Plasmid NZ_CP048346.1

Sequence

Nucleotide Information

Accession	NZ_CP048346.1
Description	Escherichia coli strain 124 plasmid p124_B-OXA181, complete sequence
Source	refseq
Topology	circular
Length	51466 bp
GC Content	0.46 %
Created at NCBI	Feb. 20, 2020

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Escherichia coli (562)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Escherichia (561)
Species	Escherichia_coli (562)
Strain

Assembly

Genome Data Information

Accession	GCF_010365465.1
Assembly Coverage	80

Biosample

Curated Collection Information

Accession	13951920

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	Switzerland
Original Query Type	name
Coordinates (Lat/Lon)	46.80/8.23
Address	Switzerland

ECOSYSTEM

Original Query	cell culture,environment
Classification	cell_culture
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

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NZ_CP068922.1	See Comparison
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NZ_CP041033.1	See Comparison
NZ_CP048009.1	See Comparison
NZ_CP068911.1	See Comparison
NZ_CP068938.1	See Comparison
NZ_CP048327.1	See Comparison
NZ_CP048325.1	See Comparison
NZ_CP048321.1	See Comparison
NZ_CP068957.1	See Comparison
NZ_CP068958.1	See Comparison
NZ_CP068959.1	See Comparison
NZ_CP068919.1	See Comparison
LC483179.2	See Comparison
NZ_CP068881.1	See Comparison
NZ_CP068904.1	See Comparison
NZ_CP068936.1	See Comparison
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NZ_CP068328.1	See Comparison
NZ_CP068330.1	See Comparison
NZ_CP068325.1	See Comparison
NZ_CP068322.1	See Comparison
NZ_CP068925.1	See Comparison
NZ_CP068852.1	See Comparison
NZ_CP068910.1	See Comparison
NZ_CP068887.1	See Comparison
NZ_CP061110.1	See Comparison
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NZ_CP086533.1	See Comparison
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NZ_CP102080.1	See Comparison
NZ_CP096177.1	See Comparison
NZ_CP086521.1	See Comparison
NZ_CP058945.1	See Comparison
NZ_CP076530.1	See Comparison
NZ_CP080367.1	See Comparison
NZ_CP048918.1	See Comparison
NZ_CP076308.1	See Comparison
NZ_CP076319.1	See Comparison
NZ_CP043335.1	See Comparison
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NZ_CP081309.1	See Comparison
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NZ_CP023897.1	See Comparison
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NZ_CP114988.1	See Comparison
NZ_CP115019.1	See Comparison
NZ_CP115002.1	See Comparison
NZ_CP115013.1	See Comparison
NZ_CP114982.1	See Comparison
NZ_CP114998.1	See Comparison
NZ_CP114995.1	See Comparison
NZ_CP131963.1	See Comparison
NZ_CP110780.1	See Comparison
NZ_CP092280.1	See Comparison
NZ_CP104690.2	See Comparison
NZ_CP141739.1	See Comparison
NZ_CP144135.1	See Comparison
NZ_CP154607.1	See Comparison
NZ_CP127495.1	See Comparison
NZ_CP141734.1	See Comparison
NZ_CP141544.1	See Comparison
NZ_CP139031.1	See Comparison
NZ_CP141549.1	See Comparison
NZ_CP142408.1	See Comparison
NZ_CP139787.1	See Comparison
NZ_MK412917.1	See Comparison
NZ_MK416154.1	See Comparison
NZ_MK412919.1	See Comparison
NZ_MK412918.1	See Comparison
NZ_MK412916.1	See Comparison
NZ_MK412920.1	See Comparison
NZ_MK412915.1	See Comparison
NZ_KX523903.1	See Comparison
NZ_MG702491.1	See Comparison
NZ_KP400525.1	See Comparison
NZ_MG893567.1	See Comparison
NZ_KX894452.1	See Comparison
NZ_CP048327.1	See Comparison
NZ_CP053726.1	See Comparison
NZ_CP050375.1	See Comparison
NZ_KT005457.1	See Comparison
NZ_AP018836.1	See Comparison
NZ_AP018831.1	See Comparison
NZ_AP018838.1	See Comparison
NZ_AP018837.1	See Comparison
NZ_CP048332.1	See Comparison
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NZ_CP068911.1	See Comparison
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NZ_CP068959.1	See Comparison
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NZ_CP068904.1	See Comparison
NZ_CP068919.1	See Comparison
NZ_CP068925.1	See Comparison
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NZ_CP068910.1	See Comparison
NZ_CP068881.1	See Comparison
NZ_CP068936.1	See Comparison
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NZ_CP068328.1	See Comparison
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NZ_CP068325.1	See Comparison
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NZ_CP103490.1	See Comparison
NZ_CP102080.1	See Comparison
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NZ_CP086521.1	See Comparison
NZ_CP086527.1	See Comparison
CP090300.1	See Comparison
NZ_CP095783.1	See Comparison
NZ_CP095779.1	See Comparison
NZ_CP086533.1	See Comparison
NZ_CP086539.1	See Comparison
NZ_CP043335.1	See Comparison
NZ_CP081309.1	See Comparison
NZ_CP080367.1	See Comparison
NZ_CP048918.1	See Comparison
NZ_CP076308.1	See Comparison
NZ_CP076319.1	See Comparison
NZ_CP041931.1	See Comparison
NZ_CP042935.2	See Comparison
NZ_CP058945.1	See Comparison
LC521833.1	See Comparison
NZ_LC483179.1	See Comparison
NZ_LR595693.1	See Comparison
NZ_CP024806.1	See Comparison
NZ_CP040399.1	See Comparison
NZ_CP034284.1	See Comparison
NZ_CP026727.1	See Comparison
NZ_CP135490.1	See Comparison
NZ_CP026476.1	See Comparison
NZ_CP023897.1	See Comparison
LC778280.1	See Comparison
NZ_CP110780.1	See Comparison
NZ_CP115019.1	See Comparison
NZ_CP115002.1	See Comparison
NZ_CP115013.1	See Comparison
NZ_CP114982.1	See Comparison
NZ_CP092280.1	See Comparison
NZ_CP114998.1	See Comparison
NZ_CP114995.1	See Comparison
NZ_CP114988.1	See Comparison
NZ_OQ803525.1	See Comparison
NZ_CP131963.1	See Comparison
NZ_CP154607.1	See Comparison
NZ_CP104690.2	See Comparison
NZ_CP141739.1	See Comparison
NZ_CP144135.1	See Comparison
NZ_CP127495.1	See Comparison
NZ_CP141734.1	See Comparison
NZ_CP141544.1	See Comparison
NZ_CP139031.1	See Comparison
NZ_CP141549.1	See Comparison
NZ_CP142408.1	See Comparison
NZ_MK412920.1	See Comparison
NZ_CP139787.1	See Comparison
NZ_MK416154.1	See Comparison
NZ_MK412919.1	See Comparison
NZ_MK412918.1	See Comparison
NZ_MK412916.1	See Comparison
NZ_MK412917.1	See Comparison
NZ_MK412915.1	See Comparison
NZ_MG702491.1	See Comparison
NZ_KX894452.1	See Comparison
NZ_MG893567.1	See Comparison
NZ_CP048327.1	See Comparison
NZ_KX523903.1	See Comparison
NZ_KP400525.1	See Comparison
NZ_CP053726.1	See Comparison
NZ_CP050375.1	See Comparison
NZ_KT005457.1	See Comparison
NZ_AP018836.1	See Comparison
NZ_AP018831.1	See Comparison
NZ_AP018838.1	See Comparison
NZ_AP018837.1	See Comparison
NZ_CP048325.1	See Comparison
NZ_CP048321.1	See Comparison
NZ_CP048332.1	See Comparison
NZ_CP045195.1	See Comparison
NZ_CP068957.1	See Comparison
NZ_CP041033.1	See Comparison
NZ_CP048009.1	See Comparison
NZ_CP068958.1	See Comparison
NZ_CP068959.1	See Comparison
NZ_CP068881.1	See Comparison
NZ_CP068911.1	See Comparison
NZ_CP068938.1	See Comparison
NZ_CP068904.1	See Comparison
NZ_CP068936.1	See Comparison
NZ_CP068922.1	See Comparison
NZ_CP068919.1	See Comparison
NZ_CP068925.1	See Comparison
NZ_CP068852.1	See Comparison
NZ_CP068910.1	See Comparison
NZ_CP068887.1	See Comparison
NZ_MW080368.1	See Comparison
NZ_CP068328.1	See Comparison
NZ_CP068330.1	See Comparison
NZ_CP068325.1	See Comparison
NZ_CP068322.1	See Comparison
LC483179.2	See Comparison
NZ_MN792919.1	See Comparison
NZ_CP061110.1	See Comparison
NZ_CP058621.1	See Comparison
NZ_MG570092.1	See Comparison
NZ_MN227183.1	See Comparison
NZ_CP096177.1	See Comparison
NZ_CP104800.1	See Comparison
NZ_CP119122.1	See Comparison
NZ_OP594534.1	See Comparison
NZ_CP103490.1	See Comparison
NZ_CP102080.1	See Comparison
NZ_CP092515.1	See Comparison
NZ_CP095783.1	See Comparison
NZ_CP095779.1	See Comparison
NZ_CP080367.1	See Comparison
NZ_CP086545.1	See Comparison
NZ_CP086521.1	See Comparison
NZ_CP086527.1	See Comparison
NZ_CP086533.1	See Comparison
CP090300.1	See Comparison
NZ_CP086539.1	See Comparison
NZ_CP043335.1	See Comparison
NZ_CP081309.1	See Comparison
NZ_CP058945.1	See Comparison
NZ_CP076530.1	See Comparison
NZ_CP048918.1	See Comparison
NZ_CP076308.1	See Comparison
NZ_CP076319.1	See Comparison
LC521833.1	See Comparison
NZ_LR595693.1	See Comparison
NZ_CP042935.2	See Comparison
NZ_CP040399.1	See Comparison
NZ_CP041931.1	See Comparison
NZ_LC483179.1	See Comparison
NZ_CP024806.1	See Comparison
NZ_CP034284.1	See Comparison
NZ_CP026476.1	See Comparison
NZ_CP026727.1	See Comparison
NZ_CP023897.1	See Comparison
LC778280.1	See Comparison
NZ_CP135490.1	See Comparison
NZ_CP104690.2	See Comparison
NZ_CP115019.1	See Comparison
NZ_CP115002.1	See Comparison
NZ_CP115013.1	See Comparison
NZ_CP114982.1	See Comparison
NZ_CP092280.1	See Comparison
NZ_CP114998.1	See Comparison
NZ_CP114995.1	See Comparison
NZ_CP114988.1	See Comparison
NZ_OQ803525.1	See Comparison
NZ_CP131963.1	See Comparison
NZ_CP110780.1	See Comparison
NZ_CP144135.1	See Comparison
NZ_CP154607.1	See Comparison
NZ_CP127495.1	See Comparison
NZ_CP141739.1	See Comparison
NZ_CP141734.1	See Comparison
NZ_CP142408.1	See Comparison
NZ_MK412917.1	See Comparison
NZ_CP139787.1	See Comparison
NZ_MK416154.1	See Comparison
NZ_MK412919.1	See Comparison
NZ_MK412918.1	See Comparison
NZ_MK412916.1	See Comparison
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NZ_CP141544.1	See Comparison
NZ_CP141549.1	See Comparison
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NZ_KX523903.1	See Comparison
NZ_KP400525.1	See Comparison
NZ_KT005457.1	See Comparison
NZ_CP050375.1	See Comparison
NZ_AP018836.1	See Comparison
NZ_AP018831.1	See Comparison
NZ_AP018838.1	See Comparison
NZ_AP018837.1	See Comparison
NZ_CP045195.1	See Comparison
NZ_CP048327.1	See Comparison
NZ_CP048325.1	See Comparison
NZ_CP048321.1	See Comparison
NZ_CP048332.1	See Comparison
NZ_CP041033.1	See Comparison
NZ_CP068911.1	See Comparison
NZ_CP048009.1	See Comparison
NZ_CP068957.1	See Comparison
NZ_CP068958.1	See Comparison
NZ_CP068938.1	See Comparison
NZ_CP068959.1	See Comparison
NZ_CP068904.1	See Comparison
NZ_CP068922.1	See Comparison
NZ_CP068919.1	See Comparison
NZ_CP068936.1	See Comparison
NZ_CP068328.1	See Comparison
NZ_CP068925.1	See Comparison
NZ_CP068852.1	See Comparison
NZ_CP068910.1	See Comparison
NZ_CP068881.1	See Comparison
NZ_CP068330.1	See Comparison
NZ_CP068887.1	See Comparison
NZ_CP068325.1	See Comparison
NZ_CP068322.1	See Comparison
NZ_MN792919.1	See Comparison
LC483179.2	See Comparison
NZ_MW080368.1	See Comparison
NZ_CP061110.1	See Comparison
NZ_CP058621.1	See Comparison
NZ_MG570092.1	See Comparison
NZ_MN227183.1	See Comparison
NZ_CP096177.1	See Comparison
NZ_CP103490.1	See Comparison
NZ_CP102080.1	See Comparison
NZ_CP119122.1	See Comparison
NZ_OP594534.1	See Comparison
NZ_CP104800.1	See Comparison
NZ_CP092515.1	See Comparison
NZ_CP086545.1	See Comparison
NZ_CP095783.1	See Comparison
NZ_CP095779.1	See Comparison
NZ_CP086521.1	See Comparison
NZ_CP086527.1	See Comparison
NZ_CP086533.1	See Comparison
NZ_CP086539.1	See Comparison
NZ_CP058945.1	See Comparison
NZ_CP043335.1	See Comparison
NZ_CP081309.1	See Comparison
NZ_CP076530.1	See Comparison
CP090300.1	See Comparison
NZ_CP080367.1	See Comparison
NZ_CP048918.1	See Comparison
NZ_CP076308.1	See Comparison
NZ_CP076319.1	See Comparison
LC521833.1	See Comparison
NZ_CP041931.1	See Comparison
NZ_CP042935.2	See Comparison
NZ_LC483179.1	See Comparison
NZ_CP034284.1	See Comparison
NZ_LR595693.1	See Comparison
NZ_CP040399.1	See Comparison
NZ_CP026476.1	See Comparison
NZ_CP026727.1	See Comparison
NZ_CP023897.1	See Comparison
NZ_CP024806.1	See Comparison
NZ_CP114998.1	See Comparison
LC778280.1	See Comparison
NZ_CP135490.1	See Comparison
NZ_CP115019.1	See Comparison
NZ_CP115002.1	See Comparison
NZ_CP115013.1	See Comparison
NZ_CP114982.1	See Comparison
NZ_CP114995.1	See Comparison
NZ_CP114988.1	See Comparison
NZ_OQ803525.1	See Comparison
NZ_CP131963.1	See Comparison
NZ_CP092280.1	See Comparison
NZ_CP144135.1	See Comparison
NZ_CP154607.1	See Comparison
NZ_CP104690.2	See Comparison
NZ_CP110780.1	See Comparison
NZ_CP127495.1	See Comparison
NZ_CP141739.1	See Comparison
NZ_CP141734.1	See Comparison
NZ_CP141544.1	See Comparison
NZ_CP141549.1	See Comparison
NZ_CP142408.1	See Comparison
NZ_CP139031.1	See Comparison
NZ_MK412920.1	See Comparison
NZ_CP139787.1	See Comparison
NZ_MK416154.1	See Comparison
NZ_MK412919.1	See Comparison
NZ_MK412918.1	See Comparison
NZ_MK412916.1	See Comparison
NZ_MK412915.1	See Comparison
NZ_MG702491.1	See Comparison
NZ_MK412917.1	See Comparison
NZ_CP053726.1	See Comparison
NZ_KX894452.1	See Comparison
NZ_MG893567.1	See Comparison
NZ_KX523903.1	See Comparison
NZ_KP400525.1	See Comparison
NZ_CP050375.1	See Comparison
NZ_KT005457.1	See Comparison
NZ_CP041033.1	See Comparison
NZ_AP018836.1	See Comparison
NZ_AP018831.1	See Comparison
NZ_AP018838.1	See Comparison
NZ_AP018837.1	See Comparison
NZ_CP048327.1	See Comparison
NZ_CP048325.1	See Comparison
NZ_CP048321.1	See Comparison
NZ_CP048332.1	See Comparison
NZ_CP068957.1	See Comparison
NZ_CP068958.1	See Comparison
NZ_CP068959.1	See Comparison
NZ_CP045195.1	See Comparison
NZ_CP048009.1	See Comparison
NZ_CP068911.1	See Comparison
NZ_CP068881.1	See Comparison
NZ_CP068938.1	See Comparison
NZ_CP068922.1	See Comparison
NZ_CP068919.1	See Comparison
NZ_CP068328.1	See Comparison
NZ_CP068925.1	See Comparison
NZ_CP068852.1	See Comparison
NZ_CP068910.1	See Comparison
NZ_CP068887.1	See Comparison
LC483179.2	See Comparison
NZ_CP068904.1	See Comparison
NZ_CP068936.1	See Comparison
NZ_CP068330.1	See Comparison
NZ_CP068325.1	See Comparison
NZ_CP068322.1	See Comparison
NZ_CP061110.1	See Comparison
NZ_CP058621.1	See Comparison
NZ_MW080368.1	See Comparison
NZ_MG570092.1	See Comparison
NZ_CP103490.1	See Comparison
NZ_MN792919.1	See Comparison
NZ_MN227183.1	See Comparison
NZ_CP104800.1	See Comparison
NZ_CP119122.1	See Comparison
NZ_OP594534.1	See Comparison
NZ_CP102080.1	See Comparison
NZ_CP095783.1	See Comparison
NZ_CP096177.1	See Comparison
NZ_CP092515.1	See Comparison
NZ_CP095779.1	See Comparison
NZ_CP043335.1	See Comparison
NZ_CP086545.1	See Comparison
NZ_CP086521.1	See Comparison
NZ_CP086527.1	See Comparison
NZ_CP086533.1	See Comparison
NZ_CP086539.1	See Comparison
NZ_CP048918.1	See Comparison
NZ_CP080367.1	See Comparison
CP090300.1	See Comparison
NZ_CP081309.1	See Comparison
NZ_CP076530.1	See Comparison
NZ_CP076308.1	See Comparison
NZ_CP076319.1	See Comparison
NZ_CP042935.2	See Comparison
NZ_CP058945.1	See Comparison
LC521833.1	See Comparison
NZ_CP040399.1	See Comparison
NZ_CP041931.1	See Comparison
NZ_LC483179.1	See Comparison
NZ_LR595693.1	See Comparison
NZ_CP024806.1	See Comparison
NZ_CP034284.1	See Comparison
NZ_CP026476.1	See Comparison
NZ_CP026727.1	See Comparison
NZ_CP114982.1	See Comparison
NZ_CP023897.1	See Comparison
NZ_CP114998.1	See Comparison
NZ_CP114995.1	See Comparison
NZ_CP114988.1	See Comparison
NZ_CP115019.1	See Comparison
NZ_CP115002.1	See Comparison
NZ_CP115013.1	See Comparison
NZ_CP135490.1	See Comparison
LC778280.1	See Comparison
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NZ_OQ803525.1	See Comparison
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NZ_CP154607.1	See Comparison
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NZ_CP104690.2	See Comparison
NZ_MK412917.1	See Comparison
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NZ_MK412919.1	See Comparison
NZ_MK412918.1	See Comparison
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NZ_MK412920.1	See Comparison
NZ_MK412915.1	See Comparison
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NZ_KX523903.1	See Comparison
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NZ_KT005457.1	See Comparison
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NZ_AP018831.1	See Comparison
NZ_AP018838.1	See Comparison
NZ_AP018837.1	See Comparison
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NZ_CP068936.1	See Comparison
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LC483179.2	See Comparison
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Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore