Plasmid NZ_CP076696.1

Sequence

Nucleotide Information

Accession NZ_CP076696.1
Description Escherichia coli strain S103EC plasmid pS103EC_B, complete sequence
Source refseq
Topology circular
Length 5168 bp
GC Content 0.48 %
Created at NCBI June 23, 2021



Assembly

Genome Data Information

Accession GCF_018972265.1
Assembly Coverage 149


Biosample

Curated Collection Information

Accession 19700014

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Australia,Brisbane
Original Query Type name
Coordinates (Lat/Lon) -27.47/153.02
Address Australia,Brisbane

ECOSYSTEM
Original Query Homo sapiens
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization


Plasmids from same Biosample



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NZ_CP139802.1 See Comparison
NZ_CP056331.1 See Comparison
NZ_CP054217.1 See Comparison
NZ_CP054222.1 See Comparison
CP052323.1 See Comparison
CP054339.1 See Comparison
NZ_MG649065.1 See Comparison
NZ_CP053249.1 See Comparison
CP052222.1 See Comparison
NZ_CP069830.1 See Comparison
NZ_CP031132.1 See Comparison
NZ_CP041341.1 See Comparison
NZ_CP070180.1 See Comparison
NZ_CP069870.1 See Comparison
NZ_CP069983.1 See Comparison
NZ_CP070013.1 See Comparison
NZ_CP070114.1 See Comparison
NZ_LR890331.1 See Comparison
NZ_LR890695.1 See Comparison
NZ_AP022329.1 See Comparison
NZ_LR890338.1 See Comparison
NZ_CP063777.1 See Comparison
NZ_AP022167.1 See Comparison
NZ_AP022051.1 See Comparison
NZ_AP022034.1 See Comparison
NZ_AP022047.1 See Comparison
NZ_AP022100.1 See Comparison
NZ_AP022180.1 See Comparison
NZ_AP022067.1 See Comparison
NZ_AP021966.1 See Comparison
NZ_AP022001.1 See Comparison
NZ_OP378613.1 See Comparison
NZ_CP049125.1 See Comparison
NZ_CP051619.1 See Comparison
NZ_AP022074.1 See Comparison
NZ_CP074489.1 See Comparison
NZ_OP242258.1 See Comparison
NZ_CP095527.1 See Comparison
NZ_CP116149.1 See Comparison
NZ_CP116130.1 See Comparison
NZ_CP116185.1 See Comparison
NZ_CP116139.1 See Comparison
NZ_CP113490.1 See Comparison
NZ_CP109879.1 See Comparison
NZ_CP099757.1 See Comparison
NZ_CP104670.1 See Comparison
NZ_CP051664.1 See Comparison
NZ_CP103472.1 See Comparison
NZ_CP103525.1 See Comparison
NZ_CP103483.1 See Comparison
NZ_CP103595.1 See Comparison
OW967385.1 See Comparison
NZ_CP091759.1 See Comparison
NZ_CP091708.1 See Comparison
NZ_CP091687.1 See Comparison
CP090256.1 See Comparison
CP088455.1 See Comparison
CP088368.1 See Comparison
NZ_CP076696.1 See Comparison
AP024698.1 See Comparison
NZ_CP014318.1 See Comparison
NZ_CP071078.1 See Comparison
NZ_CP018967.1 See Comparison
NZ_CP012637.1 See Comparison
NZ_CP010879.1 See Comparison
NZ_LR130561.1 See Comparison
NC_022649.1 See Comparison
NZ_CP032876.1 See Comparison
NZ_CP034960.1 See Comparison
NZ_CP035126.1 See Comparison
NZ_CP023848.1 See Comparison
NZ_CP023831.1 See Comparison


Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore