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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP027201.2
Sequence
Nucleotide Information
Accession
NZ_CP027201.2
Description
Escherichia coli strain WCHEC025943 plasmid p3_025943, complete sequence
Source
refseq
Topology
circular
Length
2088 bp
GC Content
0.47 %
Created at NCBI
Feb. 27, 2018
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (562)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Assembly
Genome Data Information
Accession
GCF_002811555.3
Assembly Coverage
200
Biosample
Curated Collection Information
Accession
7510673
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
China,Sichuan,Chengdu
Original Query Type
name
Coordinates (Lat/Lon)
30.68/104.06
Address
China,Sichuan,Chengdu
ECOSYSTEM
Original Query
Culture,Sewage
Classification
cell_culture,sewage,wastewater
Host-associated Taxon
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_MF678351.1
NZ_CP027204.2
NZ_CP027203.2
NZ_CP027202.2
NZ_CP027200.1
NZ_CP027199.1
Similar Plasmids
based on Mash distance
NZ_CP048348.1
See Comparison
NZ_CP048378.1
See Comparison
NZ_CP048013.1
See Comparison
NZ_CP043341.1
See Comparison
NZ_OW967804.1
See Comparison
NZ_CP103652.1
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NZ_CP081310.1
See Comparison
NZ_CP085191.1
See Comparison
NZ_CP082126.1
See Comparison
NZ_CP080374.1
See Comparison
NZ_LR595694.1
See Comparison
NZ_CP048919.1
See Comparison
NZ_CP048348.1
See Comparison
NZ_CP034955.1
See Comparison
NZ_CP033398.1
See Comparison
NZ_CP024803.1
See Comparison
NZ_CP123039.1
See Comparison
NZ_CP123034.1
See Comparison
NZ_CP123016.1
See Comparison
NZ_CP123027.1
See Comparison
NZ_CP123022.1
See Comparison
NZ_CP048378.1
See Comparison
NZ_OW967804.1
See Comparison
NZ_CP103652.1
See Comparison
NZ_CP048013.1
See Comparison
NZ_CP048919.1
See Comparison
NZ_CP043341.1
See Comparison
NZ_CP085191.1
See Comparison
NZ_CP082126.1
See Comparison
NZ_CP081310.1
See Comparison
NZ_CP080374.1
See Comparison
NZ_CP034955.1
See Comparison
NZ_LR595694.1
See Comparison
NZ_CP033398.1
See Comparison
NZ_CP024803.1
See Comparison
NZ_CP048013.1
See Comparison
NZ_CP123039.1
See Comparison
NZ_CP123034.1
See Comparison
NZ_CP123016.1
See Comparison
NZ_CP123027.1
See Comparison
NZ_CP123022.1
See Comparison
NZ_CP048348.1
See Comparison
NZ_CP048378.1
See Comparison
NZ_CP085191.1
See Comparison
NZ_OW967804.1
See Comparison
NZ_CP043341.1
See Comparison
NZ_CP103652.1
See Comparison
NZ_CP082126.1
See Comparison
NZ_CP048919.1
See Comparison
NZ_CP080374.1
See Comparison
NZ_CP081310.1
See Comparison
NZ_CP034955.1
See Comparison
NZ_LR595694.1
See Comparison
NZ_CP033398.1
See Comparison
NZ_CP024803.1
See Comparison
NZ_CP123039.1
See Comparison
NZ_CP123034.1
See Comparison
NZ_CP123016.1
See Comparison
NZ_CP123027.1
See Comparison
NZ_CP123022.1
See Comparison
NZ_CP048348.1
See Comparison
NZ_CP048378.1
See Comparison
NZ_CP081310.1
See Comparison
NZ_CP048013.1
See Comparison
NZ_CP043341.1
See Comparison
NZ_CP082126.1
See Comparison
NZ_CP103652.1
See Comparison
NZ_OW967804.1
See Comparison
NZ_CP085191.1
See Comparison
NZ_CP080374.1
See Comparison
NZ_CP027201.2
See Comparison
NZ_CP048919.1
See Comparison
NZ_CP034955.1
See Comparison
NZ_CP033398.1
See Comparison
NZ_LR595694.1
See Comparison
NZ_CP048378.1
See Comparison
NZ_CP024803.1
See Comparison
NZ_CP123039.1
See Comparison
NZ_CP123034.1
See Comparison
NZ_CP123016.1
See Comparison
NZ_CP123027.1
See Comparison
NZ_CP123022.1
See Comparison
NZ_CP048013.1
See Comparison
NZ_CP048348.1
See Comparison
NZ_CP043341.1
See Comparison
NZ_CP103652.1
See Comparison
NZ_OW967804.1
See Comparison
NZ_CP081310.1
See Comparison
NZ_CP085191.1
See Comparison
NZ_CP082126.1
See Comparison
NZ_CP080374.1
See Comparison
NZ_CP048919.1
See Comparison
NZ_LR595694.1
See Comparison
NZ_CP034955.1
See Comparison
NZ_CP033398.1
See Comparison
NZ_CP085191.1
See Comparison
NZ_CP024803.1
See Comparison
NZ_CP123039.1
See Comparison
NZ_CP123034.1
See Comparison
NZ_CP123016.1
See Comparison
NZ_CP123027.1
See Comparison
NZ_CP123022.1
See Comparison
NZ_CP048348.1
See Comparison
NZ_CP103652.1
See Comparison
NZ_OW967804.1
See Comparison
NZ_CP043341.1
See Comparison
NZ_CP048378.1
See Comparison
NZ_CP048013.1
See Comparison
NZ_CP082126.1
See Comparison
NZ_CP081310.1
See Comparison
NZ_CP034955.1
See Comparison
NZ_CP080374.1
See Comparison
NZ_CP048919.1
See Comparison
NZ_LR595694.1
See Comparison
NZ_CP033398.1
See Comparison
NZ_CP024803.1
See Comparison
NZ_CP123039.1
See Comparison
NZ_CP123034.1
See Comparison
NZ_CP123016.1
See Comparison
NZ_CP123027.1
See Comparison
NZ_CP123022.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore