Plasmid NZ_CP101902.1

Sequence

Nucleotide Information

Accession NZ_CP101902.1
Description Klebsiella pneumoniae strain 4011 plasmid pCol440II_4011, complete sequence
Source refseq
Topology circular
Length 5207 bp
GC Content 0.50 %
Created at NCBI Sept. 27, 2022



Biosample

Curated Collection Information
Accession 29397003

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 41.53N;12.30E
Original Query Type coordinates
Coordinates (Lat/Lon) 41.53/12.30
Address Italy

ECOSYSTEM
Original Query Homo sapiens,urine
Classification host_associated,urinary_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query Urinary Tract Infection
DOID/SYMP
  • Urinary tract infection (DOID:0080784 )
    • An urinary system disease that is characterized by an infection in any part of the urinary system, including the kidneys, ureters, bladder or urethra.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP128763.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_CP102907.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP101895.1 See Comparison
OW968004.1 See Comparison
OW968151.1 See Comparison
OW848961.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
NZ_CP018444.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_CP080356.1 See Comparison
NZ_CP027040.1 See Comparison
NC_019988.1 See Comparison
CP128763.1 See Comparison
NZ_CP135484.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP101895.1 See Comparison
OW968151.1 See Comparison
NZ_CP102907.1 See Comparison
NZ_CP080356.1 See Comparison
OW968004.1 See Comparison
OW848961.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP018444.1 See Comparison
NC_019988.1 See Comparison
CP128763.1 See Comparison
NZ_CP027040.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
NZ_CP135484.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_CP101895.1 See Comparison
NZ_CP102907.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_CP018444.1 See Comparison
OW968004.1 See Comparison
OW848961.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP080356.1 See Comparison
OW968151.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
CP128763.1 See Comparison
NC_019988.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
NZ_CP135484.1 See Comparison
NZ_CP027040.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_CP101895.1 See Comparison
OW968151.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_CP102907.1 See Comparison
OW848961.1 See Comparison
OW968004.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
OW848950.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP080356.1 See Comparison
NZ_CP018444.1 See Comparison
NZ_CP027040.1 See Comparison
NC_019988.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
NZ_CP135484.1 See Comparison
OW968151.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_CP102907.1 See Comparison
CP128763.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_CP101895.1 See Comparison
OW848961.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
OW968004.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP018444.1 See Comparison
NZ_CP080356.1 See Comparison
NZ_CP027040.1 See Comparison
NC_019988.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP135484.1 See Comparison
CP128763.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_CP101895.1 See Comparison
NZ_CP101902.1 See Comparison
NZ_CP102907.1 See Comparison
OW848911.1 See Comparison
OW968151.1 See Comparison
OW968004.1 See Comparison
OW849074.1 See Comparison
OW848961.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP080356.1 See Comparison
NZ_CP027040.1 See Comparison
NZ_CP018444.1 See Comparison
NC_019988.1 See Comparison
NZ_CP135484.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore