Plasmid NZ_CP070125.1

Sequence

Nucleotide Information

Accession	NZ_CP070125.1
Description	Escherichia coli strain FDAARGOS_1292 plasmid unnamed1, complete sequence
Source	refseq
Topology	circular
Length	114213 bp
GC Content	0.51 %
Created at NCBI	Feb. 23, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Escherichia coli (562)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Escherichia (561)
Species	Escherichia_coli (562)
Strain

Assembly

Genome Data Information

Accession	GCF_016904475.1
Assembly Coverage	1353.32

Biosample

Curated Collection Information

Accession	16357434

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	USA,WA
Original Query Type	name
Coordinates (Lat/Lon)	47.29/-120.21
Address	USA,WA

ECOSYSTEM

Original Query	Homo sapiens
Classification	host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP047742.1	See Comparison
CP048858.1	See Comparison
NZ_CP116410.1	See Comparison
NZ_CP114307.1	See Comparison
NZ_CP095515.1	See Comparison
NZ_CP076688.1	See Comparison
NZ_CP073622.1	See Comparison
NZ_CP012634.1	See Comparison
NZ_CP076124.1	See Comparison
NC_017630.1	See Comparison
NZ_CP014523.1	See Comparison
NZ_CP014496.1	See Comparison
CP007150.1	See Comparison
NC_013655.1	See Comparison
NC_013175.1	See Comparison
NC_007941.1	See Comparison
NZ_CP028321.1	See Comparison
NZ_LR130563.1	See Comparison
NZ_CP146662.1	See Comparison
NZ_CP014110.1	See Comparison
NZ_CP122455.1	See Comparison
NZ_CP122452.1	See Comparison
NZ_CP122449.1	See Comparison
NZ_OZ040556.1	See Comparison
NZ_OZ038880.1	See Comparison
NZ_OZ040275.1	See Comparison
NZ_OZ040540.1	See Comparison
NZ_OZ039821.1	See Comparison
NZ_CP082046.1	See Comparison
NZ_AP029001.1	See Comparison
CP056570.1	See Comparison
NZ_CP051712.1	See Comparison
NZ_CP053246.1	See Comparison
NZ_CP051736.1	See Comparison
NZ_CP051715.1	See Comparison
NZ_CP070125.1	See Comparison
NZ_CP070042.1	See Comparison
NZ_CP069891.1	See Comparison
NZ_CP069454.1	See Comparison
NZ_CP070065.1	See Comparison
NZ_CP073622.1	See Comparison
NZ_CP069448.1	See Comparison
NZ_CP047742.1	See Comparison
CP048858.1	See Comparison
NZ_CP116410.1	See Comparison
NZ_CP095515.1	See Comparison
NZ_CP114307.1	See Comparison
NZ_CP014523.1	See Comparison
NZ_CP076688.1	See Comparison
NZ_CP076124.1	See Comparison
NZ_CP014496.1	See Comparison
NZ_CP012634.1	See Comparison
CP007150.1	See Comparison
NC_013655.1	See Comparison
NC_017630.1	See Comparison
NC_013175.1	See Comparison
NZ_CP082046.1	See Comparison
NC_007941.1	See Comparison
NZ_CP028321.1	See Comparison
NZ_LR130563.1	See Comparison
NZ_CP014110.1	See Comparison
NZ_CP122455.1	See Comparison
NZ_CP122452.1	See Comparison
NZ_CP122449.1	See Comparison
NZ_CP028321.1	See Comparison
NZ_OZ040556.1	See Comparison
NZ_OZ038880.1	See Comparison
NZ_OZ040275.1	See Comparison
NZ_OZ040540.1	See Comparison
NZ_OZ039821.1	See Comparison
NZ_CP146662.1	See Comparison
NZ_AP029001.1	See Comparison
CP056570.1	See Comparison
NZ_CP070065.1	See Comparison
NZ_CP070042.1	See Comparison
NZ_CP069891.1	See Comparison
NZ_CP047742.1	See Comparison
CP048858.1	See Comparison
NZ_CP116410.1	See Comparison
NZ_CP114307.1	See Comparison
NZ_CP095515.1	See Comparison
NZ_CP073622.1	See Comparison
NZ_CP076124.1	See Comparison
NZ_CP014523.1	See Comparison
NZ_CP014496.1	See Comparison
NZ_CP012634.1	See Comparison
CP007150.1	See Comparison
NC_017630.1	See Comparison
NC_013655.1	See Comparison
NC_013175.1	See Comparison
NC_007941.1	See Comparison
NZ_CP053246.1	See Comparison
NZ_CP051712.1	See Comparison
NZ_CP051736.1	See Comparison
NZ_CP051715.1	See Comparison
NZ_CP069454.1	See Comparison
NZ_CP069448.1	See Comparison
NZ_CP076688.1	See Comparison
NZ_CP014110.1	See Comparison
NZ_LR130563.1	See Comparison
NZ_CP082046.1	See Comparison
NZ_CP122455.1	See Comparison
NZ_CP122452.1	See Comparison
NZ_CP122449.1	See Comparison
CP056570.1	See Comparison
NZ_OZ040556.1	See Comparison
NZ_OZ038880.1	See Comparison
NZ_OZ040275.1	See Comparison
NZ_OZ040540.1	See Comparison
NZ_OZ039821.1	See Comparison
NZ_CP146662.1	See Comparison
NZ_AP029001.1	See Comparison
NZ_CP053246.1	See Comparison
NZ_CP047742.1	See Comparison
NZ_CP051712.1	See Comparison
NZ_CP051736.1	See Comparison
NZ_CP051715.1	See Comparison
NZ_CP069454.1	See Comparison
NZ_CP069448.1	See Comparison
NZ_CP070065.1	See Comparison
NZ_CP070042.1	See Comparison
NZ_CP069891.1	See Comparison
NZ_CP116410.1	See Comparison
CP048858.1	See Comparison
NC_013655.1	See Comparison
NZ_CP114307.1	See Comparison
NZ_CP014523.1	See Comparison
NZ_CP014496.1	See Comparison
NZ_CP012634.1	See Comparison
CP007150.1	See Comparison
NZ_CP095515.1	See Comparison
NZ_CP073622.1	See Comparison
NZ_CP076688.1	See Comparison
NZ_CP076124.1	See Comparison
NC_013175.1	See Comparison
NC_017630.1	See Comparison
NC_007941.1	See Comparison
NZ_CP028321.1	See Comparison
CP048858.1	See Comparison
NZ_LR130563.1	See Comparison
NZ_CP014110.1	See Comparison
CP056570.1	See Comparison
NZ_CP070065.1	See Comparison
NZ_CP070042.1	See Comparison
NZ_CP069891.1	See Comparison
NZ_CP069454.1	See Comparison
NZ_CP069448.1	See Comparison
NZ_CP047742.1	See Comparison
NZ_CP082046.1	See Comparison
NZ_CP122455.1	See Comparison
NZ_CP122452.1	See Comparison
NZ_CP122449.1	See Comparison
NZ_OZ040556.1	See Comparison
NZ_OZ038880.1	See Comparison
NZ_OZ040275.1	See Comparison
NZ_OZ040540.1	See Comparison
NZ_OZ039821.1	See Comparison
NZ_CP146662.1	See Comparison
NZ_AP029001.1	See Comparison
NZ_CP053246.1	See Comparison
NZ_CP051712.1	See Comparison
NZ_CP051736.1	See Comparison
NZ_CP051715.1	See Comparison
NZ_CP073622.1	See Comparison
NZ_CP116410.1	See Comparison
NZ_CP114307.1	See Comparison
NZ_CP095515.1	See Comparison
NZ_CP014523.1	See Comparison
NZ_CP076688.1	See Comparison
NZ_CP076124.1	See Comparison
NZ_CP014496.1	See Comparison
NZ_CP012634.1	See Comparison
NC_017630.1	See Comparison
CP007150.1	See Comparison
NC_013655.1	See Comparison
NC_013175.1	See Comparison
NZ_CP082046.1	See Comparison
NC_007941.1	See Comparison
NZ_CP028321.1	See Comparison
NZ_LR130563.1	See Comparison
NZ_CP014110.1	See Comparison
NZ_CP122452.1	See Comparison
NZ_CP122449.1	See Comparison
NZ_OZ040556.1	See Comparison
NZ_CP122455.1	See Comparison
NZ_OZ040540.1	See Comparison
NZ_OZ039821.1	See Comparison
NZ_OZ038880.1	See Comparison
NZ_OZ040275.1	See Comparison
NZ_CP051712.1	See Comparison
NZ_AP029001.1	See Comparison
CP056570.1	See Comparison
NZ_CP146662.1	See Comparison
NZ_CP053246.1	See Comparison
NZ_CP051736.1	See Comparison
NZ_CP051715.1	See Comparison
NZ_CP069448.1	See Comparison
NZ_CP070065.1	See Comparison
CP048858.1	See Comparison
NZ_CP070042.1	See Comparison
NZ_CP069891.1	See Comparison
NZ_CP069454.1	See Comparison
NZ_CP073622.1	See Comparison
NZ_CP047742.1	See Comparison
NZ_CP116410.1	See Comparison
NZ_CP114307.1	See Comparison
NZ_CP095515.1	See Comparison
NZ_CP076688.1	See Comparison
NZ_CP076124.1	See Comparison
NZ_CP014110.1	See Comparison
CP007150.1	See Comparison
NZ_CP014523.1	See Comparison
NZ_CP014496.1	See Comparison
NZ_CP012634.1	See Comparison
NC_017630.1	See Comparison
NC_013655.1	See Comparison
NC_013175.1	See Comparison
NC_007941.1	See Comparison
NZ_CP028321.1	See Comparison
NZ_LR130563.1	See Comparison
NZ_OZ040556.1	See Comparison
NZ_CP082046.1	See Comparison
NZ_CP122455.1	See Comparison
NZ_CP122452.1	See Comparison
NZ_CP122449.1	See Comparison
NZ_OZ039821.1	See Comparison
NZ_OZ038880.1	See Comparison
NZ_OZ040275.1	See Comparison
NZ_OZ040540.1	See Comparison
NZ_AP029001.1	See Comparison
NZ_CP146662.1	See Comparison
NZ_CP069454.1	See Comparison
NZ_CP053246.1	See Comparison
NZ_CP051712.1	See Comparison
NZ_CP051736.1	See Comparison
NZ_CP051715.1	See Comparison
NZ_CP070065.1	See Comparison
NZ_CP070042.1	See Comparison
NZ_CP069891.1	See Comparison
CP056570.1	See Comparison
NZ_CP069448.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore