PLSDB
v. 2024_05_31_v2
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Typing
Plasmid NZ_CP070532.1
Sequence
Nucleotide Information
Accession
NZ_CP070532.1
Description
Enterobacter hormaechei strain EC48293 plasmid p48293_Col, complete sequence
Source
refseq
Topology
circular
Length
4096 bp
GC Content
0.56 %
Created at NCBI
Feb. 26, 2021
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Enterobacter hormaechei (158836)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Enterobacter (547)
Species
Enterobacter_hormaechei (158836)
Strain
Assembly
Genome Data Information
Accession
GCF_016939555.1
Assembly Coverage
250
Biosample
Curated Collection Information
Accession
16933270
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
50.07N;14.35E
Original Query Type
coordinates
Coordinates (Lat/Lon)
50.07/14.35
Address
BrdlĂkova, Motol, Prague, obvod Praha 5, Prague, 150 06, Czechia
ECOSYSTEM
Original Query
Homo sapiens,Sputum-aspirate
Classification
host_associated,respiratory_system
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
Thoracic aortic aneurysm, ruptured
DOID/SYMP
Thoracic aortic aneurysm
(
DOID:14004
)
An aortic aneurysm that is located_in the thoracic aorta.
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_CP070533.1
NZ_CP070531.1
NZ_CP070530.1
Similar Plasmids
based on Mash distance
AP024920.1
See Comparison
AP024915.1
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CP073308.1
See Comparison
NZ_CP016528.1
See Comparison
NZ_CP044113.1
See Comparison
NZ_AP019693.1
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NZ_CP039274.1
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NZ_CP033827.1
See Comparison
NZ_CP030192.1
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NZ_CP030227.1
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NZ_CP030009.1
See Comparison
NZ_CP029125.1
See Comparison
CP123779.1
See Comparison
NZ_CP147671.1
See Comparison
CP056179.1
See Comparison
NZ_CP058179.1
See Comparison
OW968022.1
See Comparison
NZ_CP070532.1
See Comparison
NZ_CP065844.1
See Comparison
NZ_CP103686.1
See Comparison
NZ_CP103682.1
See Comparison
OW969707.1
See Comparison
CP065861.1
See Comparison
NZ_CP028857.1
See Comparison
NZ_CP056696.1
See Comparison
NZ_CP099321.1
See Comparison
AP024920.1
See Comparison
OW849329.1
See Comparison
OW849311.1
See Comparison
AP024915.1
See Comparison
CP073308.1
See Comparison
NZ_CP016528.1
See Comparison
NZ_CP044113.1
See Comparison
NZ_CP039274.1
See Comparison
NZ_AP019693.1
See Comparison
NZ_CP030227.1
See Comparison
NZ_CP033827.1
See Comparison
NZ_CP030009.1
See Comparison
NZ_CP030192.1
See Comparison
NZ_CP147671.1
See Comparison
CP123779.1
See Comparison
NZ_CP029125.1
See Comparison
NZ_CP058179.1
See Comparison
CP065861.1
See Comparison
CP056179.1
See Comparison
NZ_CP065844.1
See Comparison
NZ_CP056696.1
See Comparison
NZ_CP099321.1
See Comparison
NZ_CP028857.1
See Comparison
NZ_CP016528.1
See Comparison
NZ_CP103686.1
See Comparison
NZ_CP103682.1
See Comparison
OW968022.1
See Comparison
AP024920.1
See Comparison
AP024915.1
See Comparison
OW969707.1
See Comparison
OW849329.1
See Comparison
OW849311.1
See Comparison
CP073308.1
See Comparison
NZ_AP019693.1
See Comparison
NZ_CP044113.1
See Comparison
NZ_CP033827.1
See Comparison
NZ_CP039274.1
See Comparison
NZ_CP030192.1
See Comparison
NZ_CP030009.1
See Comparison
NZ_CP030227.1
See Comparison
NZ_CP147671.1
See Comparison
NZ_CP029125.1
See Comparison
CP123779.1
See Comparison
CP056179.1
See Comparison
NZ_CP058179.1
See Comparison
NZ_CP028857.1
See Comparison
CP065861.1
See Comparison
NZ_CP065844.1
See Comparison
NZ_CP103686.1
See Comparison
NZ_CP056696.1
See Comparison
NZ_CP099321.1
See Comparison
NZ_CP103682.1
See Comparison
OW968022.1
See Comparison
OW969707.1
See Comparison
CP073308.1
See Comparison
OW849329.1
See Comparison
OW849311.1
See Comparison
AP024920.1
See Comparison
AP024915.1
See Comparison
NZ_CP030192.1
See Comparison
NZ_CP044113.1
See Comparison
NZ_AP019693.1
See Comparison
NZ_CP030009.1
See Comparison
NZ_CP016528.1
See Comparison
NZ_CP039274.1
See Comparison
NZ_CP033827.1
See Comparison
NZ_CP030227.1
See Comparison
NZ_CP058179.1
See Comparison
NZ_CP029125.1
See Comparison
CP123779.1
See Comparison
NZ_CP147671.1
See Comparison
CP065861.1
See Comparison
CP056179.1
See Comparison
NZ_CP065844.1
See Comparison
NZ_CP056696.1
See Comparison
NZ_CP028857.1
See Comparison
NZ_CP099321.1
See Comparison
NZ_CP147671.1
See Comparison
NZ_CP103686.1
See Comparison
NZ_CP103682.1
See Comparison
OW969707.1
See Comparison
CP073308.1
See Comparison
NZ_CP016528.1
See Comparison
NZ_CP044113.1
See Comparison
NZ_CP039274.1
See Comparison
NZ_CP033827.1
See Comparison
NZ_CP030192.1
See Comparison
NZ_CP030227.1
See Comparison
NZ_CP030009.1
See Comparison
CP123779.1
See Comparison
OW968022.1
See Comparison
OW849329.1
See Comparison
OW849311.1
See Comparison
AP024920.1
See Comparison
AP024915.1
See Comparison
NZ_AP019693.1
See Comparison
NZ_CP029125.1
See Comparison
CP056179.1
See Comparison
NZ_CP058179.1
See Comparison
OW969707.1
See Comparison
CP065861.1
See Comparison
NZ_CP065844.1
See Comparison
NZ_CP028857.1
See Comparison
NZ_CP056696.1
See Comparison
NZ_CP099321.1
See Comparison
NZ_CP103686.1
See Comparison
NZ_CP103682.1
See Comparison
OW849329.1
See Comparison
OW968022.1
See Comparison
OW849311.1
See Comparison
AP024920.1
See Comparison
AP024915.1
See Comparison
NZ_CP033827.1
See Comparison
CP073308.1
See Comparison
NZ_CP044113.1
See Comparison
NZ_CP039274.1
See Comparison
NZ_CP016528.1
See Comparison
NZ_AP019693.1
See Comparison
NZ_CP030192.1
See Comparison
NZ_CP030227.1
See Comparison
NZ_CP030009.1
See Comparison
CP123779.1
See Comparison
NZ_CP029125.1
See Comparison
NZ_CP147671.1
See Comparison
NZ_CP099321.1
See Comparison
NZ_CP058179.1
See Comparison
CP056179.1
See Comparison
CP065861.1
See Comparison
NZ_CP065844.1
See Comparison
NZ_CP028857.1
See Comparison
OW968022.1
See Comparison
NZ_CP103682.1
See Comparison
OW969707.1
See Comparison
NZ_CP056696.1
See Comparison
NZ_CP103686.1
See Comparison
OW849329.1
See Comparison
OW849311.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore