Plasmid NZ_CP109952.1

Sequence

Nucleotide Information

Accession NZ_CP109952.1
Description Klebsiella pneumoniae strain KP1650 plasmid pKP1650-4, complete sequence
Source refseq
Topology circular
Length 23943 bp
GC Content 0.56 %
Created at NCBI Nov. 3, 2022



Assembly

Genome Data Information

Accession GCF_025946845.1
Assembly Coverage 30.65


Biosample

Curated Collection Information

Accession 31373057

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 22.28N;113.58E
Original Query Type coordinates
Coordinates (Lat/Lon) 22.28/113.58
Address Haiyu Road, Xiangwan Subdistrict, Xiangzhou District, Zhuhai, Guangdong Province, 519000, China

ECOSYSTEM
Original Query Homo sapiens,Bronchoalveolar lavage fluid
Classification bronchi,host_associated,respiratory_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query severe pulmonary infection
DOID/SYMP
  • Lung disease (DOID:850 )
  • A lower respiratory tract disease in which the function of the lungs is adversely affected by narrowing or blockage of the airways resulting in poor air flow, a loss of elasticity in the lungs that produces a decrease in the total volume of air that the lungs are able to hold, and clotting, scarring, or inflammation of the blood vessels that affect the ability of the lungs to take up oxygen and to release carbon dioxide.

Visualization


Plasmids from same Biosample



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NZ_CP119175.1 See Comparison
NZ_CP116907.1 See Comparison
NZ_CP107516.1 See Comparison
NZ_CP107332.1 See Comparison
NZ_CP107350.1 See Comparison
NZ_CP107325.1 See Comparison
NZ_CP107410.1 See Comparison
NZ_CP107388.1 See Comparison
NZ_CP107301.1 See Comparison
NZ_CP107295.1 See Comparison
NZ_CP107369.1 See Comparison
NZ_CP107318.1 See Comparison
NZ_CP107456.1 See Comparison
NZ_CP107466.1 See Comparison
NZ_CP109977.1 See Comparison
NZ_CP107339.1 See Comparison
NZ_CP103321.1 See Comparison
NZ_CP107018.1 See Comparison
NZ_CP102195.1 See Comparison
NZ_CP102840.1 See Comparison
NZ_CP102189.1 See Comparison
NZ_CP101781.1 See Comparison
NZ_CP101787.1 See Comparison
NZ_CP101768.1 See Comparison
NZ_CP101773.1 See Comparison
NZ_CP099417.1 See Comparison
NZ_CP066908.1 See Comparison
NZ_CP087667.1 See Comparison
NZ_CP087661.1 See Comparison
NZ_CP087655.1 See Comparison
NZ_CP095259.1 See Comparison
NZ_CP087150.1 See Comparison
NZ_OM001479.1 See Comparison
NZ_CP087155.1 See Comparison
NZ_OM001473.1 See Comparison
NZ_OM001477.1 See Comparison
NZ_CP092798.1 See Comparison
NZ_CP066155.1 See Comparison
NZ_CP089992.1 See Comparison
NZ_CP090466.1 See Comparison
NZ_CP090436.1 See Comparison
NZ_CP084709.1 See Comparison
NZ_CP085893.1 See Comparison
NZ_CP084496.1 See Comparison
NZ_CP082757.1 See Comparison
NZ_CP082028.1 See Comparison
NZ_CP082763.1 See Comparison
NZ_CP082769.1 See Comparison
NZ_MW598236.1 See Comparison
NZ_CP078127.1 See Comparison
NZ_CP080301.1 See Comparison
NZ_CP080314.1 See Comparison
NZ_MW598243.1 See Comparison
NZ_CP076551.1 See Comparison
NZ_MW598233.1 See Comparison
NZ_CP075320.1 See Comparison
NZ_CP055299.1 See Comparison
NZ_CP041377.1 See Comparison
NZ_CP072466.1 See Comparison
NZ_CP040537.1 See Comparison
NZ_CP033964.1 See Comparison
NZ_CP033958.1 See Comparison
NZ_CP040549.1 See Comparison
NZ_CP040543.1 See Comparison
NZ_CP029379.1 See Comparison
NZ_CP036308.1 See Comparison
CP038005.1 See Comparison
CP139241.1 See Comparison
CP023932.1 See Comparison
CP139223.1 See Comparison
NZ_CP137350.1 See Comparison
NZ_CP138519.1 See Comparison
NZ_CP136851.1 See Comparison
NZ_CP136272.1 See Comparison
NZ_CP092276.1 See Comparison
NZ_CP133405.1 See Comparison
NZ_CP134811.1 See Comparison
NZ_CP132052.1 See Comparison
NZ_CP132046.1 See Comparison
NZ_CP130268.1 See Comparison
NZ_CP130262.1 See Comparison
CP097475.1 See Comparison
NZ_CP130691.1 See Comparison
NZ_CP129818.1 See Comparison
NZ_CP129813.1 See Comparison
NZ_CP129745.1 See Comparison
NZ_CP129709.1 See Comparison
CP128784.1 See Comparison
NZ_CP127157.1 See Comparison
NZ_CP040715.1 See Comparison
NZ_CP142695.1 See Comparison
NZ_CP154392.1 See Comparison
NZ_CP154422.1 See Comparison
NZ_CP154302.1 See Comparison
NZ_CP154397.1 See Comparison
NZ_CP152448.1 See Comparison
NZ_CP146600.1 See Comparison
NZ_CP146195.1 See Comparison
NZ_CP125337.1 See Comparison
NZ_CP125340.1 See Comparison
NZ_CP154348.1 See Comparison
NZ_CP154427.1 See Comparison
NZ_CP147745.1 See Comparison
NZ_CP147835.1 See Comparison
NZ_CP147167.1 See Comparison
NZ_CP143303.1 See Comparison
NZ_CP144306.1 See Comparison
NZ_CP141803.1 See Comparison
NZ_CP141670.1 See Comparison
NZ_CP141604.1 See Comparison
CP071165.1 See Comparison
NZ_CP054760.1 See Comparison
NZ_CP054784.1 See Comparison
NZ_CP054724.1 See Comparison
NZ_CP054754.1 See Comparison
NZ_CP054736.1 See Comparison
NZ_CP054766.1 See Comparison
CP050284.1 See Comparison
NZ_CP054742.1 See Comparison
NZ_CP054730.1 See Comparison
NZ_CP054772.1 See Comparison
NZ_CP066532.1 See Comparison
NZ_CP039822.1 See Comparison
NZ_CP039812.1 See Comparison
NZ_CP069174.1 See Comparison
NZ_CP066521.1 See Comparison
NZ_CP063764.1 See Comparison
NZ_CP066258.1 See Comparison
NZ_CP064239.1 See Comparison
NZ_CP064245.1 See Comparison
NZ_CP064221.1 See Comparison
NZ_CP141785.1 See Comparison
NZ_CP064256.1 See Comparison
NZ_CP107410.1 See Comparison
NZ_CP107310.1 See Comparison
NZ_CP107516.1 See Comparison
NZ_CP063837.1 See Comparison
NZ_MT090962.1 See Comparison
NZ_CP119015.1 See Comparison
NZ_CP119175.1 See Comparison
NZ_CP116907.1 See Comparison
NZ_CP107332.1 See Comparison
NZ_CP107388.1 See Comparison
NZ_CP107325.1 See Comparison
NZ_CP107301.1 See Comparison
NZ_CP107350.1 See Comparison
NZ_CP109977.1 See Comparison
NZ_CP107369.1 See Comparison
NZ_CP107318.1 See Comparison
NZ_CP107466.1 See Comparison
NZ_CP107339.1 See Comparison
NZ_CP107295.1 See Comparison
NZ_CP107456.1 See Comparison
NZ_CP107018.1 See Comparison
NZ_CP103321.1 See Comparison
NZ_CP102189.1 See Comparison
NZ_CP101781.1 See Comparison
NZ_CP102840.1 See Comparison
NZ_CP101768.1 See Comparison
NZ_CP101787.1 See Comparison
NZ_CP102195.1 See Comparison
NZ_CP101773.1 See Comparison
NZ_CP087667.1 See Comparison
NZ_CP066908.1 See Comparison
NZ_CP099417.1 See Comparison
NZ_CP087661.1 See Comparison
NZ_CP087655.1 See Comparison
NZ_CP087150.1 See Comparison
NZ_CP095259.1 See Comparison
NZ_CP087155.1 See Comparison
NZ_CP066155.1 See Comparison
NZ_OM001473.1 See Comparison
NZ_OM001477.1 See Comparison
NZ_OM001479.1 See Comparison
NZ_CP092798.1 See Comparison
NZ_CP090466.1 See Comparison
NZ_CP090436.1 See Comparison
NZ_CP089992.1 See Comparison
NZ_CP085893.1 See Comparison
NZ_CP082769.1 See Comparison
NZ_CP084709.1 See Comparison
NZ_CP084496.1 See Comparison
NZ_CP082757.1 See Comparison
NZ_CP082763.1 See Comparison
NZ_CP080314.1 See Comparison
NZ_CP082028.1 See Comparison
NZ_CP078127.1 See Comparison
NZ_CP080301.1 See Comparison
NZ_MW598243.1 See Comparison
NZ_CP076551.1 See Comparison
NZ_MW598236.1 See Comparison
NZ_MW598233.1 See Comparison
NZ_CP075320.1 See Comparison
NZ_CP055299.1 See Comparison
NZ_CP072466.1 See Comparison


Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Biosynthetic Gene Clusters

based on ANTISMASH

Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore