_MF175190.1
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NZ_KY463451.1
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NZ_MG210937.1
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NZ_KY770023.1
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NZ_MF774182.1
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NZ_MF978387.1
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NZ_MH043624.1
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NZ_KY565556.1
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NZ_MG747473.1
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NZ_MG257881.1
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NZ_MF449287.1
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NZ_KX772777.1
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NZ_KY463454.1
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NZ_MF175186.1
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NZ_MF175185.1
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NZ_KY075660.1
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NZ_KY964067.1
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NZ_KY075655.1
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NZ_KY689634.1
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NZ_KY012276.1
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NZ_KX711706.1
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NZ_KX570748.1
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NZ_KX447768.1
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NZ_KX254343.1
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NZ_KX129783.1
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NZ_KX084392.1
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NZ_KY075652.1
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NZ_KX894453.1
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NZ_KX236309.1
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NZ_CP021419.1
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NZ_KY120364.1
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NZ_KY075653.1
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NZ_CP053735.1
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NZ_KU743383.1
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NZ_KX032520.1
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NZ_CP033357.1
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NZ_CP045460.1
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NZ_CP046719.1
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NZ_CP047664.1
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NZ_CP069716.1
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NZ_MW010025.1
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NZ_MW010027.1
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NZ_MW010026.1
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NZ_CP063489.1
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NZ_MW390532.1
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NZ_MT499886.1
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NZ_CP048826.1
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NZ_MT929277.1
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NZ_MT929276.1
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NZ_MT929280.1
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NZ_MT929281.1
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NZ_MT929275.1
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NZ_MH715959.1
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NZ_MT929282.1
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NZ_MT929279.1
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NZ_MT929278.1
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NZ_MK574665.1
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NZ_MK940857.1
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NZ_CP061279.1
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NZ_CP060524.1
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NZ_MK836307.1
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NZ_MN200943.1
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NZ_MK940858.1
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NZ_MK875286.1
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NZ_MK875285.1
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NZ_MK875282.1
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NZ_MK875281.1
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NZ_MK875284.1
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NZ_OL504740.1
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NZ_CP117674.1
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NZ_LC341397.1
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NZ_LC511660.1
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NZ_LC511661.1
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NZ_CP090574.1
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NZ_OP428976.1
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NZ_OP428974.1
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NZ_OP428977.1
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NZ_OP428975.1
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NZ_OP428973.1
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NZ_OP428978.1
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NZ_CP091567.1
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NZ_CP101861.1
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NZ_CP101374.1
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NZ_CP101370.1
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NZ_CP060967.1
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NZ_MZ666125.1
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NZ_OK642378.1
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CP092291.1
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NZ_OK605084.1
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CP092324.1
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CP092320.1
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CP092330.1
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CP092316.1
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CP092312.1
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CP092328.1
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CP092309.1
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CP092305.1
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CP092300.1
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CP092296.1
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NZ_KU761327.1
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NZ_MW836072.1
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NZ_OK642377.1
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NZ_OK642379.1
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NZ_MW557326.1
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NZ_CP089138.1
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NZ_CP077663.1
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CP077665.1
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NZ_MW264509.1
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NZ_MW264507.1
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NZ_MW264508.1
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NZ_CP080094.1
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NZ_CP042970.1
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NZ_MT316509.1
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NZ_CP032076.1
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NZ_MW999352.1
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NZ_MW999354.1
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NZ_MW999356.1
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NZ_MW999353.1
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NZ_MW999355.1
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NZ_CP069661.1
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NZ_CP053212.1
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NZ_CP072316.1
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NZ_CP069695.1
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NZ_CP069650.1
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NZ_CP069680.1
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NZ_CP069669.1
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NZ_CP069685.1
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NZ_CP019908.1
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NZ_CP038181.1
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NZ_CP033349.2
See Comparison
NZ_CP037906.1
See Comparison
NZ_CP028174.1
See Comparison
NZ_CP034833.1
See Comparison
NZ_CP030795.1
See Comparison
NZ_LT838201.1
See Comparison
NZ_CP028167.1
See Comparison
NZ_CP024132.1
See Comparison
NZ_CP024149.1
See Comparison
NZ_CP136002.1
See Comparison
NZ_OR753270.1
See Comparison
AP027894.1
See Comparison
AP027810.1
See Comparison
NZ_CP135249.1
See Comparison
NZ_CP135280.1
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NZ_OM735817.1
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NZ_CP133915.1
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NZ_OM735815.1
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NZ_OM735814.1
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NZ_OM735813.1
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NZ_OM735816.1
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NZ_OM735812.1
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NZ_CP065064.1
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NZ_AP027975.1
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NZ_AP027962.1
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NZ_AP027955.1
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NZ_AP027959.1
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NZ_AP027982.1
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NZ_OQ557085.1
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NZ_CP110172.1
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NZ_CP064013.1
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NZ_CP104609.1
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NZ_CP125358.1
See Comparison
NZ_CP124870.1
See Comparison
NZ_CP134089.1
See Comparison
OZ026883.1
See Comparison
OZ026882.1
See Comparison
OZ026879.1
See Comparison
OZ026878.1
See Comparison
OZ026875.1
See Comparison
OZ026874.1
See Comparison
OZ026873.1
See Comparison
NZ_AP027777.1
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NZ_OR753269.1
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NZ_OR724980.1
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NZ_OR724988.1
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NZ_OR724972.1
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NZ_OR724981.1
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NZ_OR724982.1
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NZ_OR724983.1
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NZ_AP027817.1
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NZ_AP027858.1
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NZ_AP018411.1
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NZ_CP139890.1
See Comparison
NZ_CP139894.1
See Comparison
NZ_OR828567.1
See Comparison
NZ_CP059291.1
See Comparison
NZ_LC479086.1
See Comparison
NZ_LC477138.1
See Comparison
NZ_LC479085.1
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NZ_LC477294.1
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NZ_LC227558.1
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NZ_MH143576.1
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NZ_MK477615.1
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NZ_MK477610.1
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NZ_MK477604.1
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NZ_MH938808.1
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NZ_MH061196.1
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NZ_MF774184.1
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NZ_MH522417.1
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NZ_MF774188.1
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NZ_MH522422.1
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NZ_MF978387.1
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NZ_MG825367.1
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NZ_MH043624.1
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NZ_MF136779.1
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NZ_MF175191.1
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NZ_MG747473.1
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NZ_MF175190.1
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NZ_MG210937.1
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NZ_MF774182.1
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NZ_MF175186.1
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NZ_MG257881.1
See Comparison
NZ_MF449287.1
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NZ_MF175185.1
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NZ_MF175184.1
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NZ_KY964067.1
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NZ_KY689634.1
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NZ_KY770023.1
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NZ_KY770024.1
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NZ_KY565556.1
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NZ_KY463454.1
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NZ_KY463451.1
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NZ_KX711706.1
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NZ_KY075660.1
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NZ_KY075655.1
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NZ_KY012276.1
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NZ_KX447768.1
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NZ_KX254343.1
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NZ_KX570748.1
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NZ_KX894453.1
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NZ_KX129783.1
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NZ_KX772777.1
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NZ_KX084392.1
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NZ_KX236309.1
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NZ_KY075652.1
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NZ_KY120364.1
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NZ_KY075653.1
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NZ_CP021419.1
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NZ_KU743383.1
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NZ_KX032520.1
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NZ_CP053735.1
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NZ_MW390532.1
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NZ_CP045460.1
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NZ_CP046719.1
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NZ_CP047664.1
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NZ_CP033357.1
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NZ_MW010025.1
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NZ_MW010027.1
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NZ_MW010026.1
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NZ_CP063489.1
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NZ_MT929282.1
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NZ_CP069716.1
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NZ_CP048826.1
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NZ_MH715959.1
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NZ_MT929276.1
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NZ_MT929280.1
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NZ_MT929281.1
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NZ_MT929275.1
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NZ_MT929279.1
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NZ_MT929278.1
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NZ_MT929277.1
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NZ_MK836307.1
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NZ_MT499886.1
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NZ_MK940857.1
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NZ_CP061279.1
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NZ_CP060524.1
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NZ_MN200943.1
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NZ_MK875284.1
See Comparison
NZ_MK940858.1
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NZ_MK875286.1
See Comparison
NZ_MK875282.1
See Comparison
NZ_MK574665.1
See Comparison
NZ_MK875285.1
See Comparison
NZ_MK875281.1
See Comparison
NZ_LC341397.1
See Comparison
NZ_LC511660.1
See Comparison
NZ_LC511661.1
See Comparison
NZ_CP090574.1
See Comparison
NZ_CP117674.1
See Comparison
NZ_MZ666125.1
See Comparison
NZ_CP101374.1
See Comparison
NZ_CP101370.1
See Comparison
NZ_CP091567.1
See Comparison
NZ_CP060967.1
See Comparison
NZ_OK605084.1
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NZ_KU761327.1
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NZ_OK642378.1
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NZ_OK642377.1
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NZ_OK642379.1
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NZ_CP077663.1
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NZ_OP428976.1
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NZ_OP428974.1
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NZ_OP428977.1
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NZ_OP428975.1
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NZ_OP428973.1
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NZ_OP428978.1
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NZ_OL504740.1
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NZ_CP101861.1
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CP092324.1
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CP092320.1
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CP092330.1
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CP092316.1
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CP092312.1
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CP092328.1
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CP092309.1
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CP092305.1
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CP092300.1
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CP092296.1
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CP092291.1
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NZ_MW836072.1
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NZ_CP089138.1
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NZ_MW557326.1
See Comparison
NZ_MW264509.1
See Comparison
NZ_MW264507.1
See Comparison
NZ_MW264508.1
See Comparison
NZ_CP042970.1
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NZ_CP080094.1
See Comparison
NZ_MW999352.1
See Comparison
NZ_MW999354.1
See Comparison
NZ_MW999356.1
See Comparison
NZ_MW999353.1
See Comparison
NZ_MW999355.1
See Comparison
NZ_CP032076.1
See Comparison
NZ_MT316509.1
See Comparison
NZ_CP053212.1
See Comparison
NZ_CP072316.1
See Comparison
NZ_CP069661.1
See Comparison
NZ_CP069695.1
See Comparison
NZ_CP069650.1
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NZ_CP069680.1
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NZ_CP069669.1
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NZ_CP069685.1
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NZ_CP019908.1
See Comparison
NZ_CP135249.1
See Comparison
NZ_CP038181.1
See Comparison
NZ_CP034833.1
See Comparison
NZ_OR753269.1
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NZ_OR724980.1
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NZ_OR724988.1
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NZ_OR724972.1
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NZ_OR724981.1
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NZ_OR724982.1
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NZ_OR724983.1
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NZ_OR753270.1
See Comparison
AP027894.1
See Comparison
AP027810.1
See Comparison
NZ_CP136002.1
See Comparison
NZ_OM735814.1
See Comparison
NZ_OM735813.1
See Comparison
NZ_OM735816.1
See Comparison
NZ_OM735812.1
See Comparison
CP077665.1
See Comparison
NZ_CP033349.2
See Comparison
NZ_CP037906.1
See Comparison
NZ_CP030795.1
See Comparison
NZ_LT838201.1
See Comparison
NZ_CP028174.1
See Comparison
NZ_CP028167.1
See Comparison
NZ_CP024132.1
See Comparison
NZ_CP024149.1
See Comparison
NZ_CP135280.1
See Comparison
NZ_CP133915.1
See Comparison
NZ_OM735817.1
See Comparison
NZ_OM735815.1
See Comparison
NZ_CP065064.1
See Comparison
NZ_AP027959.1
See Comparison
NZ_CP104609.1
See Comparison
NZ_AP027975.1
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NZ_AP027982.1
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NZ_AP027962.1
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NZ_AP027955.1
See Comparison
NZ_OQ557085.1
See Comparison
NZ_CP125358.1
See Comparison
NZ_CP110172.1
See Comparison
NZ_CP064013.1
See Comparison
NZ_CP134089.1
See Comparison
NZ_CP124870.1
See Comparison
NZ_AP018411.1
See Comparison
OZ026883.1
See Comparison
OZ026882.1
See Comparison
OZ026879.1
See Comparison
OZ026878.1
See Comparison
OZ026875.1
See Comparison
OZ026874.1
See Comparison
OZ026873.1
See Comparison
NZ_OR828567.1
See Comparison
NZ_AP027777.1
See Comparison
NZ_AP027817.1
See Comparison
NZ_AP027858.1
See Comparison
NZ_CP139890.1
See Comparison
NZ_CP139894.1
See Comparison
NZ_CP059291.1
See Comparison
NZ_LC479086.1
See Comparison
NZ_LC477138.1
See Comparison
NZ_LC479085.1
See Comparison
NZ_LC477294.1
See Comparison
NZ_LC227558.1
See Comparison
NZ_MH143576.1
See Comparison
NZ_MK477615.1
See Comparison
NZ_MK477610.1
See Comparison
NZ_MK477604.1
See Comparison
NZ_MH938808.1
See Comparison
NZ_MG825367.1
See Comparison
NZ_MF136779.1
See Comparison
NZ_MH061196.1
See Comparison
NZ_MF774184.1
See Comparison
NZ_MH522417.1
See Comparison
NZ_MH522422.1
See Comparison
NZ_MF175191.1
See Comparison
NZ_MF175190.1
See Comparison
NZ_MG210937.1
See Comparison
NZ_MF774182.1
See Comparison
NZ_MF774188.1
See Comparison
NZ_MG257881.1
See Comparison
NZ_MF978387.1
See Comparison
NZ_MH043624.1
See Comparison
NZ_MF449287.1
See Comparison
NZ_MF175184.1
See Comparison
NZ_KY770023.1
See Comparison
NZ_KX711706.1
See Comparison
NZ_KY565556.1
See Comparison
NZ_KY463454.1
See Comparison
NZ_KY075660.1
See Comparison
NZ_MG747473.1
See Comparison
NZ_MF175186.1
See Comparison
NZ_MF175185.1
See Comparison
NZ_KY964067.1
See Comparison
NZ_KX447768.1
See Comparison
NZ_KY689634.1
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NZ_KY770024.1
See Comparison
NZ_KY075655.1
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NZ_KY012276.1
See Comparison
NZ_KX254343.1
See Comparison
NZ_KY463451.1
See Comparison
NZ_KX129783.1
See Comparison
NZ_KX084392.1
See Comparison
NZ_KX236309.1
See Comparison
NZ_KX570748.1
See Comparison
NZ_KY120364.1
See Comparison
NZ_KX894453.1
See Comparison
NZ_KX772777.1
See Comparison
NZ_KY075653.1
See Comparison
NZ_KU743383.1
See Comparison
NZ_KY075652.1
See Comparison
NZ_KX032520.1
See Comparison
NZ_CP045460.1
See Comparison
NZ_CP053735.1
See Comparison
NZ_CP021419.1
See Comparison
NZ_CP046719.1
See Comparison
NZ_CP033357.1
See Comparison
NZ_CP047664.1
See Comparison
NZ_CP069716.1
See Comparison
NZ_MW010025.1
See Comparison
NZ_MW010027.1
See Comparison
NZ_MW010026.1
See Comparison
NZ_CP063489.1
See Comparison
NZ_MW390532.1
See Comparison
NZ_MT929282.1
See Comparison
NZ_CP048826.1
See Comparison
NZ_MH715959.1
See Comparison
NZ_MT929276.1
See Comparison
NZ_MT929280.1
See Comparison
NZ_MT929281.1
See Comparison
NZ_MT929279.1
See Comparison
NZ_MT929278.1
See Comparison
NZ_MT929277.1
See Comparison
NZ_MT929275.1
See Comparison
NZ_MT499886.1
See Comparison
NZ_MK940857.1
See Comparison
NZ_CP061279.1
See Comparison
NZ_CP060524.1
See Comparison
NZ_MK940858.1
See Comparison
NZ_MK836307.1
See Comparison
NZ_MN200943.1
See Comparison
NZ_MK875284.1
See Comparison
NZ_MK574665.1
See Comparison
NZ_MK875285.1
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NZ_MK875281.1
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NZ_MK875286.1
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NZ_MK875282.1
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NZ_CP117674.1
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NZ_LC341397.1
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NZ_LC511660.1
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NZ_LC511661.1
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NZ_CP090574.1
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NZ_OP428976.1
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NZ_OP428974.1
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NZ_OP428977.1
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NZ_OP428975.1
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NZ_OP428973.1
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NZ_OP428978.1
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NZ_CP101861.1
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NZ_OL504740.1
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NZ_MW999352.1
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NZ_CP101374.1
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NZ_CP101370.1
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NZ_CP091567.1
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NZ_CP060967.1
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NZ_KU761327.1
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NZ_OK642378.1
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NZ_OK642377.1
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NZ_OK642379.1
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NZ_CP077663.1
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CP077665.1
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NZ_CP042970.1
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NZ_CP080094.1
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NZ_MZ666125.1
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CP092324.1
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CP092320.1
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CP092330.1
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CP092316.1
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CP092312.1
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CP092328.1
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CP092309.1
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CP092305.1
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CP092300.1
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CP092296.1
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CP092291.1
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NZ_OK605084.1
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NZ_MW836072.1
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NZ_CP089138.1
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NZ_MW557326.1
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NZ_MW264509.1
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NZ_MW264507.1
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NZ_MW264508.1
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NZ_MW999354.1
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NZ_MW999356.1
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NZ_MW999353.1
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NZ_MW999355.1
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NZ_CP053212.1
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NZ_CP032076.1
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NZ_MT316509.1
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NZ_CP072316.1
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NZ_CP069661.1
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NZ_CP069695.1
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NZ_CP069650.1
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NZ_CP069680.1
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NZ_CP069669.1
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NZ_CP069685.1
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NZ_CP019908.1
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NZ_CP038181.1
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NZ_CP033349.2
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NZ_CP037906.1
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NZ_CP030795.1
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NZ_CP034833.1
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NZ_LT838201.1
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NZ_CP028174.1
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NZ_CP028167.1
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NZ_CP024132.1
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NZ_OR753269.1
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NZ_OR724980.1
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NZ_OR724988.1
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NZ_OR724972.1
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NZ_OR724981.1
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NZ_OR724982.1
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NZ_OR724983.1
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NZ_OR753270.1
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AP027894.1
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AP027810.1
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NZ_CP136002.1
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NZ_CP135249.1
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NZ_CP135280.1
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NZ_CP133915.1
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NZ_OM735817.1
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NZ_OM735815.1
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NZ_OM735814.1
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NZ_CP065064.1
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NZ_OQ557085.1
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NZ_CP104609.1
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NZ_CP124870.1
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OZ026883.1
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OZ026882.1
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NZ_AP027777.1
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NZ_AP027817.1
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NZ_AP027858.1
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NZ_OM735813.1
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NZ_OM735816.1
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NZ_OM735812.1
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NZ_AP027982.1
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NZ_AP027962.1
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NZ_AP027955.1
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NZ_AP027959.1
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NZ_CP110172.1
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NZ_CP064013.1
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NZ_CP125358.1
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NZ_CP134089.1
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OZ026879.1
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OZ026878.1
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OZ026875.1
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OZ026874.1
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OZ026873.1
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NZ_CP024149.1
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NZ_OR828567.1
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NZ_CP139890.1
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NZ_CP139894.1
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NZ_CP059291.1
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NZ_LC479086.1
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NZ_LC477138.1
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NZ_AP018411.1
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NZ_LC479085.1
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NZ_LC477294.1
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NZ_LC227558.1
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NZ_MK477610.1
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NZ_MK477615.1
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NZ_MH143576.1
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NZ_MK477604.1
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NZ_MH938808.1
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Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore