Plasmid NZ_CP130661.1

Sequence

Nucleotide Information

Accession NZ_CP130661.1
Description Klebsiella pneumoniae subsp. pneumoniae strain SM117 plasmid pSM117_2, complete sequence
Source refseq
Topology circular
Length 19458 bp
GC Content 0.53 %
Created at NCBI Aug. 1, 2023



Assembly

Genome Data Information

Accession GCF_030552935.1
Assembly Coverage 100


Biosample

Curated Collection Information
Accession 36664845

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,Sanmen
Original Query Type name
Coordinates (Lat/Lon) 29.11/121.39
Address China,Sanmen

ECOSYSTEM
Original Query Homo sapiens,sputum
Classification host_associated,respiratory_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query Infection
DOID/SYMP
  • Disease infectious agent (DOID:0050117 )
    • A disease that is the consequence of the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

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NZ_CP079677.1 See Comparison
NZ_CP092651.1 See Comparison
NZ_CP083058.1 See Comparison
NZ_CP097390.1 See Comparison
NZ_CP079167.1 See Comparison
NZ_CP079729.1 See Comparison
NZ_CP079602.1 See Comparison
CP128694.1 See Comparison
NZ_CP071088.1 See Comparison
NZ_CP040596.1 See Comparison
NZ_CP132718.1 See Comparison
NZ_CP132708.1 See Comparison
NZ_CP132701.1 See Comparison
NZ_CP132627.1 See Comparison
NZ_CP132633.1 See Comparison
NZ_CP036196.1 See Comparison
CP035911.1 See Comparison
CP139235.1 See Comparison
CP139229.1 See Comparison
NZ_CP045679.1 See Comparison
CP058802.1 See Comparison
NZ_CP053775.1 See Comparison
NZ_CP053769.1 See Comparison
NZ_CP141572.1 See Comparison
NZ_CP103506.1 See Comparison
NZ_CP047705.1 See Comparison
NZ_CP115152.1 See Comparison
NZ_CP119124.1 See Comparison
NZ_CP083934.1 See Comparison
NZ_CP100080.1 See Comparison
NZ_CP097390.1 See Comparison
NZ_CP040596.1 See Comparison
NZ_CP079729.1 See Comparison
NZ_CP079602.1 See Comparison
NZ_CP079677.1 See Comparison
NZ_CP092651.1 See Comparison
NZ_CP083058.1 See Comparison
NZ_CP079167.1 See Comparison
NZ_CP071088.1 See Comparison
NZ_CP092651.1 See Comparison
NZ_CP036196.1 See Comparison
CP035911.1 See Comparison
NZ_CP132718.1 See Comparison
NZ_CP132708.1 See Comparison
NZ_CP132701.1 See Comparison
NZ_CP132627.1 See Comparison
NZ_CP132633.1 See Comparison
CP128694.1 See Comparison
NZ_CP141572.1 See Comparison
NZ_CP047705.1 See Comparison
NZ_CP119124.1 See Comparison
NZ_CP083934.1 See Comparison
NZ_CP097390.1 See Comparison
CP139235.1 See Comparison
CP139229.1 See Comparison
CP058802.1 See Comparison
NZ_CP053775.1 See Comparison
NZ_CP053769.1 See Comparison
NZ_CP045679.1 See Comparison
NZ_CP115152.1 See Comparison
NZ_CP100080.1 See Comparison
NZ_CP103506.1 See Comparison
NZ_CP083058.1 See Comparison
NZ_CP071088.1 See Comparison
NZ_CP079729.1 See Comparison
NZ_CP079602.1 See Comparison
NZ_CP079677.1 See Comparison
NZ_CP079167.1 See Comparison
NZ_CP040596.1 See Comparison
NZ_CP045679.1 See Comparison
CP139235.1 See Comparison
CP139229.1 See Comparison
CP058802.1 See Comparison
NZ_CP053775.1 See Comparison
NZ_CP053769.1 See Comparison
NZ_CP036196.1 See Comparison
CP035911.1 See Comparison
NZ_CP132718.1 See Comparison
NZ_CP132708.1 See Comparison
NZ_CP132701.1 See Comparison
NZ_CP132627.1 See Comparison
NZ_CP132633.1 See Comparison
CP128694.1 See Comparison
NZ_CP141572.1 See Comparison
NZ_CP119124.1 See Comparison
NZ_CP047705.1 See Comparison
NZ_CP115152.1 See Comparison
NZ_CP083934.1 See Comparison
NZ_CP100080.1 See Comparison
NZ_CP092651.1 See Comparison
NZ_CP097390.1 See Comparison
NZ_CP103506.1 See Comparison
NZ_CP083058.1 See Comparison
NZ_CP079602.1 See Comparison
NZ_CP079677.1 See Comparison
NZ_CP079729.1 See Comparison
NZ_CP079167.1 See Comparison
CP139235.1 See Comparison
NZ_CP036196.1 See Comparison
CP035911.1 See Comparison
NZ_CP071088.1 See Comparison
NZ_CP040596.1 See Comparison
CP139229.1 See Comparison
CP128694.1 See Comparison
NZ_CP132718.1 See Comparison
NZ_CP132708.1 See Comparison
NZ_CP132701.1 See Comparison
NZ_CP132627.1 See Comparison
NZ_CP132633.1 See Comparison
CP058802.1 See Comparison
NZ_CP141572.1 See Comparison
NZ_CP053775.1 See Comparison
NZ_CP053769.1 See Comparison
NZ_CP119124.1 See Comparison
NZ_CP047705.1 See Comparison
NZ_CP045679.1 See Comparison
NZ_CP115152.1 See Comparison
NZ_CP083934.1 See Comparison
NZ_CP100080.1 See Comparison
NZ_CP092651.1 See Comparison
NZ_CP097390.1 See Comparison
NZ_CP103506.1 See Comparison
NZ_CP079602.1 See Comparison
NZ_CP083058.1 See Comparison
NZ_CP079677.1 See Comparison
NZ_CP079167.1 See Comparison
NZ_CP079729.1 See Comparison
CP139235.1 See Comparison
NZ_CP040596.1 See Comparison
NZ_CP071088.1 See Comparison
NZ_CP036196.1 See Comparison
CP035911.1 See Comparison
CP139229.1 See Comparison
CP128694.1 See Comparison
NZ_CP132718.1 See Comparison
NZ_CP132708.1 See Comparison
NZ_CP132701.1 See Comparison
NZ_CP132627.1 See Comparison
NZ_CP132633.1 See Comparison
NZ_CP053775.1 See Comparison
NZ_CP141572.1 See Comparison
NZ_CP053769.1 See Comparison
NZ_CP045679.1 See Comparison
CP058802.1 See Comparison
NZ_CP115152.1 See Comparison
NZ_CP047705.1 See Comparison
NZ_CP119124.1 See Comparison
NZ_CP083934.1 See Comparison
NZ_CP097390.1 See Comparison
NZ_CP100080.1 See Comparison
NZ_CP103506.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore