Plasmid AP024915.1

Sequence

Nucleotide Information

Accession	AP024915.1
Description	Enterobacter cloacae SL264 plasmid pSL264small DNA, complete sequence
Source	insd
Topology	circular
Length	4096 bp
GC Content	0.56 %
Created at NCBI	Oct. 1, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Enterobacter cloacae (550)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Enterobacter (547)
Species	Enterobacter_cloacae (550)
Strain

Biosample

Curated Collection Information

Accession	21986600

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	Japan,Tokyo
Original Query Type	name
Coordinates (Lat/Lon)	34.70/139.40
Address	Japan,Tokyo

ECOSYSTEM

Original Query	Homo sapiens
Classification	host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	Pancreatitis
DOID/SYMP	Pancreatitis (DOID:4989 ) A pancreas disease that is characterized by inflammation of the pancreas.

Visualization

Plasmids from same Biosample

AP024914.1

Similar Plasmids

based on Mash distance

NZ_CP033827.1	See Comparison
NZ_CP030192.1	See Comparison
NZ_CP030227.1	See Comparison
NZ_CP030009.1	See Comparison
NZ_CP029125.1	See Comparison
CP123779.1	See Comparison
NZ_CP147671.1	See Comparison
NZ_CP058179.1	See Comparison
CP056179.1	See Comparison
OW849329.1	See Comparison
NZ_CP056696.1	See Comparison
NZ_CP099321.1	See Comparison
NZ_CP070532.1	See Comparison
CP065861.1	See Comparison
NZ_CP065844.1	See Comparison
NZ_CP028857.1	See Comparison
NZ_CP103686.1	See Comparison
NZ_CP103682.1	See Comparison
OW969707.1	See Comparison
OW968022.1	See Comparison
AP024920.1	See Comparison
OW849311.1	See Comparison
NZ_CP033827.1	See Comparison
CP073308.1	See Comparison
NZ_CP044113.1	See Comparison
NZ_CP039274.1	See Comparison
NZ_CP016528.1	See Comparison
NZ_AP019693.1	See Comparison
NZ_CP030192.1	See Comparison
NZ_CP030227.1	See Comparison
NZ_CP030009.1	See Comparison
NZ_CP058179.1	See Comparison
NZ_CP029125.1	See Comparison
CP123779.1	See Comparison
NZ_CP147671.1	See Comparison
NZ_CP028857.1	See Comparison
CP056179.1	See Comparison
NZ_CP070532.1	See Comparison
CP065861.1	See Comparison
NZ_CP065844.1	See Comparison
OW968022.1	See Comparison
NZ_CP103686.1	See Comparison
NZ_CP103682.1	See Comparison
OW969707.1	See Comparison
NZ_CP056696.1	See Comparison
NZ_CP099321.1	See Comparison
AP024920.1	See Comparison
OW849329.1	See Comparison
OW849311.1	See Comparison
AP024915.1	See Comparison
CP073308.1	See Comparison
NZ_CP016528.1	See Comparison
NZ_AP019693.1	See Comparison
NZ_CP044113.1	See Comparison
NZ_CP029125.1	See Comparison
NZ_CP039274.1	See Comparison
NZ_CP030227.1	See Comparison
NZ_CP030009.1	See Comparison
NZ_CP033827.1	See Comparison
NZ_CP030192.1	See Comparison
CP065861.1	See Comparison
NZ_CP147671.1	See Comparison
CP056179.1	See Comparison
CP123779.1	See Comparison
NZ_CP058179.1	See Comparison
NZ_CP070532.1	See Comparison
NZ_CP065844.1	See Comparison
NZ_CP056696.1	See Comparison
NZ_CP099321.1	See Comparison
NZ_CP028857.1	See Comparison
NZ_CP033827.1	See Comparison
NZ_CP103686.1	See Comparison
NZ_CP103682.1	See Comparison
OW968022.1	See Comparison
CP073308.1	See Comparison
NZ_CP044113.1	See Comparison
NZ_CP039274.1	See Comparison
OW969707.1	See Comparison
OW849329.1	See Comparison
OW849311.1	See Comparison
AP024920.1	See Comparison
NZ_CP016528.1	See Comparison
NZ_AP019693.1	See Comparison
NZ_CP030192.1	See Comparison
NZ_CP030009.1	See Comparison
NZ_CP030227.1	See Comparison
NZ_CP058179.1	See Comparison
NZ_CP147671.1	See Comparison
CP056179.1	See Comparison
NZ_CP029125.1	See Comparison
CP123779.1	See Comparison
NZ_CP028857.1	See Comparison
NZ_CP070532.1	See Comparison
CP065861.1	See Comparison
NZ_CP065844.1	See Comparison
NZ_CP103686.1	See Comparison
NZ_CP056696.1	See Comparison
NZ_CP099321.1	See Comparison
NZ_CP103682.1	See Comparison
OW968022.1	See Comparison
OW969707.1	See Comparison
NZ_CP016528.1	See Comparison
OW849329.1	See Comparison
OW849311.1	See Comparison
AP024920.1	See Comparison
CP073308.1	See Comparison
NZ_CP029125.1	See Comparison
NZ_AP019693.1	See Comparison
NZ_CP033827.1	See Comparison
NZ_CP030192.1	See Comparison
NZ_CP030227.1	See Comparison
NZ_CP044113.1	See Comparison
NZ_CP039274.1	See Comparison
NZ_CP030009.1	See Comparison
NZ_CP147671.1	See Comparison
CP123779.1	See Comparison
NZ_CP070532.1	See Comparison
CP056179.1	See Comparison
NZ_CP058179.1	See Comparison
NZ_CP056696.1	See Comparison
NZ_CP028857.1	See Comparison
CP065861.1	See Comparison
NZ_CP065844.1	See Comparison
NZ_CP099321.1	See Comparison
OW969707.1	See Comparison
NZ_CP103686.1	See Comparison
NZ_CP103682.1	See Comparison
OW849329.1	See Comparison
OW968022.1	See Comparison
OW849311.1	See Comparison
NZ_CP016528.1	See Comparison
CP073308.1	See Comparison
AP024920.1	See Comparison
NZ_AP019693.1	See Comparison
NZ_CP044113.1	See Comparison
NZ_CP029125.1	See Comparison
NZ_CP039274.1	See Comparison
NZ_CP033827.1	See Comparison
NZ_CP030192.1	See Comparison
NZ_CP030227.1	See Comparison
NZ_CP058179.1	See Comparison
NZ_CP030009.1	See Comparison
CP123779.1	See Comparison
NZ_CP147671.1	See Comparison
CP065861.1	See Comparison
NZ_CP070532.1	See Comparison
CP056179.1	See Comparison
NZ_CP065844.1	See Comparison
NZ_CP028857.1	See Comparison
NZ_CP056696.1	See Comparison
NZ_CP099321.1	See Comparison
OW969707.1	See Comparison
NZ_CP103686.1	See Comparison
NZ_CP103682.1	See Comparison
OW849329.1	See Comparison
OW968022.1	See Comparison
OW849311.1	See Comparison
AP024920.1	See Comparison
CP073308.1	See Comparison
NZ_CP044113.1	See Comparison
NZ_CP016528.1	See Comparison
NZ_CP039274.1	See Comparison
NZ_AP019693.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore