Plasmid NZ_CP018440.1

Sequence

Nucleotide Information

Accession	NZ_CP018440.1
Description	Klebsiella pneumoniae strain Kp_Goe_822917 plasmid pKp_Goe_917-6, complete sequence
Source	refseq
Topology	circular
Length	4510 bp
GC Content	0.45 %
Created at NCBI	Dec. 19, 2016

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (573)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_001902415.1
Assembly Coverage	117

Biosample

Curated Collection Information

Accession	5412453

PLASMID INFORMATION

Genotype	MLST ST11

GEOGRAPHICAL INFORMATION

Original Query	51.53919016N;9.91156249E
Original Query Type	coordinates
Coordinates (Lat/Lon)	51.54/9.91
Address	Königsstieg, Egelsberg, Weststadt, Göttingen, Landkreis Göttingen, Lower Saxony, 37081, Germany

ECOSYSTEM

Original Query	Homo sapiens,skin swab
Classification	host_associated
Host-associated Taxon	Homo sapiens (9606)
Host-associated Age	49
Host-associated Sex	male

DISEASE

Original Query	colonization
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

CP128764.1	See Comparison
NZ_CP150009.1	See Comparison
NZ_CP144709.1	See Comparison
NZ_CP045682.1	See Comparison
NZ_CP091989.1	See Comparison
NZ_CP100082.1	See Comparison
NZ_CP097393.1	See Comparison
NZ_CP091989.1	See Comparison
NZ_CP079732.1	See Comparison
NZ_CP150009.1	See Comparison
NZ_CP144709.1	See Comparison
NZ_CP045682.1	See Comparison
NZ_CP097393.1	See Comparison
NZ_CP024561.1	See Comparison
NZ_CP024540.1	See Comparison
NZ_CP024533.1	See Comparison
NZ_CP024526.1	See Comparison
NZ_CP024554.1	See Comparison
NZ_CP024568.1	See Comparison
NZ_CP024196.1	See Comparison
CP128764.1	See Comparison
NZ_CP100082.1	See Comparison
NZ_CP144709.1	See Comparison
NZ_CP079732.1	See Comparison
CP128764.1	See Comparison
NZ_CP024561.1	See Comparison
NZ_CP024540.1	See Comparison
NZ_CP024533.1	See Comparison
NZ_CP024526.1	See Comparison
NZ_CP024554.1	See Comparison
NZ_CP024568.1	See Comparison
NZ_CP024196.1	See Comparison
NZ_CP150009.1	See Comparison
NZ_CP045682.1	See Comparison
NZ_CP097393.1	See Comparison
NZ_CP100082.1	See Comparison
NZ_CP100082.1	See Comparison
NZ_CP079732.1	See Comparison
NZ_CP150009.1	See Comparison
NZ_CP045682.1	See Comparison
NZ_CP091989.1	See Comparison
NZ_CP024561.1	See Comparison
NZ_CP024540.1	See Comparison
NZ_CP024533.1	See Comparison
NZ_CP024526.1	See Comparison
NZ_CP024554.1	See Comparison
NZ_CP024568.1	See Comparison
NZ_CP024196.1	See Comparison
CP128764.1	See Comparison
NZ_CP144709.1	See Comparison
NZ_CP144709.1	See Comparison
NZ_CP097393.1	See Comparison
NZ_CP091989.1	See Comparison
NZ_CP079732.1	See Comparison
NZ_CP024561.1	See Comparison
NZ_CP024540.1	See Comparison
NZ_CP024533.1	See Comparison
NZ_CP024526.1	See Comparison
NZ_CP024554.1	See Comparison
NZ_CP024568.1	See Comparison
NZ_CP024196.1	See Comparison
CP128764.1	See Comparison
NZ_CP018440.1	See Comparison
NZ_CP150009.1	See Comparison
NZ_CP097393.1	See Comparison
NZ_CP045682.1	See Comparison
NZ_CP100082.1	See Comparison
NZ_CP144709.1	See Comparison
NZ_CP091989.1	See Comparison
NZ_CP150009.1	See Comparison
NZ_CP079732.1	See Comparison
NZ_CP024561.1	See Comparison
NZ_CP024540.1	See Comparison
NZ_CP024533.1	See Comparison
NZ_CP024526.1	See Comparison
NZ_CP024554.1	See Comparison
NZ_CP024568.1	See Comparison
NZ_CP024196.1	See Comparison
CP128764.1	See Comparison
NZ_CP024196.1	See Comparison
NZ_CP097393.1	See Comparison
NZ_CP079732.1	See Comparison
NZ_CP024561.1	See Comparison
NZ_CP024540.1	See Comparison
NZ_CP024533.1	See Comparison
NZ_CP024526.1	See Comparison
NZ_CP024554.1	See Comparison
NZ_CP045682.1	See Comparison
NZ_CP100082.1	See Comparison
NZ_CP091989.1	See Comparison
NZ_CP024568.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore