Plasmid NZ_CP091614.1

Sequence

Nucleotide Information

Accession NZ_CP091614.1
Description Salmonella enterica strain 1795 plasmid p1795-3, complete sequence
Source refseq
Topology circular
Length 4052 bp
GC Content 0.54 %
Created at NCBI Dec. 17, 2022



Assembly

Genome Data Information

Accession GCF_026873345.1
Assembly Coverage 100


Biosample

Curated Collection Information
Accession 25270679

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,Hangzhou
Original Query Type name
Coordinates (Lat/Lon) 30.25/120.21
Address China,Hangzhou

ECOSYSTEM
Original Query Homo sapiens,feces
Classification fecal,gastrointestinal_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query enteritis
DOID/SYMP
  • Intestinal disease (DOID:5295 )
    • A gastrointestinal system disease that is located_in the intestine.
  • Enteritis (SYMP:0000039 )
    • Enteritis is a digestive system symptom involving the inflammation of the small intestines and especially of the human ileum.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

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NZ_CP125206.1 See Comparison
NZ_CP125124.1 See Comparison
NZ_CP125178.1 See Comparison
NZ_CP125143.1 See Comparison
NZ_CP125199.1 See Comparison
NZ_CP125130.1 See Comparison
NZ_CP125136.1 See Comparison
NZ_CP143505.1 See Comparison
CP052195.1 See Comparison
NZ_OW970450.1 See Comparison
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OW967894.1 See Comparison
NZ_OW970379.1 See Comparison
OW969818.1 See Comparison
OW969811.1 See Comparison
NZ_CP090396.1 See Comparison
NZ_CP086421.1 See Comparison
NZ_CP086437.1 See Comparison
NZ_CP090392.1 See Comparison
NZ_CP083019.1 See Comparison
NZ_CP082973.1 See Comparison
NZ_CP083030.1 See Comparison
NZ_CP082983.1 See Comparison
NZ_CP083024.1 See Comparison
NZ_CP071089.1 See Comparison
NZ_CP087709.1 See Comparison
NZ_CP041088.1 See Comparison
NZ_CP018740.1 See Comparison
NZ_CP137402.1 See Comparison
NZ_CP125124.1 See Comparison
NZ_CP125206.1 See Comparison
NZ_CP125199.1 See Comparison
NZ_CP125178.1 See Comparison
NZ_CP125130.1 See Comparison
NZ_CP125136.1 See Comparison
NZ_CP125143.1 See Comparison
NZ_CP087709.1 See Comparison
NZ_CP143505.1 See Comparison
NZ_CP063006.1 See Comparison
OW969818.1 See Comparison
OW969811.1 See Comparison
NZ_CP086421.1 See Comparison
NZ_CP086437.1 See Comparison
CP052195.1 See Comparison
NZ_OW970450.1 See Comparison
NZ_OW970379.1 See Comparison
OW967894.1 See Comparison
NZ_CP090396.1 See Comparison
NZ_CP090392.1 See Comparison
NZ_CP083019.1 See Comparison
NZ_CP082973.1 See Comparison
NZ_CP083030.1 See Comparison
NZ_CP082983.1 See Comparison
NZ_CP083024.1 See Comparison
NZ_CP018740.1 See Comparison
NZ_CP071089.1 See Comparison
NZ_CP041088.1 See Comparison
NZ_CP137402.1 See Comparison
NZ_CP125206.1 See Comparison
NZ_CP125199.1 See Comparison
NZ_CP125130.1 See Comparison
NZ_CP125136.1 See Comparison
NZ_CP143505.1 See Comparison
NZ_CP125124.1 See Comparison
NZ_CP125178.1 See Comparison
NZ_CP125143.1 See Comparison
NZ_CP063006.1 See Comparison
CP052195.1 See Comparison
NZ_OW970450.1 See Comparison
NZ_OW970379.1 See Comparison
NZ_CP090396.1 See Comparison
OW969818.1 See Comparison
OW969811.1 See Comparison
OW967894.1 See Comparison
NZ_CP086421.1 See Comparison
NZ_CP086437.1 See Comparison
NZ_CP090392.1 See Comparison
NZ_CP082973.1 See Comparison
NZ_CP083030.1 See Comparison
NZ_CP082983.1 See Comparison
NZ_CP083024.1 See Comparison
NZ_CP083019.1 See Comparison
NZ_CP018740.1 See Comparison
NZ_CP087709.1 See Comparison
NZ_CP071089.1 See Comparison
NZ_CP041088.1 See Comparison
NZ_CP125206.1 See Comparison
NZ_CP137402.1 See Comparison
NZ_CP125130.1 See Comparison
NZ_CP125136.1 See Comparison
NZ_CP143505.1 See Comparison
NZ_CP125124.1 See Comparison
NZ_CP125178.1 See Comparison
NZ_CP125143.1 See Comparison
NZ_CP125199.1 See Comparison
CP052195.1 See Comparison
NZ_OW970379.1 See Comparison
NZ_OW970450.1 See Comparison
NZ_CP063006.1 See Comparison
NZ_CP071089.1 See Comparison
NZ_CP083019.1 See Comparison
NZ_CP087709.1 See Comparison
OW969818.1 See Comparison
OW969811.1 See Comparison
OW967894.1 See Comparison
NZ_CP086421.1 See Comparison
NZ_CP086437.1 See Comparison
NZ_CP090396.1 See Comparison
NZ_CP090392.1 See Comparison
NZ_CP082973.1 See Comparison
NZ_CP083030.1 See Comparison
NZ_CP082983.1 See Comparison
NZ_CP083024.1 See Comparison
NZ_CP018740.1 See Comparison
NZ_CP137402.1 See Comparison
NZ_CP041088.1 See Comparison
NZ_CP125206.1 See Comparison
NZ_CP125124.1 See Comparison
NZ_CP125178.1 See Comparison
NZ_CP125143.1 See Comparison
NZ_CP125199.1 See Comparison
NZ_CP125130.1 See Comparison
NZ_CP125136.1 See Comparison
CP052195.1 See Comparison
NZ_CP143505.1 See Comparison
NZ_OW970379.1 See Comparison
NZ_OW970450.1 See Comparison
NZ_CP063006.1 See Comparison
NZ_CP086421.1 See Comparison
OW969818.1 See Comparison
OW969811.1 See Comparison
OW967894.1 See Comparison
NZ_CP086437.1 See Comparison
NZ_CP090396.1 See Comparison
NZ_CP090392.1 See Comparison
NZ_CP082973.1 See Comparison
NZ_CP083030.1 See Comparison
NZ_CP082983.1 See Comparison
NZ_CP083024.1 See Comparison
NZ_CP083019.1 See Comparison
NZ_CP125206.1 See Comparison
NZ_CP087709.1 See Comparison
NZ_CP071089.1 See Comparison
NZ_CP018740.1 See Comparison
NZ_CP041088.1 See Comparison
NZ_CP137402.1 See Comparison
NZ_CP125178.1 See Comparison
NZ_CP125143.1 See Comparison
NZ_CP125199.1 See Comparison
NZ_CP125130.1 See Comparison
NZ_CP125136.1 See Comparison
NZ_OW970450.1 See Comparison
NZ_CP143505.1 See Comparison
NZ_CP125124.1 See Comparison
CP052195.1 See Comparison
NZ_CP063006.1 See Comparison
NZ_CP091614.1 See Comparison
OW967894.1 See Comparison
NZ_OW970379.1 See Comparison
OW969818.1 See Comparison
OW969811.1 See Comparison
NZ_CP082983.1 See Comparison
NZ_CP086421.1 See Comparison
NZ_CP086437.1 See Comparison
NZ_CP090396.1 See Comparison
NZ_CP090392.1 See Comparison
NZ_CP083019.1 See Comparison
NZ_CP082973.1 See Comparison
NZ_CP083024.1 See Comparison
NZ_CP083030.1 See Comparison
NZ_CP071089.1 See Comparison
NZ_CP087709.1 See Comparison
NZ_CP041088.1 See Comparison
NZ_CP018740.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore