Plasmid NZ_CP083058.1

Sequence

Nucleotide Information

Accession	NZ_CP083058.1
Description	Klebsiella pneumoniae strain 1613258639 plasmid p3-1613258639, complete sequence
Source	refseq
Topology	circular
Length	9730 bp
GC Content	0.53 %
Created at NCBI	Dec. 11, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (573)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_021137935.1
Assembly Coverage	266.869

Biosample

Curated Collection Information

Accession	21016543

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	46.188053N;6.143417E
Original Query Type	coordinates
Coordinates (Lat/Lon)	46.19/6.14
Address	6, Rue de la Colline, Plainpalais, Geneva, 1227, Switzerland

ECOSYSTEM

Original Query	Homo sapiens,rectal swab
Classification	gastrointestinal_system,host_associated,rectal
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP045679.1	See Comparison
NZ_CP047705.1	See Comparison
NZ_CP119124.1	See Comparison
NZ_CP115152.1	See Comparison
NZ_CP083934.1	See Comparison
NZ_CP100080.1	See Comparison
NZ_CP103506.1	See Comparison
NZ_CP097390.1	See Comparison
NZ_CP092651.1	See Comparison
NZ_CP079729.1	See Comparison
NZ_CP079602.1	See Comparison
NZ_CP079677.1	See Comparison
NZ_CP040596.1	See Comparison
NZ_CP079167.1	See Comparison
NZ_CP071088.1	See Comparison
NZ_CP132718.1	See Comparison
CP139235.1	See Comparison
CP139229.1	See Comparison
NZ_CP036196.1	See Comparison
CP035911.1	See Comparison
NZ_CP132708.1	See Comparison
NZ_CP132701.1	See Comparison
NZ_CP132627.1	See Comparison
NZ_CP132633.1	See Comparison
CP058802.1	See Comparison
NZ_CP130661.1	See Comparison
CP128694.1	See Comparison
NZ_CP141572.1	See Comparison
NZ_CP053775.1	See Comparison
NZ_CP053769.1	See Comparison
NZ_CP097390.1	See Comparison
NZ_CP045679.1	See Comparison
NZ_CP083934.1	See Comparison
NZ_CP100080.1	See Comparison
NZ_CP047705.1	See Comparison
NZ_CP119124.1	See Comparison
NZ_CP115152.1	See Comparison
NZ_CP103506.1	See Comparison
NZ_CP092651.1	See Comparison
NZ_CP079677.1	See Comparison
NZ_CP079167.1	See Comparison
NZ_CP079729.1	See Comparison
NZ_CP079602.1	See Comparison
NZ_CP097390.1	See Comparison
NZ_CP040596.1	See Comparison
CP139235.1	See Comparison
CP139229.1	See Comparison
NZ_CP132718.1	See Comparison
NZ_CP132708.1	See Comparison
NZ_CP132701.1	See Comparison
NZ_CP132627.1	See Comparison
NZ_CP132633.1	See Comparison
NZ_CP141572.1	See Comparison
CP058802.1	See Comparison
NZ_CP119124.1	See Comparison
NZ_CP115152.1	See Comparison
NZ_CP083934.1	See Comparison
NZ_CP100080.1	See Comparison
NZ_CP071088.1	See Comparison
NZ_CP036196.1	See Comparison
CP035911.1	See Comparison
NZ_CP130661.1	See Comparison
CP128694.1	See Comparison
NZ_CP053775.1	See Comparison
NZ_CP053769.1	See Comparison
NZ_CP045679.1	See Comparison
NZ_CP047705.1	See Comparison
NZ_CP103506.1	See Comparison
NZ_CP071088.1	See Comparison
NZ_CP079729.1	See Comparison
NZ_CP079602.1	See Comparison
NZ_CP092651.1	See Comparison
NZ_CP079677.1	See Comparison
NZ_CP079167.1	See Comparison
NZ_CP040596.1	See Comparison
NZ_CP132718.1	See Comparison
NZ_CP036196.1	See Comparison
CP035911.1	See Comparison
CP139235.1	See Comparison
CP139229.1	See Comparison
NZ_CP132708.1	See Comparison
NZ_CP132701.1	See Comparison
NZ_CP132627.1	See Comparison
NZ_CP132633.1	See Comparison
NZ_CP130661.1	See Comparison
CP058802.1	See Comparison
CP128694.1	See Comparison
NZ_CP141572.1	See Comparison
NZ_CP053775.1	See Comparison
NZ_CP053769.1	See Comparison
NZ_CP083934.1	See Comparison
NZ_CP047705.1	See Comparison
NZ_CP119124.1	See Comparison
NZ_CP115152.1	See Comparison
NZ_CP045679.1	See Comparison
NZ_CP100080.1	See Comparison
NZ_CP092651.1	See Comparison
NZ_CP097390.1	See Comparison
NZ_CP103506.1	See Comparison
NZ_CP079729.1	See Comparison
NZ_CP079677.1	See Comparison
NZ_CP079602.1	See Comparison
NZ_CP036196.1	See Comparison
NZ_CP079167.1	See Comparison
NZ_CP071088.1	See Comparison
NZ_CP040596.1	See Comparison
CP035911.1	See Comparison
NZ_CP132718.1	See Comparison
CP139235.1	See Comparison
CP139229.1	See Comparison
NZ_CP132708.1	See Comparison
NZ_CP132701.1	See Comparison
NZ_CP132627.1	See Comparison
NZ_CP132633.1	See Comparison
NZ_CP141572.1	See Comparison
NZ_CP130661.1	See Comparison
CP128694.1	See Comparison
NZ_CP103506.1	See Comparison
CP058802.1	See Comparison
NZ_CP053775.1	See Comparison
NZ_CP053769.1	See Comparison
NZ_CP045679.1	See Comparison
NZ_CP047705.1	See Comparison
NZ_CP119124.1	See Comparison
NZ_CP115152.1	See Comparison
NZ_CP083934.1	See Comparison
NZ_CP100080.1	See Comparison
NZ_CP079729.1	See Comparison
NZ_CP092651.1	See Comparison
NZ_CP097390.1	See Comparison
NZ_CP079677.1	See Comparison
NZ_CP079602.1	See Comparison
NZ_CP040596.1	See Comparison
NZ_CP079167.1	See Comparison
NZ_CP071088.1	See Comparison
NZ_CP130661.1	See Comparison
NZ_CP036196.1	See Comparison
CP035911.1	See Comparison
NZ_CP132718.1	See Comparison
NZ_CP132708.1	See Comparison
NZ_CP132701.1	See Comparison
NZ_CP132627.1	See Comparison
CP139235.1	See Comparison
CP139229.1	See Comparison
NZ_CP132633.1	See Comparison
CP058802.1	See Comparison
CP128694.1	See Comparison
NZ_CP141572.1	See Comparison
NZ_CP053775.1	See Comparison
NZ_CP053769.1	See Comparison
NZ_CP045679.1	See Comparison
NZ_CP119124.1	See Comparison
NZ_CP047705.1	See Comparison
NZ_CP097390.1	See Comparison
NZ_CP115152.1	See Comparison
NZ_CP083934.1	See Comparison
NZ_CP100080.1	See Comparison
NZ_CP103506.1	See Comparison
NZ_CP083058.1	See Comparison
NZ_CP092651.1	See Comparison
NZ_CP079729.1	See Comparison
NZ_CP079677.1	See Comparison
NZ_CP079602.1	See Comparison
NZ_CP071088.1	See Comparison
NZ_CP079167.1	See Comparison
NZ_CP040596.1	See Comparison
NZ_CP132718.1	See Comparison
NZ_CP036196.1	See Comparison
CP035911.1	See Comparison
CP139235.1	See Comparison
CP139229.1	See Comparison
NZ_CP132708.1	See Comparison
NZ_CP132701.1	See Comparison
NZ_CP132627.1	See Comparison
NZ_CP132633.1	See Comparison
NZ_CP141572.1	See Comparison
CP128694.1	See Comparison
NZ_CP130661.1	See Comparison
CP058802.1	See Comparison
NZ_CP053775.1	See Comparison
NZ_CP053769.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore