Plasmid NZ_CP082983.1

Sequence

Nucleotide Information

Accession	NZ_CP082983.1
Description	Klebsiella pneumoniae strain BD-13 plasmid p5-BD-13, complete sequence
Source	refseq
Topology	circular
Length	4052 bp
GC Content	0.54 %
Created at NCBI	Dec. 11, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (573)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_021137635.1
Assembly Coverage	662.141

Biosample

Curated Collection Information

Accession	21016508

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	46.9321N;7.4199E
Original Query Type	coordinates
Coordinates (Lat/Lon)	46.93/7.42
Address	Labor Dr. Risch, Kohlenweg, Liebefeld, Köniz, Bern-Mittelland administrative district, Bernese Mittelland administrative region, Bern, 3097, Switzerland

ECOSYSTEM

Original Query	Homo sapiens
Classification	host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP041088.1	See Comparison
NZ_CP137402.1	See Comparison
NZ_CP125206.1	See Comparison
NZ_CP125124.1	See Comparison
NZ_CP125178.1	See Comparison
NZ_CP125143.1	See Comparison
NZ_CP125199.1	See Comparison
NZ_CP125130.1	See Comparison
NZ_CP125136.1	See Comparison
NZ_CP143505.1	See Comparison
NZ_OW970379.1	See Comparison
CP052195.1	See Comparison
NZ_CP063006.1	See Comparison
NZ_CP091614.1	See Comparison
NZ_OW970450.1	See Comparison
NZ_CP086421.1	See Comparison
OW969818.1	See Comparison
OW969811.1	See Comparison
OW967894.1	See Comparison
NZ_CP086437.1	See Comparison
NZ_CP091614.1	See Comparison
NZ_CP090396.1	See Comparison
NZ_CP090392.1	See Comparison
NZ_CP083024.1	See Comparison
NZ_CP087709.1	See Comparison
NZ_CP018453.1	See Comparison
NZ_CP041088.1	See Comparison
NZ_CP137402.1	See Comparison
NZ_CP125206.1	See Comparison
NZ_CP063006.1	See Comparison
NZ_CP083019.1	See Comparison
NZ_CP082973.1	See Comparison
NZ_CP083030.1	See Comparison
NZ_CP071089.1	See Comparison
NZ_CP018740.1	See Comparison
NZ_CP125124.1	See Comparison
NZ_CP125178.1	See Comparison
NZ_CP125143.1	See Comparison
NZ_CP125199.1	See Comparison
NZ_CP125130.1	See Comparison
NZ_CP125136.1	See Comparison
NZ_CP143505.1	See Comparison
CP052195.1	See Comparison
NZ_CP071089.1	See Comparison
NZ_OW970450.1	See Comparison
NZ_OW970379.1	See Comparison
OW967894.1	See Comparison
NZ_CP086421.1	See Comparison
NZ_CP086437.1	See Comparison
OW969818.1	See Comparison
OW969811.1	See Comparison
NZ_CP090396.1	See Comparison
NZ_CP090392.1	See Comparison
NZ_CP083019.1	See Comparison
NZ_CP082973.1	See Comparison
NZ_CP083030.1	See Comparison
NZ_CP083024.1	See Comparison
NZ_CP087709.1	See Comparison
NZ_CP018453.1	See Comparison
NZ_CP018740.1	See Comparison
NZ_CP041088.1	See Comparison
NZ_CP125206.1	See Comparison
NZ_CP137402.1	See Comparison
NZ_CP143505.1	See Comparison
NZ_CP125124.1	See Comparison
NZ_CP125178.1	See Comparison
NZ_CP125143.1	See Comparison
NZ_CP125199.1	See Comparison
NZ_CP125130.1	See Comparison
NZ_CP125136.1	See Comparison
CP052195.1	See Comparison
NZ_CP063006.1	See Comparison
NZ_OW970379.1	See Comparison
NZ_CP091614.1	See Comparison
NZ_OW970450.1	See Comparison
OW967894.1	See Comparison
OW969818.1	See Comparison
OW969811.1	See Comparison
NZ_CP018740.1	See Comparison
NZ_CP086421.1	See Comparison
NZ_CP086437.1	See Comparison
NZ_CP083019.1	See Comparison
NZ_CP082973.1	See Comparison
NZ_CP083030.1	See Comparison
NZ_CP071089.1	See Comparison
NZ_CP090396.1	See Comparison
NZ_CP090392.1	See Comparison
NZ_CP082983.1	See Comparison
NZ_CP083024.1	See Comparison
NZ_CP087709.1	See Comparison
NZ_CP018453.1	See Comparison
NZ_CP137402.1	See Comparison
NZ_CP041088.1	See Comparison
CP052195.1	See Comparison
NZ_CP143505.1	See Comparison
NZ_CP125206.1	See Comparison
NZ_CP125124.1	See Comparison
NZ_CP125178.1	See Comparison
NZ_CP125143.1	See Comparison
NZ_CP125199.1	See Comparison
NZ_CP125130.1	See Comparison
NZ_CP125136.1	See Comparison
NZ_CP091614.1	See Comparison
NZ_CP063006.1	See Comparison
NZ_CP018453.1	See Comparison
NZ_OW970379.1	See Comparison
OW969818.1	See Comparison
OW969811.1	See Comparison
OW967894.1	See Comparison
NZ_CP071089.1	See Comparison
NZ_CP018740.1	See Comparison
NZ_OW970450.1	See Comparison
NZ_CP086421.1	See Comparison
NZ_CP086437.1	See Comparison
NZ_CP090396.1	See Comparison
NZ_CP090392.1	See Comparison
NZ_CP083019.1	See Comparison
NZ_CP082973.1	See Comparison
NZ_CP083030.1	See Comparison
NZ_CP083024.1	See Comparison
NZ_CP087709.1	See Comparison
NZ_CP041088.1	See Comparison
NZ_CP125206.1	See Comparison
NZ_CP137402.1	See Comparison
NZ_CP125124.1	See Comparison
NZ_CP125178.1	See Comparison
NZ_CP125143.1	See Comparison
NZ_CP125199.1	See Comparison
NZ_CP125130.1	See Comparison
NZ_CP125136.1	See Comparison
NZ_CP063006.1	See Comparison
NZ_CP143505.1	See Comparison
CP052195.1	See Comparison
NZ_OW970450.1	See Comparison
NZ_CP091614.1	See Comparison
NZ_OW970379.1	See Comparison
OW969818.1	See Comparison
OW969811.1	See Comparison
NZ_CP086421.1	See Comparison
OW967894.1	See Comparison
NZ_CP086437.1	See Comparison
NZ_CP041088.1	See Comparison
NZ_CP018453.1	See Comparison
NZ_CP090396.1	See Comparison
NZ_CP090392.1	See Comparison
NZ_CP083019.1	See Comparison
NZ_CP082973.1	See Comparison
NZ_CP083030.1	See Comparison
NZ_CP083024.1	See Comparison
NZ_CP087709.1	See Comparison
NZ_CP071089.1	See Comparison
NZ_CP018740.1	See Comparison
CP052195.1	See Comparison
NZ_CP125206.1	See Comparison
NZ_CP125124.1	See Comparison
NZ_CP125178.1	See Comparison
NZ_CP125143.1	See Comparison
NZ_CP125199.1	See Comparison
NZ_CP125130.1	See Comparison
NZ_CP125136.1	See Comparison
NZ_CP137402.1	See Comparison
NZ_CP143505.1	See Comparison
NZ_OW970379.1	See Comparison
NZ_CP063006.1	See Comparison
NZ_OW970450.1	See Comparison
NZ_CP091614.1	See Comparison
OW969818.1	See Comparison
OW969811.1	See Comparison
OW967894.1	See Comparison
NZ_CP086437.1	See Comparison
NZ_CP086421.1	See Comparison
NZ_CP083019.1	See Comparison
NZ_CP090396.1	See Comparison
NZ_CP090392.1	See Comparison
NZ_CP082973.1	See Comparison
NZ_CP083030.1	See Comparison
NZ_CP071089.1	See Comparison
NZ_CP083024.1	See Comparison
NZ_CP087709.1	See Comparison
NZ_CP018740.1	See Comparison
NZ_CP018453.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore