Plasmid NZ_CP148819.1

Sequence

Nucleotide Information

Accession NZ_CP148819.1
Description Salmonella enterica subsp. enterica serovar Infantis strain Z1323CSL0017 plasmid pZ1323CSL0017-2, complete sequence
Source refseq
Topology circular
Length 290815 bp
GC Content 0.50 %
Created at NCBI April 5, 2024





Similar Plasmids

based on Mash distance

NZ_CP148819.1 See Comparison
NZ_CP148823.1 See Comparison
CP052834.1 See Comparison
CP052830.1 See Comparison
CP052822.1 See Comparison
CP052814.1 See Comparison
CP052804.1 See Comparison
CP052793.1 See Comparison
CP052791.1 See Comparison
NZ_CP148823.1 See Comparison
NZ_CP119981.1 See Comparison
CP082618.1 See Comparison
NZ_CP148823.1 See Comparison
CP052834.1 See Comparison
CP052830.1 See Comparison
CP052822.1 See Comparison
CP052814.1 See Comparison
CP052804.1 See Comparison
CP052793.1 See Comparison
CP052791.1 See Comparison
CP082618.1 See Comparison
NZ_CP119981.1 See Comparison
CP052834.1 See Comparison
CP052830.1 See Comparison
CP052822.1 See Comparison
CP052814.1 See Comparison
CP052804.1 See Comparison
CP052793.1 See Comparison
CP052791.1 See Comparison
CP052834.1 See Comparison
NZ_CP119981.1 See Comparison
CP082618.1 See Comparison
NZ_CP148823.1 See Comparison
CP052830.1 See Comparison
CP052822.1 See Comparison
CP052814.1 See Comparison
CP052804.1 See Comparison
CP052793.1 See Comparison
CP052791.1 See Comparison
NZ_CP119981.1 See Comparison
CP082618.1 See Comparison
CP052834.1 See Comparison
NZ_CP148823.1 See Comparison
CP052822.1 See Comparison
CP052814.1 See Comparison
CP052804.1 See Comparison
CP052793.1 See Comparison
CP052791.1 See Comparison
CP052830.1 See Comparison
CP082618.1 See Comparison
NZ_CP119981.1 See Comparison
CP052793.1 See Comparison
NZ_CP148823.1 See Comparison
CP052791.1 See Comparison
CP052834.1 See Comparison
CP052830.1 See Comparison
CP052822.1 See Comparison
CP052814.1 See Comparison
CP052804.1 See Comparison
NZ_CP119981.1 See Comparison
CP082618.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore