PLSDB
v. 2024_05_31_v2
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Biosyntethic Gene Clusters
Typing
Plasmid NZ_CP109952.1
Sequence
Nucleotide Information
Accession
NZ_CP109952.1
Description
Klebsiella pneumoniae strain KP1650 plasmid pKP1650-4, complete sequence
Source
refseq
Topology
circular
Length
23943 bp
GC Content
0.56 %
Created at NCBI
Nov. 3, 2022
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Assembly
Genome Data Information
Accession
GCF_025946845.1
Assembly Coverage
30.65
Biosample
Curated Collection Information
Accession
31373057
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
22.28N;113.58E
Original Query Type
coordinates
Coordinates (Lat/Lon)
22.28/113.58
Address
Haiyu Road, Xiangwan Subdistrict, Xiangzhou District, Zhuhai, Guangdong Province, 519000, China
ECOSYSTEM
Original Query
Homo sapiens,Bronchoalveolar lavage fluid
Classification
bronchi,host_associated,respiratory_system
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
severe pulmonary infection
DOID/SYMP
Lung disease
(
DOID:850
)
A lower respiratory tract disease in which the function of the lungs is adversely affected by narrowing or blockage of the airways resulting in poor air flow, a loss of elasticity in the lungs that produces a decrease in the total volume of air that the lungs are able to hold, and clotting, scarring, or inflammation of the blood vessels that affect the ability of the lungs to take up oxygen and to release carbon dioxide.
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_CP109951.1
NZ_CP109950.1
NZ_CP109949.1
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based on Mash distance
NZ_CP041377.1
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NZ_CP129709.1
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CP128784.1
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NZ_CP127157.1
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NZ_CP125337.1
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NZ_CP125340.1
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NZ_CP154348.1
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NZ_CP154427.1
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NZ_CP154392.1
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NZ_CP154422.1
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NZ_CP154302.1
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NZ_CP154397.1
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NZ_CP152448.1
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NZ_CP147745.1
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NZ_CP147835.1
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NZ_CP147167.1
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NZ_CP146600.1
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NZ_CP146195.1
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NZ_CP142695.1
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NZ_CP144306.1
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NZ_CP143303.1
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NZ_CP141785.1
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NZ_CP141803.1
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NZ_CP141670.1
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NZ_CP141604.1
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CP071165.1
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NZ_CP054784.1
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NZ_CP054754.1
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NZ_CP054766.1
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NZ_CP054742.1
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NZ_CP054730.1
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NZ_CP054772.1
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NZ_CP054760.1
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NZ_CP054724.1
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NZ_CP054736.1
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CP050284.1
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NZ_CP039822.1
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NZ_CP039812.1
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NZ_CP069174.1
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NZ_CP066521.1
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NZ_CP064256.1
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NZ_CP066532.1
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NZ_CP066258.1
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NZ_CP064239.1
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NZ_CP063837.1
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NZ_CP064245.1
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NZ_CP064221.1
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NZ_CP063764.1
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NZ_MT090962.1
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NZ_CP119175.1
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NZ_CP107310.1
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NZ_CP107410.1
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NZ_CP107388.1
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NZ_CP107301.1
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NZ_CP107466.1
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NZ_CP119015.1
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NZ_CP116907.1
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NZ_CP107516.1
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NZ_CP107332.1
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NZ_CP107325.1
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NZ_CP107318.1
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NZ_CP107018.1
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NZ_CP102840.1
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NZ_CP102195.1
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NZ_CP102189.1
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NZ_CP101773.1
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NZ_CP101768.1
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NZ_CP066908.1
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NZ_CP089992.1
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NZ_CP099417.1
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NZ_CP087655.1
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NZ_CP095259.1
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NZ_OM001473.1
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NZ_OM001477.1
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NZ_CP092798.1
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NZ_CP090466.1
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NZ_CP090436.1
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NZ_CP085893.1
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NZ_CP087661.1
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NZ_CP075320.1
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NZ_CP033964.1
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NZ_CP033958.1
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NZ_CP040549.1
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NZ_CP040543.1
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CP038005.1
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NZ_CP036308.1
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NZ_CP029379.1
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CP023932.1
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CP139241.1
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CP139223.1
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NZ_CP137350.1
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NZ_CP138519.1
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NZ_CP136851.1
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NZ_CP136272.1
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NZ_CP134811.1
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NZ_CP132052.1
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NZ_CP132046.1
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CP097475.1
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NZ_CP092276.1
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NZ_CP130268.1
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NZ_CP130262.1
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NZ_CP066258.1
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NZ_CP064256.1
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NZ_CP064239.1
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NZ_CP064245.1
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NZ_CP064221.1
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NZ_CP063837.1
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NZ_CP063764.1
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NZ_CP119015.1
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NZ_CP119175.1
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NZ_CP116907.1
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NZ_CP107350.1
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NZ_CP107410.1
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NZ_CP107388.1
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NZ_CP107325.1
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NZ_CP107301.1
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NZ_CP107295.1
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NZ_CP107332.1
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NZ_CP107466.1
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NZ_CP107339.1
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NZ_CP107456.1
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NZ_CP107369.1
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NZ_CP107318.1
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NZ_CP107018.1
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NZ_CP109977.1
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NZ_CP102840.1
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NZ_CP103321.1
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NZ_CP101781.1
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NZ_CP102195.1
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NZ_CP102189.1
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NZ_CP101787.1
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NZ_CP101773.1
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NZ_CP101768.1
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NZ_CP099417.1
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NZ_CP092798.1
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NZ_CP087655.1
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NZ_CP087150.1
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NZ_CP087155.1
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NZ_CP087667.1
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NZ_OM001477.1
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NZ_CP090436.1
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NZ_CP066155.1
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NZ_CP084709.1
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NZ_CP089992.1
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NZ_CP084496.1
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NZ_CP076551.1
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NZ_CP082028.1
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NZ_CP082757.1
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NZ_CP082763.1
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NZ_CP082769.1
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NZ_CP078127.1
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NZ_CP080301.1
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NZ_CP080314.1
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NZ_CP055299.1
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NZ_MW598236.1
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NZ_MW598243.1
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NZ_MW598233.1
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NZ_CP075320.1
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NZ_CP033964.1
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NZ_CP029379.1
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NZ_CP041377.1
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CP038005.1
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CP023932.1
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CP139241.1
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CP139223.1
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NZ_CP133405.1
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NZ_CP137350.1
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NZ_CP136272.1
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NZ_CP134811.1
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CP097475.1
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NZ_CP132052.1
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NZ_CP132046.1
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NZ_CP130691.1
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NZ_CP092276.1
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NZ_CP129818.1
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NZ_CP130268.1
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NZ_CP130262.1
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NZ_CP129813.1
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NZ_CP129745.1
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NZ_CP129709.1
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NZ_CP040715.1
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CP128784.1
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NZ_CP127157.1
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NZ_CP154348.1
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NZ_CP125337.1
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NZ_CP125340.1
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NZ_CP152448.1
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NZ_CP154427.1
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NZ_CP154392.1
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NZ_CP154422.1
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NZ_CP154302.1
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NZ_CP154397.1
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NZ_CP054784.1
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NZ_CP054766.1
See Comparison
NZ_CP054742.1
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NZ_CP054730.1
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NZ_CP054772.1
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NZ_CP138519.1
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NZ_CP147745.1
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NZ_CP147835.1
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NZ_CP147167.1
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NZ_CP146600.1
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NZ_CP146195.1
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NZ_CP142695.1
See Comparison
NZ_CP144306.1
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NZ_CP143303.1
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NZ_CP141785.1
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NZ_CP141803.1
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NZ_CP141670.1
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NZ_CP141604.1
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CP071165.1
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NZ_CP054754.1
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NZ_CP054760.1
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NZ_CP054724.1
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NZ_CP054736.1
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CP050284.1
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NZ_CP039822.1
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NZ_CP039812.1
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NZ_CP102195.1
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NZ_CP069174.1
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NZ_CP063837.1
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NZ_CP063764.1
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NZ_CP119015.1
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NZ_CP107310.1
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NZ_CP107410.1
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NZ_CP107388.1
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NZ_CP107301.1
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NZ_CP107332.1
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NZ_CP107339.1
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NZ_CP109977.1
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NZ_CP103321.1
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NZ_CP066521.1
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NZ_CP066258.1
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NZ_CP107466.1
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NZ_CP107018.1
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NZ_CP102189.1
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NZ_CP101787.1
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NZ_CP101773.1
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NZ_CP101768.1
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NZ_CP066908.1
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NZ_CP099417.1
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NZ_CP082028.1
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NZ_CP102840.1
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NZ_CP087667.1
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NZ_CP087661.1
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NZ_OM001473.1
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NZ_OM001477.1
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NZ_CP092798.1
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NZ_CP066155.1
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NZ_CP089992.1
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NZ_CP084709.1
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NZ_CP082757.1
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NZ_CP082763.1
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NZ_CP087655.1
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NZ_CP095259.1
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NZ_OM001479.1
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NZ_CP087150.1
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NZ_CP087155.1
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NZ_CP090466.1
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NZ_CP090436.1
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NZ_CP085893.1
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NZ_CP084496.1
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NZ_CP078127.1
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NZ_CP080301.1
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NZ_CP080314.1
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NZ_CP076551.1
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NZ_MW598236.1
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NZ_MW598243.1
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NZ_MW598233.1
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NZ_CP075320.1
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NZ_CP055299.1
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NZ_CP072466.1
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NZ_CP134811.1
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NZ_CP041377.1
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NZ_CP033958.1
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NZ_CP040537.1
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CP038005.1
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NZ_CP029379.1
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CP023932.1
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CP139241.1
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CP139223.1
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NZ_CP137350.1
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NZ_CP136272.1
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NZ_CP082769.1
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NZ_CP033964.1
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NZ_CP040549.1
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NZ_CP040543.1
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NZ_CP036308.1
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NZ_CP138519.1
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NZ_CP136851.1
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CP097475.1
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NZ_CP133405.1
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NZ_CP132052.1
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NZ_CP132046.1
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NZ_CP130691.1
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NZ_CP092276.1
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NZ_CP129818.1
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NZ_CP130268.1
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NZ_CP130262.1
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NZ_CP129813.1
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NZ_CP129745.1
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NZ_CP129709.1
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NZ_CP040715.1
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CP128784.1
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NZ_CP152448.1
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NZ_CP127157.1
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NZ_CP125337.1
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NZ_CP125340.1
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NZ_CP154348.1
See Comparison
NZ_CP154427.1
See Comparison
NZ_CP154392.1
See Comparison
NZ_CP154422.1
See Comparison
NZ_CP154302.1
See Comparison
NZ_CP154397.1
See Comparison
NZ_CP147745.1
See Comparison
NZ_CP147835.1
See Comparison
NZ_CP147167.1
See Comparison
NZ_CP146600.1
See Comparison
NZ_CP146195.1
See Comparison
NZ_CP142695.1
See Comparison
NZ_CP144306.1
See Comparison
NZ_CP143303.1
See Comparison
NZ_CP141785.1
See Comparison
NZ_CP141803.1
See Comparison
NZ_CP141670.1
See Comparison
NZ_CP141604.1
See Comparison
NZ_CP119175.1
See Comparison
CP071165.1
See Comparison
NZ_CP054784.1
See Comparison
NZ_CP054736.1
See Comparison
NZ_CP066532.1
See Comparison
NZ_CP066258.1
See Comparison
NZ_CP064256.1
See Comparison
NZ_CP063764.1
See Comparison
NZ_MT090962.1
See Comparison
NZ_CP119015.1
See Comparison
NZ_CP054754.1
See Comparison
NZ_CP054766.1
See Comparison
NZ_CP054742.1
See Comparison
NZ_CP054730.1
See Comparison
NZ_CP054772.1
See Comparison
NZ_CP054760.1
See Comparison
NZ_CP054724.1
See Comparison
CP050284.1
See Comparison
NZ_CP039822.1
See Comparison
NZ_CP039812.1
See Comparison
NZ_CP069174.1
See Comparison
NZ_CP066521.1
See Comparison
NZ_CP064239.1
See Comparison
NZ_CP064245.1
See Comparison
NZ_CP064221.1
See Comparison
NZ_CP063837.1
See Comparison
NZ_CP116907.1
See Comparison
NZ_CP107516.1
See Comparison
NZ_CP107310.1
See Comparison
NZ_CP107350.1
See Comparison
NZ_CP107388.1
See Comparison
NZ_CP107301.1
See Comparison
NZ_CP107410.1
See Comparison
NZ_CP107332.1
See Comparison
NZ_CP107325.1
See Comparison
NZ_CP107295.1
See Comparison
NZ_CP107339.1
See Comparison
NZ_CP107456.1
See Comparison
NZ_CP107369.1
See Comparison
NZ_CP107318.1
See Comparison
NZ_CP107466.1
See Comparison
NZ_CP109952.1
See Comparison
NZ_CP109977.1
See Comparison
NZ_CP103321.1
See Comparison
NZ_CP107018.1
See Comparison
NZ_CP101781.1
See Comparison
NZ_CP102840.1
See Comparison
NZ_CP101787.1
See Comparison
NZ_CP101773.1
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NZ_CP102195.1
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NZ_CP101768.1
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NZ_CP102189.1
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NZ_CP066908.1
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NZ_CP087667.1
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NZ_CP099417.1
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NZ_CP087661.1
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NZ_CP087150.1
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NZ_CP087655.1
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NZ_CP095259.1
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NZ_CP087155.1
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NZ_OM001473.1
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NZ_OM001477.1
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NZ_CP092798.1
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NZ_CP066155.1
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CP023932.1
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NZ_MW598243.1
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NZ_MW598233.1
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NZ_CP033964.1
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NZ_CP040543.1
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CP038005.1
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CP139241.1
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CP139223.1
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NZ_CP136851.1
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NZ_CP136272.1
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NZ_CP133405.1
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NZ_CP134811.1
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NZ_CP130262.1
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NZ_CP132046.1
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CP097475.1
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NZ_CP092276.1
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CP128784.1
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NZ_CP130268.1
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NZ_CP129818.1
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NZ_CP129813.1
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NZ_CP129745.1
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NZ_CP129709.1
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NZ_CP146600.1
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NZ_CP127157.1
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NZ_CP125337.1
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NZ_CP154348.1
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NZ_CP154427.1
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NZ_CP154392.1
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NZ_CP154422.1
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NZ_CP154302.1
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NZ_CP154397.1
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NZ_CP152448.1
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NZ_CP147745.1
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NZ_CP054754.1
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NZ_CP054766.1
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NZ_CP054742.1
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NZ_CP054730.1
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CP071165.1
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CP050284.1
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NZ_CP066521.1
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NZ_CP063764.1
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NZ_CP064245.1
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NZ_CP064221.1
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NZ_MT090962.1
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NZ_CP107310.1
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NZ_CP119175.1
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NZ_CP107516.1
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NZ_CP107332.1
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NZ_CP107350.1
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NZ_CP107325.1
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NZ_CP107410.1
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NZ_CP107388.1
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NZ_CP107301.1
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NZ_CP107295.1
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NZ_CP107369.1
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NZ_CP107318.1
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NZ_CP107456.1
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NZ_CP107466.1
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NZ_CP109977.1
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NZ_CP107339.1
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NZ_CP103321.1
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NZ_CP107018.1
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NZ_CP102195.1
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NZ_CP102840.1
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NZ_CP102189.1
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NZ_CP101781.1
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NZ_CP101787.1
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NZ_CP101768.1
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NZ_CP101773.1
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NZ_CP099417.1
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NZ_CP066908.1
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NZ_CP087667.1
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NZ_CP087661.1
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NZ_CP087655.1
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NZ_CP095259.1
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NZ_CP087150.1
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NZ_OM001479.1
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NZ_CP087155.1
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NZ_OM001473.1
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NZ_OM001477.1
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NZ_CP092798.1
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NZ_CP066155.1
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NZ_CP089992.1
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NZ_CP090466.1
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NZ_CP090436.1
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NZ_CP084709.1
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NZ_CP085893.1
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NZ_CP084496.1
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NZ_CP082757.1
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NZ_CP082028.1
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NZ_CP082763.1
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NZ_CP082769.1
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NZ_MW598236.1
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NZ_CP078127.1
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NZ_CP080301.1
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NZ_CP080314.1
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NZ_MW598243.1
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NZ_CP076551.1
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NZ_MW598233.1
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NZ_CP075320.1
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NZ_CP055299.1
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NZ_CP041377.1
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NZ_CP072466.1
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NZ_CP040537.1
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NZ_CP033964.1
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NZ_CP033958.1
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NZ_CP040549.1
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NZ_CP040543.1
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NZ_CP029379.1
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NZ_CP036308.1
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CP038005.1
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CP139241.1
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CP023932.1
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CP139223.1
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NZ_CP137350.1
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NZ_CP138519.1
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NZ_CP136851.1
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NZ_CP136272.1
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NZ_CP092276.1
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NZ_CP133405.1
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NZ_CP134811.1
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NZ_CP132052.1
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NZ_CP132046.1
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NZ_CP130268.1
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NZ_CP130262.1
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CP097475.1
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NZ_CP130691.1
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NZ_CP129818.1
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NZ_CP129813.1
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NZ_CP129745.1
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NZ_CP129709.1
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CP128784.1
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NZ_CP127157.1
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NZ_CP040715.1
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NZ_CP142695.1
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NZ_CP154392.1
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NZ_CP154422.1
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NZ_CP154302.1
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NZ_CP154397.1
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NZ_CP152448.1
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NZ_CP146600.1
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NZ_CP146195.1
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NZ_CP125337.1
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NZ_CP125340.1
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NZ_CP154348.1
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NZ_CP154427.1
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NZ_CP147745.1
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NZ_CP147835.1
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NZ_CP147167.1
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NZ_CP143303.1
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NZ_CP144306.1
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NZ_CP141803.1
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NZ_CP141670.1
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NZ_CP141604.1
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CP071165.1
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NZ_CP054760.1
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NZ_CP054784.1
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NZ_CP054724.1
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NZ_CP054754.1
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NZ_CP054736.1
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NZ_CP054766.1
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CP050284.1
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NZ_CP054742.1
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NZ_CP054730.1
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NZ_CP054772.1
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NZ_CP066532.1
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NZ_CP039822.1
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NZ_CP039812.1
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NZ_CP069174.1
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NZ_CP066521.1
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NZ_CP063764.1
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NZ_CP066258.1
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NZ_CP064239.1
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NZ_CP064245.1
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NZ_CP064221.1
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NZ_CP141785.1
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NZ_CP064256.1
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NZ_CP107410.1
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NZ_CP107310.1
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NZ_CP107516.1
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NZ_CP063837.1
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NZ_MT090962.1
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NZ_CP119015.1
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NZ_CP119175.1
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NZ_CP116907.1
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NZ_CP107332.1
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NZ_CP107388.1
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NZ_CP107325.1
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NZ_CP107301.1
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NZ_CP107350.1
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NZ_CP109977.1
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NZ_CP107369.1
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NZ_CP107318.1
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NZ_CP107466.1
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NZ_CP107339.1
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NZ_CP107295.1
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NZ_CP107456.1
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NZ_CP107018.1
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NZ_CP103321.1
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NZ_CP102189.1
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NZ_CP101781.1
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NZ_CP102840.1
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NZ_CP101768.1
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NZ_CP101787.1
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NZ_CP102195.1
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NZ_CP101773.1
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NZ_CP087667.1
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NZ_CP066908.1
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NZ_CP099417.1
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NZ_CP087661.1
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NZ_CP087655.1
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NZ_CP087150.1
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NZ_CP095259.1
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NZ_CP087155.1
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NZ_CP066155.1
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NZ_OM001473.1
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NZ_OM001477.1
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NZ_OM001479.1
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NZ_CP092798.1
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NZ_CP090466.1
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NZ_CP090436.1
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NZ_CP089992.1
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NZ_CP085893.1
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NZ_CP082769.1
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NZ_CP084709.1
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NZ_CP084496.1
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NZ_CP082757.1
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NZ_CP082763.1
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NZ_CP080314.1
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NZ_CP082028.1
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NZ_CP078127.1
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NZ_CP080301.1
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NZ_MW598243.1
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NZ_CP076551.1
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NZ_MW598236.1
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NZ_MW598233.1
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NZ_CP075320.1
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NZ_CP055299.1
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NZ_CP072466.1
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Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Biosynthetic Gene Clusters
based on ANTISMASH
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore