Plasmid NZ_CP018444.1

Sequence

Nucleotide Information

Accession	NZ_CP018444.1
Description	Klebsiella pneumoniae strain Kp_Goe_822917 plasmid pKp_Goe_917-5, complete sequence
Source	refseq
Topology	circular
Length	5234 bp
GC Content	0.50 %
Created at NCBI	Dec. 19, 2016

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (573)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_001902415.1
Assembly Coverage	117

Biosample

Curated Collection Information

Accession	5412453

PLASMID INFORMATION

Genotype	MLST ST11

GEOGRAPHICAL INFORMATION

Original Query	51.53919016N;9.91156249E
Original Query Type	coordinates
Coordinates (Lat/Lon)	51.54/9.91
Address	Königsstieg, Egelsberg, Weststadt, Göttingen, Landkreis Göttingen, Lower Saxony, 37081, Germany

ECOSYSTEM

Original Query	Homo sapiens,skin swab
Classification	host_associated
Host-associated Taxon	Homo sapiens (9606)
Host-associated Age	49
Host-associated Sex	male

DISEASE

Original Query	colonization
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP150008.1	See Comparison
NZ_CP144707.1	See Comparison
NZ_CP143283.1	See Comparison
NZ_CP101895.1	See Comparison
NZ_AP026528.1	See Comparison
NZ_CP101902.1	See Comparison
NZ_CP102901.1	See Comparison
OW968151.1	See Comparison
NZ_CP102907.1	See Comparison
OW849074.1	See Comparison
OW968004.1	See Comparison
OW848961.1	See Comparison
OW848950.1	See Comparison
OW848943.1	See Comparison
OW848936.1	See Comparison
OW848925.1	See Comparison
OW848911.1	See Comparison
OW849027.1	See Comparison
OW849020.1	See Comparison
OW848992.1	See Comparison
NZ_CP027040.1	See Comparison
NZ_CP080356.1	See Comparison
NC_019988.1	See Comparison
CP139236.1	See Comparison
CP139230.1	See Comparison
NZ_CP144707.1	See Comparison
NZ_CP135484.1	See Comparison
CP128763.1	See Comparison
NZ_CP150008.1	See Comparison
NZ_CP102907.1	See Comparison
NZ_CP101895.1	See Comparison
NZ_CP101902.1	See Comparison
NZ_CP102901.1	See Comparison
NZ_CP143283.1	See Comparison
NZ_AP026528.1	See Comparison
OW968004.1	See Comparison
OW968151.1	See Comparison
OW849074.1	See Comparison
OW848961.1	See Comparison
OW848950.1	See Comparison
OW848943.1	See Comparison
OW848936.1	See Comparison
OW848925.1	See Comparison
OW848911.1	See Comparison
OW849027.1	See Comparison
OW849020.1	See Comparison
OW848992.1	See Comparison
NC_019988.1	See Comparison
NZ_CP080356.1	See Comparison
NZ_CP027040.1	See Comparison
NZ_CP135484.1	See Comparison
CP139236.1	See Comparison
CP139230.1	See Comparison
NZ_CP143283.1	See Comparison
NZ_CP150008.1	See Comparison
CP128763.1	See Comparison
NZ_CP144707.1	See Comparison
OW848961.1	See Comparison
NZ_AP026528.1	See Comparison
NZ_CP101895.1	See Comparison
NZ_CP101902.1	See Comparison
NZ_CP102901.1	See Comparison
OW968151.1	See Comparison
NZ_CP102907.1	See Comparison
OW968004.1	See Comparison
OW848950.1	See Comparison
OW848943.1	See Comparison
OW848936.1	See Comparison
OW848925.1	See Comparison
OW848911.1	See Comparison
NZ_CP080356.1	See Comparison
OW849074.1	See Comparison
OW849027.1	See Comparison
OW849020.1	See Comparison
OW848992.1	See Comparison
NC_019988.1	See Comparison
NZ_CP018444.1	See Comparison
NZ_CP143283.1	See Comparison
NZ_CP135484.1	See Comparison
NZ_CP150008.1	See Comparison
NZ_CP027040.1	See Comparison
CP139236.1	See Comparison
CP139230.1	See Comparison
CP128763.1	See Comparison
NZ_CP144707.1	See Comparison
NZ_AP026528.1	See Comparison
NZ_CP101895.1	See Comparison
NZ_CP101902.1	See Comparison
OW968004.1	See Comparison
NZ_CP102901.1	See Comparison
NZ_CP102907.1	See Comparison
OW968151.1	See Comparison
OW848961.1	See Comparison
OW848925.1	See Comparison
OW848911.1	See Comparison
OW848950.1	See Comparison
OW848943.1	See Comparison
OW848936.1	See Comparison
NZ_CP027040.1	See Comparison
NZ_CP080356.1	See Comparison
NC_019988.1	See Comparison
OW849074.1	See Comparison
OW849027.1	See Comparison
OW849020.1	See Comparison
OW848992.1	See Comparison
NZ_CP101895.1	See Comparison
CP139236.1	See Comparison
CP139230.1	See Comparison
CP128763.1	See Comparison
NZ_CP144707.1	See Comparison
NZ_CP143283.1	See Comparison
NZ_AP026528.1	See Comparison
NZ_CP135484.1	See Comparison
NZ_CP150008.1	See Comparison
NZ_CP101902.1	See Comparison
OW849027.1	See Comparison
OW968151.1	See Comparison
OW848911.1	See Comparison
NZ_CP102901.1	See Comparison
NZ_CP102907.1	See Comparison
OW968004.1	See Comparison
OW848961.1	See Comparison
OW848950.1	See Comparison
OW848943.1	See Comparison
OW848936.1	See Comparison
OW848925.1	See Comparison
OW849020.1	See Comparison
OW848992.1	See Comparison
NC_019988.1	See Comparison
OW849074.1	See Comparison
NZ_CP080356.1	See Comparison
NZ_CP027040.1	See Comparison
NZ_CP144707.1	See Comparison
CP128763.1	See Comparison
CP139236.1	See Comparison
CP139230.1	See Comparison
NZ_CP135484.1	See Comparison
NZ_CP150008.1	See Comparison
NZ_CP101895.1	See Comparison
NZ_AP026528.1	See Comparison
NZ_CP143283.1	See Comparison
NZ_CP101902.1	See Comparison
OW968004.1	See Comparison
OW968151.1	See Comparison
NZ_CP102901.1	See Comparison
NZ_CP102907.1	See Comparison
OW849074.1	See Comparison
OW848961.1	See Comparison
OW848950.1	See Comparison
OW848943.1	See Comparison
OW848936.1	See Comparison
OW848925.1	See Comparison
OW848911.1	See Comparison
OW849027.1	See Comparison
OW849020.1	See Comparison
OW848992.1	See Comparison
NZ_CP080356.1	See Comparison
NZ_CP027040.1	See Comparison
NC_019988.1	See Comparison
NZ_CP135484.1	See Comparison
CP139236.1	See Comparison
CP139230.1	See Comparison
CP128763.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore